RNA–Protein interactions for RNA: ENST00000356000.7

RTN3-205, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 2,645 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-205ENST00000356000 RHOBTB3O94955 611 aa16.87■□□□□ 0.29
RTN3-205ENST00000356000 ATP2C1P98194 919 aaPredicted RBP16.87■□□□□ 0.29
RTN3-205ENST00000356000 MAP3K10Q02779 954 aa16.87■□□□□ 0.29
RTN3-205ENST00000356000 ZNF449Q6P9G9 518 aa16.87■□□□□ 0.29
RTN3-205ENST00000356000 SAPCD2Q86UD0 394 aa16.87■□□□□ 0.29
RTN3-205ENST00000356000 CCDC84Q86UT8 332 aaPredicted RBP16.87■□□□□ 0.29
RTN3-205ENST00000356000 PALB2Q86YC2 1186 aa16.87■□□□□ 0.29
RTN3-205ENST00000356000 P2RX5Q93086 422 aa16.87■□□□□ 0.29
RTN3-205ENST00000356000 AXIN2Q9Y2T1 843 aa16.87■□□□□ 0.29
RTN3-205ENST00000356000 BTAF1O14981 1849 aa16.87■□□□□ 0.29
RTN3-205ENST00000356000 HNRNPCL1O60812 293 aaKnown RBP16.86■□□□□ 0.29
RTN3-205ENST00000356000 DCTN3O75935 186 aa16.86■□□□□ 0.29
RTN3-205ENST00000356000 IFIT1P09914 478 aaKnown RBP16.86■□□□□ 0.29
RTN3-205ENST00000356000 GRIA2P42262 883 aa16.86■□□□□ 0.29
RTN3-205ENST00000356000 SLC9C1Q4G0N8 1177 aa16.86■□□□□ 0.29
RTN3-205ENST00000356000 VWA3BQ502W6 1294 aa16.86■□□□□ 0.29
RTN3-205ENST00000356000 EARS2Q5JPH6 523 aaKnown RBP16.86■□□□□ 0.29
RTN3-205ENST00000356000 ANKRD40Q6AI12 368 aa16.86■□□□□ 0.29
RTN3-205ENST00000356000 TBC1D10CQ8IV04 446 aa16.86■□□□□ 0.29
RTN3-205ENST00000356000 FNDC8Q8TC99 324 aa16.86■□□□□ 0.29
RTN3-205ENST00000356000 GFM2Q969S9 779 aaKnown RBP16.86■□□□□ 0.29
RTN3-205ENST00000356000 CRAMP1Q96RY5 1269 aa16.86■□□□□ 0.29
RTN3-205ENST00000356000 HNRNPABQ99729 332 aaKnown RBP16.86■□□□□ 0.29
RTN3-205ENST00000356000 MIPEPQ99797 713 aa16.86■□□□□ 0.29
RTN3-205ENST00000356000 TCHPQ9BT92 498 aa16.86■□□□□ 0.29
RTN3-205ENST00000356000 ROPN1BQ9BZX4 212 aaPredicted RBP16.86■□□□□ 0.29
RTN3-205ENST00000356000 SEMA4AQ9H3S1 761 aa16.86■□□□□ 0.29
RTN3-205ENST00000356000 ROPN1Q9HAT0 212 aaPredicted RBP16.86■□□□□ 0.29
RTN3-205ENST00000356000 CLIC5Q9NZA1 410 aa16.86■□□□□ 0.29
RTN3-205ENST00000356000 SLC12A7Q9Y666 1083 aa16.86■□□□□ 0.29
RTN3-205ENST00000356000 LIFRP42702 1097 aa16.86■□□□□ 0.29
RTN3-205ENST00000356000 B3GNT6Q6ZMB0 384 aa16.86■□□□□ 0.29
RTN3-205ENST00000356000 OGFOD1Q8N543 542 aa16.86■□□□□ 0.29
RTN3-205ENST00000356000 GDAP1Q8TB36 358 aa16.86■□□□□ 0.29
RTN3-205ENST00000356000 IP6K1Q92551 441 aa16.86■□□□□ 0.29
RTN3-205ENST00000356000 ESR2Q92731 530 aa16.86■□□□□ 0.29
RTN3-205ENST00000356000 ERP44Q9BS26 406 aa16.86■□□□□ 0.29
RTN3-205ENST00000356000 TRAIPQ9BWF2 469 aa16.86■□□□□ 0.29
RTN3-205ENST00000356000 PITPNM3Q9BZ71 974 aa16.86■□□□□ 0.29
RTN3-205ENST00000356000 NPHP3-ACAD11A0A0J9YXS1 232 aa16.85■□□□□ 0.29
RTN3-205ENST00000356000 IPO5O00410 1097 aaKnown RBP16.85■□□□□ 0.29
RTN3-205ENST00000356000 CBX6O95503 412 aa16.85■□□□□ 0.29
RTN3-205ENST00000356000 SERPING1P05155 500 aa16.85■□□□□ 0.29
RTN3-205ENST00000356000 CREB1P16220 341 aa16.85■□□□□ 0.29
RTN3-205ENST00000356000 GNAT2P19087 354 aa16.85■□□□□ 0.29
RTN3-205ENST00000356000 HALP42357 657 aa16.85■□□□□ 0.29
RTN3-205ENST00000356000 ADRM1Q16186 407 aa16.85■□□□□ 0.29
RTN3-205ENST00000356000 SLC18A3Q16572 532 aa16.85■□□□□ 0.29
RTN3-205ENST00000356000 EAPPQ56P03 285 aaPredicted RBP16.85■□□□□ 0.29
RTN3-205ENST00000356000 TMEM67Q5HYA8 995 aa16.85■□□□□ 0.29
RTN3-205ENST00000356000 ZDHHC24Q6UX98 284 aa16.85■□□□□ 0.29
RTN3-205ENST00000356000 ARHGAP27Q6ZUM4 889 aa16.85■□□□□ 0.29
RTN3-205ENST00000356000 PTF1AQ7RTS3 328 aa16.85■□□□□ 0.29
RTN3-205ENST00000356000 TRIM50Q86XT4 487 aa16.85■□□□□ 0.29
RTN3-205ENST00000356000 ARHGEF2Q92974 986 aaKnown RBP16.85■□□□□ 0.29
RTN3-205ENST00000356000 HESX1Q9UBX0 185 aa16.85■□□□□ 0.29
RTN3-205ENST00000356000 STARD13Q9Y3M8 1113 aa16.85■□□□□ 0.29
RTN3-205ENST00000356000 PITPNM2Q9BZ72 1349 aa16.85■□□□□ 0.29
RTN3-205ENST00000356000 TMEM110-MUSTN1A8MSY1 372 aa16.85■□□□□ 0.29
RTN3-205ENST00000356000 RNASEH1O60930 286 aaKnown RBP16.85■□□□□ 0.29
RTN3-205ENST00000356000 DDX58O95786 925 aaKnown RBP16.85■□□□□ 0.29
RTN3-205ENST00000356000 ZFYP08048 801 aaPredicted RBP16.85■□□□□ 0.29
RTN3-205ENST00000356000 PTGDRQ13258 359 aa16.85■□□□□ 0.29
RTN3-205ENST00000356000 ITGA7Q13683 1181 aa16.85■□□□□ 0.29
RTN3-205ENST00000356000 ZNF174Q15697 407 aa16.85■□□□□ 0.29
RTN3-205ENST00000356000 UBAP2Q5T6F2 1119 aaKnown RBP16.85■□□□□ 0.29
RTN3-205ENST00000356000 IQCF2Q8IXL9 164 aa16.85■□□□□ 0.29
RTN3-205ENST00000356000 ZBED8Q8IZ13 594 aa16.85■□□□□ 0.29
RTN3-205ENST00000356000 ANKRD42Q8N9B4 389 aa16.85■□□□□ 0.29
RTN3-205ENST00000356000 FAM133AQ8N9E0 248 aa16.85■□□□□ 0.29
RTN3-205ENST00000356000 LRRC57Q8N9N7 239 aa16.85■□□□□ 0.29
RTN3-205ENST00000356000 CADM1Q9BY67 442 aaKnown RBP16.85■□□□□ 0.29
RTN3-205ENST00000356000 MLXIPLQ9NP71 852 aa16.85■□□□□ 0.29
RTN3-205ENST00000356000 B4E1Z4 1266 aa16.84■□□□□ 0.29
RTN3-205ENST00000356000 TAC1P20366 129 aa16.84■□□□□ 0.29
RTN3-205ENST00000356000 GTF2H1P32780 548 aa16.84■□□□□ 0.29
RTN3-205ENST00000356000 DRG2P55039 364 aaKnown RBP16.84■□□□□ 0.29
RTN3-205ENST00000356000 CDR2Q01850 454 aa16.84■□□□□ 0.29
RTN3-205ENST00000356000 DSG1Q02413 1049 aa16.84■□□□□ 0.29
RTN3-205ENST00000356000 PDCD4Q53EL6 469 aaKnown RBP16.84■□□□□ 0.29
RTN3-205ENST00000356000 SATL1Q86VE3 508 aa16.84■□□□□ 0.29
RTN3-205ENST00000356000 TREML1Q86YW5 311 aa16.84■□□□□ 0.29
RTN3-205ENST00000356000 CRACR2BQ8N4Y2 399 aaPredicted RBP16.84■□□□□ 0.29
RTN3-205ENST00000356000 DTX3LQ8TDB6 740 aa16.84■□□□□ 0.29
RTN3-205ENST00000356000 SYN2Q92777 582 aaPredicted RBP16.84■□□□□ 0.29
RTN3-205ENST00000356000 CEP126Q9P2H0 1117 aa16.84■□□□□ 0.29
RTN3-205ENST00000356000 HEY1Q9Y5J3 304 aa16.84■□□□□ 0.29
RTN3-205ENST00000356000 LY75O60449 1722 aa16.84■□□□□ 0.29
RTN3-205ENST00000356000 POTEFA5A3E0 1075 aa16.84■□□□□ 0.29
RTN3-205ENST00000356000 NEURL1BA8MQ27 555 aa16.84■□□□□ 0.29
RTN3-205ENST00000356000 RIPK2O43353 540 aa16.84■□□□□ 0.29
RTN3-205ENST00000356000 SERPINB7O75635 380 aa16.84■□□□□ 0.29
RTN3-205ENST00000356000 OR6B1O95007 311 aa16.84■□□□□ 0.29
RTN3-205ENST00000356000 GH1P01241 217 aa16.84■□□□□ 0.29
RTN3-205ENST00000356000 PDGFRBP09619 1106 aa16.84■□□□□ 0.29
RTN3-205ENST00000356000 POTEIP0CG38 1075 aa16.84■□□□□ 0.29
RTN3-205ENST00000356000 CPA3P15088 417 aa16.84■□□□□ 0.29
RTN3-205ENST00000356000 STX2P32856 288 aa16.84■□□□□ 0.29
RTN3-205ENST00000356000 GCKRQ14397 625 aa16.84■□□□□ 0.29
RTN3-205ENST00000356000 GRM2Q14416 872 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 145.1 ms