RNA–Protein interactions for RNA: ENST00000355480.9

COL18A1-202, Transcript of collagen type XVIII alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL18A1, Length 5,924 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-202ENST00000355480 PRDM5Q9NQX1 630 aaPredicted RBP19.18■□□□□ 0.66
COL18A1-202ENST00000355480 FRMD3A2A2Y4 597 aa19.18■□□□□ 0.66
COL18A1-202ENST00000355480 PRR29P0C7W0 189 aa19.18■□□□□ 0.66
COL18A1-202ENST00000355480 COPS2P61201 443 aa19.18■□□□□ 0.66
COL18A1-202ENST00000355480 RAET1EQ8TD07 263 aa19.18■□□□□ 0.66
COL18A1-202ENST00000355480 KCNH4Q9UQ05 1017 aa19.18■□□□□ 0.66
COL18A1-202ENST00000355480 MAP3K7O43318 606 aa19.18■□□□□ 0.66
COL18A1-202ENST00000355480 KRT7P08729 469 aa19.18■□□□□ 0.66
COL18A1-202ENST00000355480 MTMR2Q13614 643 aa19.18■□□□□ 0.66
COL18A1-202ENST00000355480 CAPRIN1Q14444 709 aaKnown RBP19.18■□□□□ 0.66
COL18A1-202ENST00000355480 PIP4K2CQ8TBX8 421 aa19.18■□□□□ 0.66
COL18A1-202ENST00000355480 PPARGC1AQ9UBK2 798 aaKnown RBP19.18■□□□□ 0.66
COL18A1-202ENST00000355480 USP11P51784 963 aa19.18■□□□□ 0.66
COL18A1-202ENST00000355480 POU5F1BQ06416 359 aa19.18■□□□□ 0.66
COL18A1-202ENST00000355480 BTBD8Q5XKL5 378 aa19.18■□□□□ 0.66
COL18A1-202ENST00000355480 ZNF560Q96MR9 790 aa19.18■□□□□ 0.66
COL18A1-202ENST00000355480 DHX35Q9H5Z1 703 aaKnown RBP19.18■□□□□ 0.66
COL18A1-202ENST00000355480 FTLP02792 175 aaPredicted RBP19.17■□□□□ 0.66
COL18A1-202ENST00000355480 TXNP10599 105 aaKnown RBP19.17■□□□□ 0.66
COL18A1-202ENST00000355480 HDLBPQ00341 1268 aaKnown RBP19.17■□□□□ 0.66
COL18A1-202ENST00000355480 ZNF211Q13398 564 aaPredicted RBP19.17■□□□□ 0.66
COL18A1-202ENST00000355480 SYT2Q8N9I0 419 aaPredicted RBP19.17■□□□□ 0.66
COL18A1-202ENST00000355480 GJD4Q96KN9 370 aaPredicted RBP19.17■□□□□ 0.66
COL18A1-202ENST00000355480 TRIM55Q9BYV6 548 aa19.17■□□□□ 0.66
COL18A1-202ENST00000355480 ANGPTL2Q9UKU9 493 aa19.17■□□□□ 0.66
COL18A1-202ENST00000355480 CHRNA5P30532 468 aa19.17■□□□□ 0.66
COL18A1-202ENST00000355480 KLHL38Q2WGJ6 581 aa19.17■□□□□ 0.66
COL18A1-202ENST00000355480 OR6J1Q8NGC5 347 aa19.17■□□□□ 0.66
COL18A1-202ENST00000355480 NEDD1Q8NHV4 660 aa19.17■□□□□ 0.66
COL18A1-202ENST00000355480 GOLPH3LQ9H4A5 285 aa19.17■□□□□ 0.66
COL18A1-202ENST00000355480 CLCN6P51797 869 aa19.17■□□□□ 0.66
COL18A1-202ENST00000355480 PPP4R4Q6NUP7 873 aa19.17■□□□□ 0.66
COL18A1-202ENST00000355480 BCAR1P56945 870 aa19.17■□□□□ 0.66
COL18A1-202ENST00000355480 RNF149Q8NC42 400 aa19.17■□□□□ 0.66
COL18A1-202ENST00000355480 APOBEC2Q9Y235 224 aaKnown RBP19.17■□□□□ 0.66
COL18A1-202ENST00000355480 TMCC1O94876 653 aa19.16■□□□□ 0.66
COL18A1-202ENST00000355480 DUOXA2Q1HG44 320 aa19.16■□□□□ 0.66
COL18A1-202ENST00000355480 ITPRIPL1Q6GPH6 555 aa19.16■□□□□ 0.66
COL18A1-202ENST00000355480 ACAD11Q709F0 780 aa19.16■□□□□ 0.66
COL18A1-202ENST00000355480 HIPK4Q8NE63 616 aa19.16■□□□□ 0.66
COL18A1-202ENST00000355480 FGFR1OP2Q9NVK5 253 aa19.16■□□□□ 0.66
COL18A1-202ENST00000355480 CCNYL1Q8N7R7 359 aa19.16■□□□□ 0.66
COL18A1-202ENST00000355480 EGFL8Q99944 293 aa19.16■□□□□ 0.66
COL18A1-202ENST00000355480 JPH1Q9HDC5 661 aaPredicted RBP19.16■□□□□ 0.66
COL18A1-202ENST00000355480 L3MBTL1Q9Y468 752 aa19.16■□□□□ 0.66
COL18A1-202ENST00000355480 HNRNPCL2B2RXH8 293 aa19.16■□□□□ 0.66
COL18A1-202ENST00000355480 H3BRJ5 948 aa19.16■□□□□ 0.66
COL18A1-202ENST00000355480 HNRNPCL1O60812 293 aaKnown RBP19.16■□□□□ 0.66
COL18A1-202ENST00000355480 TRIM49P0CI25 452 aa19.16■□□□□ 0.66
COL18A1-202ENST00000355480 TRIM49CP0CI26 452 aa19.16■□□□□ 0.66
COL18A1-202ENST00000355480 CAV1Q03135 178 aa19.16■□□□□ 0.66
COL18A1-202ENST00000355480 TRIM59Q8IWR1 403 aa19.16■□□□□ 0.66
COL18A1-202ENST00000355480 TRIM4Q9C037 500 aa19.16■□□□□ 0.66
COL18A1-202ENST00000355480 MYBL1P10243 752 aa19.16■□□□□ 0.66
COL18A1-202ENST00000355480 RALAP11233 206 aa19.16■□□□□ 0.66
COL18A1-202ENST00000355480 PRAMEP78395 509 aa19.16■□□□□ 0.66
COL18A1-202ENST00000355480 RAD51Q06609 339 aa19.16■□□□□ 0.66
COL18A1-202ENST00000355480 PTK2BQ14289 1009 aa19.16■□□□□ 0.66
COL18A1-202ENST00000355480 LBRQ14739 615 aaKnown RBP19.16■□□□□ 0.66
COL18A1-202ENST00000355480 KCNV1Q6PIU1 500 aa19.16■□□□□ 0.66
COL18A1-202ENST00000355480 HAUS6Q7Z4H7 955 aa19.16■□□□□ 0.66
COL18A1-202ENST00000355480 PIN4Q9Y237 131 aaKnown RBP19.16■□□□□ 0.66
COL18A1-202ENST00000355480 ROR1Q01973 937 aa19.16■□□□□ 0.66
COL18A1-202ENST00000355480 CACNB2Q08289 660 aaPredicted RBP19.16■□□□□ 0.66
COL18A1-202ENST00000355480 KCNA1Q09470 495 aa19.16■□□□□ 0.66
COL18A1-202ENST00000355480 EPHA7Q15375 998 aa19.16■□□□□ 0.66
COL18A1-202ENST00000355480 MICALL2Q8IY33 904 aa19.16■□□□□ 0.66
COL18A1-202ENST00000355480 PPM1NQ8N819 430 aa19.16■□□□□ 0.66
COL18A1-202ENST00000355480 ELAC2Q9BQ52 826 aaKnown RBP19.16■□□□□ 0.66
COL18A1-202ENST00000355480 MAP3K20Q9NYL2 800 aaKnown RBP19.16■□□□□ 0.66
COL18A1-202ENST00000355480 TSR3Q9UJK0 312 aaKnown RBP19.16■□□□□ 0.66
COL18A1-202ENST00000355480 ITM2BQ9Y287 266 aa19.16■□□□□ 0.66
COL18A1-202ENST00000355480 RRP15Q9Y3B9 282 aaKnown RBP19.16■□□□□ 0.66
COL18A1-202ENST00000355480 HECW2Q9P2P5 1572 aa19.16■□□□□ 0.66
COL18A1-202ENST00000355480 CTIFO43310 598 aaKnown RBP19.15■□□□□ 0.66
COL18A1-202ENST00000355480 PEX19P40855 299 aa19.15■□□□□ 0.66
COL18A1-202ENST00000355480 STAT5BP51692 787 aa19.15■□□□□ 0.66
COL18A1-202ENST00000355480 ARID5BQ14865 1188 aa19.15■□□□□ 0.66
COL18A1-202ENST00000355480 SH3KBP1Q96B97 665 aa19.15■□□□□ 0.66
COL18A1-202ENST00000355480 ORC4O43929 436 aa19.15■□□□□ 0.66
COL18A1-202ENST00000355480 LCP1P13796 627 aa19.15■□□□□ 0.66
COL18A1-202ENST00000355480 AP3M2P53677 418 aa19.15■□□□□ 0.66
COL18A1-202ENST00000355480 KYAT1Q16773 422 aa19.15■□□□□ 0.66
COL18A1-202ENST00000355480 TAS2R42Q7RTR8 314 aa19.15■□□□□ 0.66
COL18A1-202ENST00000355480 STAG2Q8N3U4 1231 aa19.15■□□□□ 0.66
COL18A1-202ENST00000355480 AFF4Q9UHB7 1163 aaKnown RBP19.15■□□□□ 0.66
COL18A1-202ENST00000355480 EMSYQ7Z589 1322 aa19.15■□□□□ 0.66
COL18A1-202ENST00000355480 MMEP08473 750 aa19.15■□□□□ 0.66
COL18A1-202ENST00000355480 SSTR3P32745 418 aaPredicted RBP19.15■□□□□ 0.66
COL18A1-202ENST00000355480 EFNA5P52803 228 aa19.15■□□□□ 0.66
COL18A1-202ENST00000355480 ENOSF1Q7L5Y1 443 aa19.15■□□□□ 0.66
COL18A1-202ENST00000355480 RASSF3Q86WH2 238 aa19.15■□□□□ 0.66
COL18A1-202ENST00000355480 YWHABP31946 246 aaKnown RBP19.15■□□□□ 0.66
COL18A1-202ENST00000355480 FBXW4P57775 412 aa19.15■□□□□ 0.66
COL18A1-202ENST00000355480 GRAMD1BQ3KR37 738 aa19.15■□□□□ 0.66
COL18A1-202ENST00000355480 FSCBQ5H9T9 825 aa19.15■□□□□ 0.66
COL18A1-202ENST00000355480 CDKL3Q8IVW4 592 aaPredicted RBP19.15■□□□□ 0.66
COL18A1-202ENST00000355480 ZNF212Q9UDV6 495 aa19.15■□□□□ 0.66
COL18A1-202ENST00000355480 DCTN3O75935 186 aa19.15■□□□□ 0.66
COL18A1-202ENST00000355480 DDX56Q9NY93 547 aaKnown RBP19.15■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms