RNA–Protein interactions for RNA: ENST00000354513.9

PDGFA-201, Transcript of platelet derived growth factor subunit A, humanhuman

TSL 1 (best) BASIC

Gene PDGFA, Length 1,308 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFA-201ENST00000354513 FBXL6Q8N531 539 aa17.74■□□□□ 0.43
PDGFA-201ENST00000354513 RSPH1Q8WYR4 309 aa17.74■□□□□ 0.43
PDGFA-201ENST00000354513 JPH2Q9BR39 696 aaPredicted RBP17.74■□□□□ 0.43
PDGFA-201ENST00000354513 SLKQ9H2G2 1235 aaPredicted RBP17.74■□□□□ 0.43
PDGFA-201ENST00000354513 SMOC2Q9H3U7 446 aa17.74■□□□□ 0.43
PDGFA-201ENST00000354513 CDKL5O76039 1030 aa17.73■□□□□ 0.43
PDGFA-201ENST00000354513 SKIP12755 728 aa17.73■□□□□ 0.43
PDGFA-201ENST00000354513 YWHABP31946 246 aaKnown RBP17.73■□□□□ 0.43
PDGFA-201ENST00000354513 RFC5P40937 340 aa17.73■□□□□ 0.43
PDGFA-201ENST00000354513 CYP4A11Q02928 519 aa17.73■□□□□ 0.43
PDGFA-201ENST00000354513 CTTNQ14247 550 aaKnown RBP17.73■□□□□ 0.43
PDGFA-201ENST00000354513 TPRNQ4KMQ1 711 aa17.73■□□□□ 0.43
PDGFA-201ENST00000354513 RARS2Q5T160 578 aaKnown RBP17.73■□□□□ 0.43
PDGFA-201ENST00000354513 NCAPH2Q6IBW4 605 aa17.73■□□□□ 0.43
PDGFA-201ENST00000354513 SRGAP1Q7Z6B7 1085 aa17.73■□□□□ 0.43
PDGFA-201ENST00000354513 FERMT3Q86UX7 667 aa17.73■□□□□ 0.43
PDGFA-201ENST00000354513 SMG8Q8ND04 991 aaKnown RBP17.73■□□□□ 0.43
PDGFA-201ENST00000354513 PSPC1Q8WXF1 523 aaKnown RBP17.73■□□□□ 0.43
PDGFA-201ENST00000354513 SLC7A3Q8WY07 619 aa17.73■□□□□ 0.43
PDGFA-201ENST00000354513 GBP3Q9H0R5 595 aa17.73■□□□□ 0.43
PDGFA-201ENST00000354513 MARCH5Q9NX47 278 aa17.73■□□□□ 0.43
PDGFA-201ENST00000354513 PPME1Q9Y570 386 aa17.73■□□□□ 0.43
PDGFA-201ENST00000354513 LILRB3O75022 631 aa17.72■□□□□ 0.43
PDGFA-201ENST00000354513 SRGAP2CP0DJJ0 459 aa17.72■□□□□ 0.43
PDGFA-201ENST00000354513 ITIH3Q06033 890 aa17.72■□□□□ 0.43
PDGFA-201ENST00000354513 ST3GAL1Q11201 340 aa17.72■□□□□ 0.43
PDGFA-201ENST00000354513 ME3Q16798 604 aa17.72■□□□□ 0.43
PDGFA-201ENST00000354513 KIAA1841Q6NSI8 718 aa17.72■□□□□ 0.43
PDGFA-201ENST00000354513 NECAB1Q8N987 351 aa17.72■□□□□ 0.43
PDGFA-201ENST00000354513 RSAD1Q9HA92 442 aa17.72■□□□□ 0.43
PDGFA-201ENST00000354513 ORC3Q9UBD5 711 aaPredicted RBP17.72■□□□□ 0.43
PDGFA-201ENST00000354513 ZDBF2Q9HCK1 2354 aa17.72■□□□□ 0.43
PDGFA-201ENST00000354513 DOCK8Q8NF50 2099 aa17.72■□□□□ 0.43
PDGFA-201ENST00000354513 MYO15AQ9UKN7 3530 aa17.72■□□□□ 0.43
PDGFA-201ENST00000354513 VWA8A3KMH1 1905 aa17.72■□□□□ 0.43
PDGFA-201ENST00000354513 TSPAN1O60635 241 aa17.72■□□□□ 0.43
PDGFA-201ENST00000354513 DKC1O60832 514 aaKnown RBP eCLIP17.72■□□□□ 0.43
PDGFA-201ENST00000354513 SLITRK3O94933 977 aa17.72■□□□□ 0.43
PDGFA-201ENST00000354513 EFEMP2O95967 443 aa17.72■□□□□ 0.43
PDGFA-201ENST00000354513 CA8P35219 290 aa17.72■□□□□ 0.43
PDGFA-201ENST00000354513 AMHR2Q16671 573 aa17.72■□□□□ 0.43
PDGFA-201ENST00000354513 RNF149Q8NC42 400 aa17.72■□□□□ 0.43
PDGFA-201ENST00000354513 NECTIN4Q96NY8 510 aa17.72■□□□□ 0.43
PDGFA-201ENST00000354513 EIF2AQ9BY44 585 aaKnown RBP17.72■□□□□ 0.43
PDGFA-201ENST00000354513 DZANK1Q9NVP4 752 aa17.72■□□□□ 0.43
PDGFA-201ENST00000354513 TRIP11Q15643 1979 aa17.71■□□□□ 0.43
PDGFA-201ENST00000354513 INPPL1O15357 1258 aa17.71■□□□□ 0.42
PDGFA-201ENST00000354513 BRD1O95696 1058 aa17.71■□□□□ 0.42
PDGFA-201ENST00000354513 NCLP19338 710 aaKnown RBP17.71■□□□□ 0.42
PDGFA-201ENST00000354513 KRT2P35908 639 aa17.71■□□□□ 0.42
PDGFA-201ENST00000354513 RNASELQ05823 741 aaKnown RBP17.71■□□□□ 0.42
PDGFA-201ENST00000354513 XKR9Q5GH70 373 aa17.71■□□□□ 0.42
PDGFA-201ENST00000354513 IFNLR1Q8IU57 520 aaPredicted RBP17.71■□□□□ 0.42
PDGFA-201ENST00000354513 RNF168Q8IYW5 571 aaPredicted RBP17.71■□□□□ 0.42
PDGFA-201ENST00000354513 KREMEN2Q8NCW0 462 aa17.71■□□□□ 0.42
PDGFA-201ENST00000354513 NSUN7Q8NE18 718 aaKnown RBP17.71■□□□□ 0.42
PDGFA-201ENST00000354513 ASAP3Q8TDY4 903 aa17.71■□□□□ 0.42
PDGFA-201ENST00000354513 GTF3C6Q969F1 213 aa17.71■□□□□ 0.42
PDGFA-201ENST00000354513 PGBD4Q96DM1 585 aa17.71■□□□□ 0.42
PDGFA-201ENST00000354513 RNF39Q9H2S5 420 aa17.71■□□□□ 0.42
PDGFA-201ENST00000354513 ZSWIM4Q9H7M6 989 aa17.71■□□□□ 0.42
PDGFA-201ENST00000354513 TSHZ2Q9NRE2 1034 aa17.71■□□□□ 0.42
PDGFA-201ENST00000354513 MIOSQ9NXC5 875 aa17.71■□□□□ 0.42
PDGFA-201ENST00000354513 NR2E1Q9Y466 385 aa17.71■□□□□ 0.42
PDGFA-201ENST00000354513 CNTNAP2Q9UHC6 1331 aa17.7■□□□□ 0.42
PDGFA-201ENST00000354513 F8W810 466 aa17.7■□□□□ 0.42
PDGFA-201ENST00000354513 NRP1O14786 923 aa17.7■□□□□ 0.42
PDGFA-201ENST00000354513 GAS2O43903 313 aaKnown RBP17.7■□□□□ 0.42
PDGFA-201ENST00000354513 LYPLA2O95372 231 aa17.7■□□□□ 0.42
PDGFA-201ENST00000354513 POMCP01189 267 aa17.7■□□□□ 0.42
PDGFA-201ENST00000354513 MTHFRP42898 656 aa17.7■□□□□ 0.42
PDGFA-201ENST00000354513 CLCN4P51793 760 aa17.7■□□□□ 0.42
PDGFA-201ENST00000354513 ANAPC15P60006 121 aa17.7■□□□□ 0.42
PDGFA-201ENST00000354513 PTENP60484 403 aa17.7■□□□□ 0.42
PDGFA-201ENST00000354513 CAPSQ13938 189 aa17.7■□□□□ 0.42
PDGFA-201ENST00000354513 CES5AQ6NT32 575 aa17.7■□□□□ 0.42
PDGFA-201ENST00000354513 SUGP1Q8IWZ8 645 aaKnown RBP17.7■□□□□ 0.42
PDGFA-201ENST00000354513 URGCPQ8TCY9 931 aa17.7■□□□□ 0.42
PDGFA-201ENST00000354513 CPB2Q96IY4 423 aa17.7■□□□□ 0.42
PDGFA-201ENST00000354513 KLHL5Q96PQ7 755 aa17.7■□□□□ 0.42
PDGFA-201ENST00000354513 MTRQ99707 1265 aa17.7■□□□□ 0.42
PDGFA-201ENST00000354513 NAP1L4Q99733 375 aaKnown RBP17.7■□□□□ 0.42
PDGFA-201ENST00000354513 HSD17B14Q9BPX1 270 aa17.7■□□□□ 0.42
PDGFA-201ENST00000354513 EIF2AK1Q9BQI3 630 aaKnown RBP17.7■□□□□ 0.42
PDGFA-201ENST00000354513 TMEM175Q9BSA9 504 aa17.7■□□□□ 0.42
PDGFA-201ENST00000354513 IPPQ9Y573 584 aa17.7■□□□□ 0.42
PDGFA-201ENST00000354513 DMDP11532 3685 aa17.69■□□□□ 0.42
PDGFA-201ENST00000354513 JAK2O60674 1132 aa17.69■□□□□ 0.42
PDGFA-201ENST00000354513 SSBP05455 408 aaKnown RBP eCLIP17.69■□□□□ 0.42
PDGFA-201ENST00000354513 ASGR2P07307 311 aa17.69■□□□□ 0.42
PDGFA-201ENST00000354513 CNPP09543 421 aaKnown RBP17.69■□□□□ 0.42
PDGFA-201ENST00000354513 XBP1P17861 261 aa17.69■□□□□ 0.42
PDGFA-201ENST00000354513 MBTD1Q05BQ5 628 aa17.69■□□□□ 0.42
PDGFA-201ENST00000354513 DSC1Q08554 894 aa17.69■□□□□ 0.42
PDGFA-201ENST00000354513 GIT2Q14161 759 aa17.69■□□□□ 0.42
PDGFA-201ENST00000354513 TAS1R1Q7RTX1 841 aa17.69■□□□□ 0.42
PDGFA-201ENST00000354513 COLGALT2Q8IYK4 626 aa17.69■□□□□ 0.42
PDGFA-201ENST00000354513 SLFN12Q8IYM2 578 aa17.69■□□□□ 0.42
PDGFA-201ENST00000354513 TCP11Q8WWU5 503 aa17.69■□□□□ 0.42
PDGFA-201ENST00000354513 RIPOR3Q96MK2 946 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms