RNA–Protein interactions for RNA: ENST00000352993.7

BRCA1-201, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 3,668 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-201ENST00000352993 ATF3P18847 181 aa8.19□□□□□ -1.1
BRCA1-201ENST00000352993 PON1P27169 355 aa8.19□□□□□ -1.1
BRCA1-201ENST00000352993 CHRNA3P32297 505 aa8.19□□□□□ -1.1
BRCA1-201ENST00000352993 VHLP40337 213 aa8.19□□□□□ -1.1
BRCA1-201ENST00000352993 ZBTB16Q05516 673 aa8.19□□□□□ -1.1
BRCA1-201ENST00000352993 CHRNDQ07001 517 aa8.19□□□□□ -1.1
BRCA1-201ENST00000352993 MGAT5Q09328 741 aa8.19□□□□□ -1.1
BRCA1-201ENST00000352993 CTTNQ14247 550 aaKnown RBP8.19□□□□□ -1.1
BRCA1-201ENST00000352993 CAPN12Q6ZSI9 719 aa8.19□□□□□ -1.1
BRCA1-201ENST00000352993 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP8.19□□□□□ -1.1
BRCA1-201ENST00000352993 KLHL23Q8NBE8 558 aa8.19□□□□□ -1.1
BRCA1-201ENST00000352993 SCG3Q8WXD2 468 aaKnown RBP8.19□□□□□ -1.1
BRCA1-201ENST00000352993 RFFLQ8WZ73 363 aa8.19□□□□□ -1.1
BRCA1-201ENST00000352993 SEC14L1Q92503 715 aa8.19□□□□□ -1.1
BRCA1-201ENST00000352993 POP1Q99575 1024 aaKnown RBP8.19□□□□□ -1.1
BRCA1-201ENST00000352993 DENND2DQ9H6A0 471 aaPredicted RBP8.19□□□□□ -1.1
BRCA1-201ENST00000352993 PKD1L3Q7Z443 1732 aa8.19□□□□□ -1.1
BRCA1-201ENST00000352993 BTNL10A8MVZ5 291 aa8.18□□□□□ -1.1
BRCA1-201ENST00000352993 RASA4BC9J798 803 aa8.18□□□□□ -1.1
BRCA1-201ENST00000352993 RASA4O43374 803 aa8.18□□□□□ -1.1
BRCA1-201ENST00000352993 CYTH3O43739 400 aa8.18□□□□□ -1.1
BRCA1-201ENST00000352993 LRRN2O75325 713 aa8.18□□□□□ -1.1
BRCA1-201ENST00000352993 OAS1P00973 400 aaKnown RBP8.18□□□□□ -1.1
BRCA1-201ENST00000352993 ACADSP16219 412 aa8.18□□□□□ -1.1
BRCA1-201ENST00000352993 GM2AP17900 193 aa8.18□□□□□ -1.1
BRCA1-201ENST00000352993 GSTT1P30711 240 aa8.18□□□□□ -1.1
BRCA1-201ENST00000352993 SCNN1BP51168 640 aa8.18□□□□□ -1.1
BRCA1-201ENST00000352993 POU5F1Q01860 360 aaKnown RBP8.18□□□□□ -1.1
BRCA1-201ENST00000352993 DCAF12L1Q5VU92 463 aa8.18□□□□□ -1.1
BRCA1-201ENST00000352993 CYP4F22Q6NT55 531 aa8.18□□□□□ -1.1
BRCA1-201ENST00000352993 IRGCQ6NXR0 463 aa8.18□□□□□ -1.1
BRCA1-201ENST00000352993 EPM2AIP1Q7L775 607 aaPredicted RBP8.18□□□□□ -1.1
BRCA1-201ENST00000352993 HS2ST1Q7LGA3 356 aa8.18□□□□□ -1.1
BRCA1-201ENST00000352993 ASAP3Q8TDY4 903 aa8.18□□□□□ -1.1
BRCA1-201ENST00000352993 ALG3Q92685 438 aa8.18□□□□□ -1.1
BRCA1-201ENST00000352993 CCDC77Q9BR77 488 aa8.18□□□□□ -1.1
BRCA1-201ENST00000352993 CARD9Q9H257 536 aa8.18□□□□□ -1.1
BRCA1-201ENST00000352993 VCX3BQ9H321 246 aa8.18□□□□□ -1.1
BRCA1-201ENST00000352993 DCLRE1BQ9H816 532 aa8.18□□□□□ -1.1
BRCA1-201ENST00000352993 VCX3AQ9NNX9 186 aa8.18□□□□□ -1.1
BRCA1-201ENST00000352993 DCP1AQ9NPI6 582 aaPredicted RBP8.18□□□□□ -1.1
BRCA1-201ENST00000352993 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.18□□□□□ -1.14e-6■■■■■ 85.3
BRCA1-201ENST00000352993 PCMTD2Q9NV79 361 aa8.18□□□□□ -1.1
BRCA1-201ENST00000352993 GRHL1Q9NZI5 618 aa8.18□□□□□ -1.1
BRCA1-201ENST00000352993 STXBP5LQ9Y2K9 1186 aa8.18□□□□□ -1.1
BRCA1-201ENST00000352993 BAZ2AQ9UIF9 1905 aaKnown RBP8.18□□□□□ -1.1
BRCA1-201ENST00000352993 WDR91A4D1P6 747 aa8.18□□□□□ -1.1
BRCA1-201ENST00000352993 ANKRD63C9JTQ0 380 aa8.18□□□□□ -1.1
BRCA1-201ENST00000352993 CAPN9O14815 690 aa8.18□□□□□ -1.1
BRCA1-201ENST00000352993 SLC37A4O43826 429 aa8.18□□□□□ -1.1
BRCA1-201ENST00000352993 PFDN1O60925 122 aa8.18□□□□□ -1.1
BRCA1-201ENST00000352993 KRT15P19012 456 aa8.18□□□□□ -1.1
BRCA1-201ENST00000352993 CCNG1P51959 295 aa8.18□□□□□ -1.1
BRCA1-201ENST00000352993 POLGP54098 1239 aaPredicted RBP8.18□□□□□ -1.1
BRCA1-201ENST00000352993 CDR2Q01850 454 aa8.18□□□□□ -1.1
BRCA1-201ENST00000352993 MKRN3Q13064 507 aaKnown RBP8.18□□□□□ -1.1
BRCA1-201ENST00000352993 RBM26Q5T8P6 1007 aaKnown RBP8.18□□□□□ -1.1
BRCA1-201ENST00000352993 USP17L2Q6R6M4 530 aa8.18□□□□□ -1.1
BRCA1-201ENST00000352993 VSTM1Q6UX27 236 aa8.18□□□□□ -1.1
BRCA1-201ENST00000352993 THAP2Q9H0W7 228 aa8.18□□□□□ -1.1
BRCA1-201ENST00000352993 SLCO1B3Q9NPD5 702 aa8.18□□□□□ -1.1
BRCA1-201ENST00000352993 SDAD1Q9NVU7 687 aaKnown RBP eCLIP8.18□□□□□ -1.1
BRCA1-201ENST00000352993 LMCD1Q9NZU5 365 aa8.18□□□□□ -1.1
BRCA1-201ENST00000352993 DCTN4Q9UJW0 460 aa8.18□□□□□ -1.1
BRCA1-201ENST00000352993 PHTF1Q9UMS5 762 aa8.18□□□□□ -1.1
BRCA1-201ENST00000352993 ALG6Q9Y672 507 aa8.18□□□□□ -1.1
BRCA1-201ENST00000352993 SIPA1L3O60292 1781 aaPredicted RBP8.18□□□□□ -1.1
BRCA1-201ENST00000352993 WTIPA6NIX2 430 aaPredicted RBP8.18□□□□□ -1.1
BRCA1-201ENST00000352993 E7ENQ6 273 aa8.18□□□□□ -1.1
BRCA1-201ENST00000352993 MAP3K7O43318 606 aa8.18□□□□□ -1.1
BRCA1-201ENST00000352993 DCTN3O75935 186 aa8.18□□□□□ -1.1
BRCA1-201ENST00000352993 ECEL1O95672 775 aa8.18□□□□□ -1.1
BRCA1-201ENST00000352993 PCP11498 1178 aaKnown RBP8.18□□□□□ -1.1
BRCA1-201ENST00000352993 CCNB1P14635 433 aa8.18□□□□□ -1.1
BRCA1-201ENST00000352993 ETS2P15036 469 aa8.18□□□□□ -1.1
BRCA1-201ENST00000352993 LMNB1P20700 586 aa8.18□□□□□ -1.1
BRCA1-201ENST00000352993 MARK3P27448 753 aa8.18□□□□□ -1.1
BRCA1-201ENST00000352993 MARCKSL1P49006 195 aa8.18□□□□□ -1.1
BRCA1-201ENST00000352993 MPP2Q14168 576 aa8.18□□□□□ -1.1
BRCA1-201ENST00000352993 MTFR1Q15390 333 aa8.18□□□□□ -1.1
BRCA1-201ENST00000352993 COBLL1Q53SF7 1204 aa8.18□□□□□ -1.1
BRCA1-201ENST00000352993 RNF43Q68DV7 783 aa8.18□□□□□ -1.1
BRCA1-201ENST00000352993 PPP1R21Q6ZMI0 780 aa8.18□□□□□ -1.1
BRCA1-201ENST00000352993 ZNF513Q8N8E2 541 aaPredicted RBP8.18□□□□□ -1.1
BRCA1-201ENST00000352993 C1orf54Q8WWF1 131 aa8.18□□□□□ -1.1
BRCA1-201ENST00000352993 SPOCK2Q92563 424 aa8.18□□□□□ -1.1
BRCA1-201ENST00000352993 ARHGEF26Q96DR7 871 aa8.18□□□□□ -1.1
BRCA1-201ENST00000352993 MAGEB18Q96M61 343 aa8.18□□□□□ -1.1
BRCA1-201ENST00000352993 PIGSQ96S52 555 aa8.18□□□□□ -1.1
BRCA1-201ENST00000352993 ROPN1BQ9BZX4 212 aaPredicted RBP8.18□□□□□ -1.1
BRCA1-201ENST00000352993 UBE2OQ9C0C9 1292 aaKnown RBP8.18□□□□□ -1.1
BRCA1-201ENST00000352993 ROPN1Q9HAT0 212 aaPredicted RBP8.18□□□□□ -1.1
BRCA1-201ENST00000352993 ZFP69BQ9UJL9 534 aa8.18□□□□□ -1.1
BRCA1-201ENST00000352993 LRCH1Q9Y2L9 728 aa8.18□□□□□ -1.1
BRCA1-201ENST00000352993 FAM196BA6NMK8 535 aa8.17□□□□□ -1.1
BRCA1-201ENST00000352993 POC1B-GALNT4F8VUJ3 575 aa8.17□□□□□ -1.1
BRCA1-201ENST00000352993 DDX3YO15523 660 aaKnown RBP8.17□□□□□ -1.1
BRCA1-201ENST00000352993 RAD21O60216 631 aa8.17□□□□□ -1.1
BRCA1-201ENST00000352993 BAG2O95816 211 aa8.17□□□□□ -1.1
BRCA1-201ENST00000352993 PARP6Q2NL67 630 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms