RNA–Protein interactions for RNA: ENST00000349379.5

SNX3-202, Transcript of sorting nexin 3, humanhuman

TSL 2 BASIC

Gene SNX3, Length 890 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-202ENST00000349379 PCDHB2Q9Y5E7 798 aa24.42■■□□□ 1.5
SNX3-202ENST00000349379 CNTNAP2Q9UHC6 1331 aa24.41■■□□□ 1.5
SNX3-202ENST00000349379 EYSQ5T1H1 3165 aa24.41■■□□□ 1.5
SNX3-202ENST00000349379 B4GALT5O43286 388 aa24.41■■□□□ 1.5
SNX3-202ENST00000349379 SSBP05455 408 aaKnown RBP eCLIP24.41■■□□□ 1.5
SNX3-202ENST00000349379 DEPTORQ8TB45 409 aa24.41■■□□□ 1.5
SNX3-202ENST00000349379 RSPH1Q8WYR4 309 aa24.41■■□□□ 1.5
SNX3-202ENST00000349379 CPB2Q96IY4 423 aa24.41■■□□□ 1.5
SNX3-202ENST00000349379 KIFC3Q9BVG8 833 aa24.41■■□□□ 1.5
SNX3-202ENST00000349379 A0A1B0GUA9 196 aa24.4■■□□□ 1.5
SNX3-202ENST00000349379 MEIS3P2A8K0S8 358 aa24.4■■□□□ 1.5
SNX3-202ENST00000349379 EDN1P05305 212 aa24.4■■□□□ 1.5
SNX3-202ENST00000349379 IGFBP4P22692 258 aa24.4■■□□□ 1.5
SNX3-202ENST00000349379 CTNNB1P35222 781 aa24.4■■□□□ 1.5
SNX3-202ENST00000349379 NPTX2P47972 431 aa24.4■■□□□ 1.5
SNX3-202ENST00000349379 NCBP1Q09161 790 aaKnown RBP24.4■■□□□ 1.5
SNX3-202ENST00000349379 NAALADL2Q58DX5 795 aa24.4■■□□□ 1.5
SNX3-202ENST00000349379 LRRC55Q6ZSA7 311 aa24.4■■□□□ 1.5
SNX3-202ENST00000349379 RNF169Q8NCN4 708 aa24.4■■□□□ 1.5
SNX3-202ENST00000349379 LARP4BQ92615 738 aaKnown RBP24.4■■□□□ 1.5
SNX3-202ENST00000349379 P2RX5Q93086 422 aa24.4■■□□□ 1.5
SNX3-202ENST00000349379 NTPCRQ9BSD7 190 aaKnown RBP24.4■■□□□ 1.5
SNX3-202ENST00000349379 EIF2AQ9BY44 585 aaKnown RBP24.4■■□□□ 1.5
SNX3-202ENST00000349379 CWH43Q9H720 699 aa24.4■■□□□ 1.5
SNX3-202ENST00000349379 HCSTQ9UBK5 93 aa24.4■■□□□ 1.5
SNX3-202ENST00000349379 TRIP11Q15643 1979 aa24.4■■□□□ 1.5
SNX3-202ENST00000349379 MYO7AQ13402 2215 aa24.39■■□□□ 1.5
SNX3-202ENST00000349379 ACKR2O00590 384 aa24.39■■□□□ 1.49
SNX3-202ENST00000349379 NCLP19338 710 aaKnown RBP24.39■■□□□ 1.49
SNX3-202ENST00000349379 EFNA5P52803 228 aa24.39■■□□□ 1.49
SNX3-202ENST00000349379 PEX3P56589 373 aa24.39■■□□□ 1.49
SNX3-202ENST00000349379 DMP1Q13316 513 aaPredicted RBP24.39■■□□□ 1.49
SNX3-202ENST00000349379 GPM6BQ13491 265 aa24.39■■□□□ 1.49
SNX3-202ENST00000349379 MCM6Q14566 821 aa24.39■■□□□ 1.49
SNX3-202ENST00000349379 MAPK6Q16659 721 aa24.39■■□□□ 1.49
SNX3-202ENST00000349379 AGMOQ6ZNB7 445 aa24.39■■□□□ 1.49
SNX3-202ENST00000349379 LRRC43Q8N309 656 aa24.39■■□□□ 1.49
SNX3-202ENST00000349379 SMG8Q8ND04 991 aaKnown RBP24.39■■□□□ 1.49
SNX3-202ENST00000349379 CNNM3Q8NE01 707 aa24.39■■□□□ 1.49
SNX3-202ENST00000349379 RASSF8Q8NHQ8 419 aa24.39■■□□□ 1.49
SNX3-202ENST00000349379 HELQQ8TDG4 1101 aa24.39■■□□□ 1.49
SNX3-202ENST00000349379 LPPQ93052 612 aa24.39■■□□□ 1.49
SNX3-202ENST00000349379 TYW1Q9NV66 732 aaKnown RBP24.39■■□□□ 1.49
SNX3-202ENST00000349379 ARHGAP28Q9P2N2 729 aa24.39■■□□□ 1.49
SNX3-202ENST00000349379 STK17AQ9UEE5 414 aa24.39■■□□□ 1.49
SNX3-202ENST00000349379 CCDC39Q9UFE4 941 aa24.39■■□□□ 1.49
SNX3-202ENST00000349379 TTLL13PA6NNM8 815 aa24.38■■□□□ 1.49
SNX3-202ENST00000349379 GTPBP6O43824 516 aaPredicted RBP24.38■■□□□ 1.49
SNX3-202ENST00000349379 PRKCBP05771 671 aa24.38■■□□□ 1.49
SNX3-202ENST00000349379 DDIT3P35638 169 aa24.38■■□□□ 1.49
SNX3-202ENST00000349379 TXLNAP40222 546 aa24.38■■□□□ 1.49
SNX3-202ENST00000349379 DNM1Q05193 864 aaKnown RBP24.38■■□□□ 1.49
SNX3-202ENST00000349379 FOXD4L6Q3SYB3 417 aaPredicted RBP24.38■■□□□ 1.49
SNX3-202ENST00000349379 FOXD4L3Q6VB84 417 aaPredicted RBP24.38■■□□□ 1.49
SNX3-202ENST00000349379 GPBP1Q86WP2 473 aa24.38■■□□□ 1.49
SNX3-202ENST00000349379 ABI1Q8IZP0 508 aa24.38■■□□□ 1.49
SNX3-202ENST00000349379 SPIRE2Q8WWL2 714 aa24.38■■□□□ 1.49
SNX3-202ENST00000349379 PGBD4Q96DM1 585 aa24.38■■□□□ 1.49
SNX3-202ENST00000349379 C11orf84Q9BUA3 381 aaPredicted RBP24.38■■□□□ 1.49
SNX3-202ENST00000349379 TMEM134Q9H6X4 195 aa24.38■■□□□ 1.49
SNX3-202ENST00000349379 ODF2LQ9ULJ1 636 aa24.38■■□□□ 1.49
SNX3-202ENST00000349379 IPPQ9Y573 584 aa24.38■■□□□ 1.49
SNX3-202ENST00000349379 PHLPP2Q6ZVD8 1323 aa24.37■■□□□ 1.49
SNX3-202ENST00000349379 NPHP3-ACAD11A0A0J9YXS1 232 aa24.37■■□□□ 1.49
SNX3-202ENST00000349379 SFI1A8K8P3 1242 aa24.37■■□□□ 1.49
SNX3-202ENST00000349379 OFD1O75665 1012 aa24.37■■□□□ 1.49
SNX3-202ENST00000349379 PLS3P13797 630 aa24.37■■□□□ 1.49
SNX3-202ENST00000349379 RAD51AP2Q09MP3 1159 aa24.37■■□□□ 1.49
SNX3-202ENST00000349379 AXDND1Q5T1B0 1012 aaPredicted RBP24.37■■□□□ 1.49
SNX3-202ENST00000349379 KCNG4Q8TDN1 519 aa24.37■■□□□ 1.49
SNX3-202ENST00000349379 KCNN1Q92952 543 aa24.37■■□□□ 1.49
SNX3-202ENST00000349379 REEP2Q9BRK0 252 aa24.37■■□□□ 1.49
SNX3-202ENST00000349379 CFAP45Q9UL16 551 aa24.37■■□□□ 1.49
SNX3-202ENST00000349379 A0A087X0B3 334 aa24.36■■□□□ 1.49
SNX3-202ENST00000349379 CUTAO60888 179 aa24.36■■□□□ 1.49
SNX3-202ENST00000349379 ZNF131P52739 623 aa24.36■■□□□ 1.49
SNX3-202ENST00000349379 PRPF4BQ13523 1007 aaKnown RBP24.36■■□□□ 1.49
SNX3-202ENST00000349379 RRAGBQ5VZM2 374 aa24.36■■□□□ 1.49
SNX3-202ENST00000349379 SLC27A1Q6PCB7 646 aa24.36■■□□□ 1.49
SNX3-202ENST00000349379 TAS1R3Q7RTX0 852 aa24.36■■□□□ 1.49
SNX3-202ENST00000349379 CDR2LQ86X02 465 aaPredicted RBP24.36■■□□□ 1.49
SNX3-202ENST00000349379 MRPL9Q9BYD2 267 aaKnown RBP24.36■■□□□ 1.49
SNX3-202ENST00000349379 LMAN2LQ9H0V9 348 aa24.36■■□□□ 1.49
SNX3-202ENST00000349379 PDZD7Q9H5P4 517 aa24.36■■□□□ 1.49
SNX3-202ENST00000349379 KMT5AQ9NQR1 393 aa24.36■■□□□ 1.49
SNX3-202ENST00000349379 DAXXQ9UER7 740 aaPredicted RBP24.36■■□□□ 1.49
SNX3-202ENST00000349379 KCNG1Q9UIX4 513 aa24.36■■□□□ 1.49
SNX3-202ENST00000349379 RCOR1Q9UKL0 485 aa24.36■■□□□ 1.49
SNX3-202ENST00000349379 RBM19Q9Y4C8 960 aaKnown RBP24.36■■□□□ 1.49
SNX3-202ENST00000349379 CITO14578 2027 aa24.35■■□□□ 1.49
SNX3-202ENST00000349379 CCDC169A6NNP5 214 aa24.35■■□□□ 1.49
SNX3-202ENST00000349379 INPPL1O15357 1258 aa24.35■■□□□ 1.49
SNX3-202ENST00000349379 LAG3P18627 525 aa24.35■■□□□ 1.49
SNX3-202ENST00000349379 GIT2Q14161 759 aa24.35■■□□□ 1.49
SNX3-202ENST00000349379 LONRF3Q496Y0 759 aa24.35■■□□□ 1.49
SNX3-202ENST00000349379 SHC4Q6S5L8 630 aa24.35■■□□□ 1.49
SNX3-202ENST00000349379 GLB1LQ6UWU2 654 aa24.35■■□□□ 1.49
SNX3-202ENST00000349379 CCDC73Q6ZRK6 1079 aa24.35■■□□□ 1.49
SNX3-202ENST00000349379 COLGALT1Q8NBJ5 622 aa24.35■■□□□ 1.49
SNX3-202ENST00000349379 MRPL38Q96DV4 380 aaKnown RBP24.35■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 91 ms