RNA–Protein interactions for RNA: ENST00000345356.10

COL12A1-202, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL12A1, Length 5,886 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-202ENST00000345356 BHMT2Q9H2M3 363 aa12.85□□□□□ -0.35
COL12A1-202ENST00000345356 ZNF277Q9NRM2 450 aaPredicted RBP12.85□□□□□ -0.35
COL12A1-202ENST00000345356 PFASO15067 1338 aa12.85□□□□□ -0.35
COL12A1-202ENST00000345356 ADGBQ8N7X0 1667 aa12.85□□□□□ -0.35
COL12A1-202ENST00000345356 PRPSAP2O60256 369 aa12.85□□□□□ -0.35
COL12A1-202ENST00000345356 ITIH2P19823 946 aa12.85□□□□□ -0.35
COL12A1-202ENST00000345356 SEMA3FQ13275 785 aa12.85□□□□□ -0.35
COL12A1-202ENST00000345356 SFR1Q86XK3 245 aa12.85□□□□□ -0.35
COL12A1-202ENST00000345356 ATP6V1E2Q96A05 226 aa12.85□□□□□ -0.35
COL12A1-202ENST00000345356 DACH2Q96NX9 599 aa12.85□□□□□ -0.35
COL12A1-202ENST00000345356 KIAA0556O60303 1618 aa12.84□□□□□ -0.35
COL12A1-202ENST00000345356 DYTNA2CJ06 578 aa12.84□□□□□ -0.35
COL12A1-202ENST00000345356 LRRIQ4A6NIV6 560 aa12.84□□□□□ -0.35
COL12A1-202ENST00000345356 PSMA2P25787 234 aa12.84□□□□□ -0.35
COL12A1-202ENST00000345356 PFKFB3Q16875 520 aaPredicted RBP12.84□□□□□ -0.35
COL12A1-202ENST00000345356 TTC13Q8NBP0 860 aa12.84□□□□□ -0.35
COL12A1-202ENST00000345356 APOL6Q9BWW8 343 aa12.84□□□□□ -0.35
COL12A1-202ENST00000345356 AURKCQ9UQB9 309 aa12.84□□□□□ -0.35
COL12A1-202ENST00000345356 hCG_1984214I3L0E3 225 aa12.84□□□□□ -0.35
COL12A1-202ENST00000345356 SRGAP2BP0DMP2 458 aa12.84□□□□□ -0.35
COL12A1-202ENST00000345356 SERPINB1P30740 379 aa12.84□□□□□ -0.35
COL12A1-202ENST00000345356 CHRNDQ07001 517 aa12.84□□□□□ -0.35
COL12A1-202ENST00000345356 TMTC4Q5T4D3 741 aa12.84□□□□□ -0.35
COL12A1-202ENST00000345356 USP17L2Q6R6M4 530 aa12.84□□□□□ -0.35
COL12A1-202ENST00000345356 ZNF713Q8N859 430 aaPredicted RBP12.84□□□□□ -0.35
COL12A1-202ENST00000345356 ATL2Q8NHH9 583 aa12.84□□□□□ -0.35
COL12A1-202ENST00000345356 SLC35G2Q8TBE7 412 aa12.84□□□□□ -0.35
COL12A1-202ENST00000345356 AGR3Q8TD06 166 aa12.84□□□□□ -0.35
COL12A1-202ENST00000345356 CAVIN3Q969G5 261 aa12.84□□□□□ -0.35
COL12A1-202ENST00000345356 IL25Q9H293 177 aa12.84□□□□□ -0.35
COL12A1-202ENST00000345356 ADNPQ9H2P0 1102 aa12.84□□□□□ -0.35
COL12A1-202ENST00000345356 AARSP49588 968 aaKnown RBP eCLIP12.84□□□□□ -0.35
COL12A1-202ENST00000345356 ARSEP51690 589 aa12.84□□□□□ -0.35
COL12A1-202ENST00000345356 TSPY1Q01534 308 aa12.84□□□□□ -0.35
COL12A1-202ENST00000345356 RFX7Q2KHR2 1363 aa12.84□□□□□ -0.35
COL12A1-202ENST00000345356 O00370 1275 aa12.84□□□□□ -0.35
COL12A1-202ENST00000345356 GUCY1A2P33402 732 aa12.84□□□□□ -0.35
COL12A1-202ENST00000345356 LVRNQ6Q4G3 990 aa12.84□□□□□ -0.35
COL12A1-202ENST00000345356 MYLK4Q86YV6 388 aaPredicted RBP12.84□□□□□ -0.35
COL12A1-202ENST00000345356 KANSL2Q9H9L4 492 aa12.84□□□□□ -0.35
COL12A1-202ENST00000345356 DUSP10Q9Y6W6 482 aa12.84□□□□□ -0.35
COL12A1-202ENST00000345356 SERPINI2O75830 405 aa12.83□□□□□ -0.35
COL12A1-202ENST00000345356 RAP1GDS1P52306 607 aa12.83□□□□□ -0.35
COL12A1-202ENST00000345356 HIF1AQ16665 826 aa12.83□□□□□ -0.35
COL12A1-202ENST00000345356 LZICQ8WZA0 190 aa12.83□□□□□ -0.35
COL12A1-202ENST00000345356 CATSPER2Q96P56 530 aa12.83□□□□□ -0.35
COL12A1-202ENST00000345356 OSBPL8Q9BZF1 889 aa12.83□□□□□ -0.35
COL12A1-202ENST00000345356 PABPC3Q9H361 631 aaKnown RBP12.83□□□□□ -0.35
COL12A1-202ENST00000345356 RPS6KA5O75582 802 aa12.83□□□□□ -0.36
COL12A1-202ENST00000345356 IL10P22301 178 aa12.83□□□□□ -0.36
COL12A1-202ENST00000345356 KLRC1P26715 233 aa12.83□□□□□ -0.36
COL12A1-202ENST00000345356 SOX5P35711 763 aa12.83□□□□□ -0.36
COL12A1-202ENST00000345356 ATXN3P54252 364 aaPredicted RBP12.83□□□□□ -0.36
COL12A1-202ENST00000345356 POTEAQ6S8J7 498 aa12.83□□□□□ -0.36
COL12A1-202ENST00000345356 USP49Q70CQ1 688 aa12.83□□□□□ -0.36
COL12A1-202ENST00000345356 ZNF507Q8TCN5 953 aa12.83□□□□□ -0.36
COL12A1-202ENST00000345356 EPS8L3Q8TE67 593 aaKnown RBP12.83□□□□□ -0.36
COL12A1-202ENST00000345356 ANKS1AQ92625 1134 aa12.83□□□□□ -0.36
COL12A1-202ENST00000345356 NCLNQ969V3 563 aa12.83□□□□□ -0.36
COL12A1-202ENST00000345356 CAAP1Q9H8G2 361 aa12.83□□□□□ -0.36
COL12A1-202ENST00000345356 PSMC3IPQ9P2W1 217 aaPredicted RBP12.83□□□□□ -0.36
COL12A1-202ENST00000345356 SEPT3Q9UH03 358 aa12.83□□□□□ -0.36
COL12A1-202ENST00000345356 SUN2Q9UH99 717 aa12.83□□□□□ -0.36
COL12A1-202ENST00000345356 PHTF1Q9UMS5 762 aa12.83□□□□□ -0.36
COL12A1-202ENST00000345356 ATP10DQ9P241 1426 aa12.83□□□□□ -0.36
COL12A1-202ENST00000345356 H0Y626 953 aa12.83□□□□□ -0.36
COL12A1-202ENST00000345356 TRIM16O95361 564 aa12.83□□□□□ -0.36
COL12A1-202ENST00000345356 CD58P19256 250 aa12.83□□□□□ -0.36
COL12A1-202ENST00000345356 ATP4AP20648 1035 aa12.83□□□□□ -0.36
COL12A1-202ENST00000345356 COPB2P35606 906 aa12.83□□□□□ -0.36
COL12A1-202ENST00000345356 MKRN4PQ13434 485 aaPredicted RBP12.83□□□□□ -0.36
COL12A1-202ENST00000345356 SYDE1Q6ZW31 735 aaPredicted RBP12.83□□□□□ -0.36
COL12A1-202ENST00000345356 PRPF39Q86UA1 669 aaKnown RBP12.83□□□□□ -0.36
COL12A1-202ENST00000345356 CCNYL1Q8N7R7 359 aa12.83□□□□□ -0.36
COL12A1-202ENST00000345356 RMDN2Q96LZ7 410 aa12.83□□□□□ -0.36
COL12A1-202ENST00000345356 INTS2Q9H0H0 1204 aaKnown RBP12.83□□□□□ -0.36
COL12A1-202ENST00000345356 UTP6Q9NYH9 597 aaKnown RBP12.83□□□□□ -0.36
COL12A1-202ENST00000345356 DTNAQ9Y4J8 743 aa12.83□□□□□ -0.36
COL12A1-202ENST00000345356 FOXP2O15409 715 aa12.83□□□□□ -0.36
COL12A1-202ENST00000345356 STRNO43815 780 aa12.83□□□□□ -0.36
COL12A1-202ENST00000345356 GCLMP48507 274 aa12.83□□□□□ -0.36
COL12A1-202ENST00000345356 GALCP54803 685 aa12.83□□□□□ -0.36
COL12A1-202ENST00000345356 ELF3P78545 371 aaPredicted RBP12.83□□□□□ -0.36
COL12A1-202ENST00000345356 TBC1D9BQ66K14 1250 aa12.83□□□□□ -0.36
COL12A1-202ENST00000345356 IZUMO2Q6UXV1 221 aa12.83□□□□□ -0.36
COL12A1-202ENST00000345356 RHPN2Q8IUC4 686 aa12.83□□□□□ -0.36
COL12A1-202ENST00000345356 HPS3Q969F9 1004 aa12.83□□□□□ -0.36
COL12A1-202ENST00000345356 PBXIP1Q96AQ6 731 aa12.83□□□□□ -0.36
COL12A1-202ENST00000345356 SH3GL2Q99962 352 aa12.83□□□□□ -0.36
COL12A1-202ENST00000345356 AMNQ9BXJ7 453 aa12.83□□□□□ -0.36
COL12A1-202ENST00000345356 GOLPH3Q9H4A6 298 aa12.83□□□□□ -0.36
COL12A1-202ENST00000345356 KMT5AQ9NQR1 393 aa12.83□□□□□ -0.36
COL12A1-202ENST00000345356 A0A1W2PQJ5 194 aa12.83□□□□□ -0.36
COL12A1-202ENST00000345356 ZNF189O75820 626 aaPredicted RBP12.83□□□□□ -0.36
COL12A1-202ENST00000345356 ARL4AP40617 200 aa12.83□□□□□ -0.36
COL12A1-202ENST00000345356 RFC5P40937 340 aa12.83□□□□□ -0.36
COL12A1-202ENST00000345356 GJC2Q5T442 439 aaPredicted RBP12.83□□□□□ -0.36
COL12A1-202ENST00000345356 DDI1Q8WTU0 396 aa12.83□□□□□ -0.36
COL12A1-202ENST00000345356 MPP4Q96JB8 637 aa12.83□□□□□ -0.36
COL12A1-202ENST00000345356 ZNF577Q9BSK1 485 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms