RNA–Protein interactions for RNA: ENST00000344921.10

SMARCB1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 2 BASIC

Gene SMARCB1, Length 1,728 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-202ENST00000344921 YME1L1Q96TA2 773 aa22.93■■□□□ 1.26
SMARCB1-202ENST00000344921 GOLPH3LQ9H4A5 285 aa22.93■■□□□ 1.26
SMARCB1-202ENST00000344921 PCDHA11Q9Y5I1 949 aa22.93■■□□□ 1.26
SMARCB1-202ENST00000344921 TTC3P53804 2025 aa22.92■■□□□ 1.26
SMARCB1-202ENST00000344921 SLFN14P0C7P3 912 aa22.92■■□□□ 1.26
SMARCB1-202ENST00000344921 MYOGP15173 224 aa22.92■■□□□ 1.26
SMARCB1-202ENST00000344921 ARF4P18085 180 aaPredicted RBP22.92■■□□□ 1.26
SMARCB1-202ENST00000344921 DNAJB2P25686 324 aa22.92■■□□□ 1.26
SMARCB1-202ENST00000344921 AMHR2Q16671 573 aa22.92■■□□□ 1.26
SMARCB1-202ENST00000344921 LONRF3Q496Y0 759 aa22.92■■□□□ 1.26
SMARCB1-202ENST00000344921 FAM178BQ8IXR5 827 aa22.92■■□□□ 1.26
SMARCB1-202ENST00000344921 DNAJC19Q96DA6 116 aa22.92■■□□□ 1.26
SMARCB1-202ENST00000344921 RAD9AQ99638 391 aa22.92■■□□□ 1.26
SMARCB1-202ENST00000344921 CCDC113Q9H0I3 377 aa22.92■■□□□ 1.26
SMARCB1-202ENST00000344921 TMEM134Q9H6X4 195 aa22.92■■□□□ 1.26
SMARCB1-202ENST00000344921 ARHGAP28Q9P2N2 729 aa22.92■■□□□ 1.26
SMARCB1-202ENST00000344921 USP25Q9UHP3 1055 aa22.92■■□□□ 1.26
SMARCB1-202ENST00000344921 INSL6Q9Y581 213 aa22.92■■□□□ 1.26
SMARCB1-202ENST00000344921 GBF1Q92538 1859 aa22.92■■□□□ 1.26
SMARCB1-202ENST00000344921 PHLPP2Q6ZVD8 1323 aa22.92■■□□□ 1.26
SMARCB1-202ENST00000344921 A0A0U1RQF3 1178 aa22.91■■□□□ 1.26
SMARCB1-202ENST00000344921 H0YCG3 227 aa22.91■■□□□ 1.26
SMARCB1-202ENST00000344921 K7ENM7 598 aa22.91■■□□□ 1.26
SMARCB1-202ENST00000344921 ACKR2O00590 384 aa22.91■■□□□ 1.26
SMARCB1-202ENST00000344921 STRN3Q13033 797 aa22.91■■□□□ 1.26
SMARCB1-202ENST00000344921 FAM187BQ17R55 369 aa22.91■■□□□ 1.26
SMARCB1-202ENST00000344921 PPP4R3CPQ6ZMV5 832 aa22.91■■□□□ 1.26
SMARCB1-202ENST00000344921 FAM105AQ9NUU6 356 aa22.91■■□□□ 1.26
SMARCB1-202ENST00000344921 PANK4Q9NVE7 773 aa22.91■■□□□ 1.26
SMARCB1-202ENST00000344921 USP20Q9Y2K6 914 aa22.91■■□□□ 1.26
SMARCB1-202ENST00000344921 FAM237AA0A1B0GTK4 181 aa22.91■■□□□ 1.26
SMARCB1-202ENST00000344921 ACTN4O43707 911 aaKnown RBP22.91■■□□□ 1.26
SMARCB1-202ENST00000344921 SKIP12755 728 aa22.91■■□□□ 1.26
SMARCB1-202ENST00000344921 ASIC1P78348 528 aa22.91■■□□□ 1.26
SMARCB1-202ENST00000344921 HERC4Q5GLZ8 1057 aaPredicted RBP22.91■■□□□ 1.26
SMARCB1-202ENST00000344921 HAUS6Q7Z4H7 955 aa22.91■■□□□ 1.26
SMARCB1-202ENST00000344921 CDR2LQ86X02 465 aaPredicted RBP22.91■■□□□ 1.26
SMARCB1-202ENST00000344921 SFR1Q86XK3 245 aa22.91■■□□□ 1.26
SMARCB1-202ENST00000344921 ECHDC2Q86YB7 292 aa22.91■■□□□ 1.26
SMARCB1-202ENST00000344921 CCDC65Q8IXS2 484 aa22.91■■□□□ 1.26
SMARCB1-202ENST00000344921 TMEM161BQ8NDZ6 487 aa22.91■■□□□ 1.26
SMARCB1-202ENST00000344921 TRIM9Q9C026 710 aa22.91■■□□□ 1.26
SMARCB1-202ENST00000344921 TRIM6Q9C030 488 aaPredicted RBP22.91■■□□□ 1.26
SMARCB1-202ENST00000344921 TMEM161AQ9NX61 479 aa22.91■■□□□ 1.26
SMARCB1-202ENST00000344921 YBX2Q9Y2T7 364 aaKnown RBP22.91■■□□□ 1.26
SMARCB1-202ENST00000344921 ZNF202O95125 648 aa22.9■■□□□ 1.26
SMARCB1-202ENST00000344921 GAP43P17677 238 aa22.9■■□□□ 1.26
SMARCB1-202ENST00000344921 RAB27AP51159 221 aa22.9■■□□□ 1.26
SMARCB1-202ENST00000344921 NCKAP1LP55160 1127 aa22.9■■□□□ 1.26
SMARCB1-202ENST00000344921 FAM189BP81408 668 aa22.9■■□□□ 1.26
SMARCB1-202ENST00000344921 GRAMD1CQ8IYS0 662 aa22.9■■□□□ 1.26
SMARCB1-202ENST00000344921 CNNM3Q8NE01 707 aa22.9■■□□□ 1.26
SMARCB1-202ENST00000344921 TIFAQ96CG3 184 aa22.9■■□□□ 1.26
SMARCB1-202ENST00000344921 BLZF1Q9H2G9 400 aa22.9■■□□□ 1.26
SMARCB1-202ENST00000344921 NKX2-4Q9H2Z4 354 aa22.9■■□□□ 1.26
SMARCB1-202ENST00000344921 SLC28A3Q9HAS3 691 aa22.9■■□□□ 1.26
SMARCB1-202ENST00000344921 CNTNAP2Q9UHC6 1331 aa22.89■■□□□ 1.26
SMARCB1-202ENST00000344921 CA3P07451 260 aa22.89■■□□□ 1.26
SMARCB1-202ENST00000344921 CCDC51Q96ER9 411 aa22.89■■□□□ 1.26
SMARCB1-202ENST00000344921 PAGE5Q96GU1 130 aa22.89■■□□□ 1.26
SMARCB1-202ENST00000344921 TRAIPQ9BWF2 469 aa22.89■■□□□ 1.26
SMARCB1-202ENST00000344921 ELAC1Q9H777 363 aaKnown RBP22.89■■□□□ 1.26
SMARCB1-202ENST00000344921 MRPL44Q9H9J2 332 aaKnown RBP22.89■■□□□ 1.26
SMARCB1-202ENST00000344921 TBC1D7Q9P0N9 293 aa22.89■■□□□ 1.26
SMARCB1-202ENST00000344921 SEL1LQ9UBV2 794 aa22.89■■□□□ 1.26
SMARCB1-202ENST00000344921 PCDHB2Q9Y5E7 798 aa22.89■■□□□ 1.26
SMARCB1-202ENST00000344921 A0A1B0GUA9 196 aa22.88■■□□□ 1.25
SMARCB1-202ENST00000344921 TTLL13PA6NNM8 815 aa22.88■■□□□ 1.25
SMARCB1-202ENST00000344921 EOMESO95936 686 aa22.88■■□□□ 1.25
SMARCB1-202ENST00000344921 MAPTP10636 758 aaKnown RBP22.88■■□□□ 1.25
SMARCB1-202ENST00000344921 CASP1P29466 404 aa22.88■■□□□ 1.25
SMARCB1-202ENST00000344921 NMT1P30419 496 aaKnown RBP22.88■■□□□ 1.25
SMARCB1-202ENST00000344921 FXR1P51114 621 aaKnown RBP eCLIP22.88■■□□□ 1.25
SMARCB1-202ENST00000344921 SLC27A1Q6PCB7 646 aa22.88■■□□□ 1.25
SMARCB1-202ENST00000344921 SLC17A8Q8NDX2 589 aa22.88■■□□□ 1.25
SMARCB1-202ENST00000344921 C7orf25Q9BPX7 421 aa22.88■■□□□ 1.25
SMARCB1-202ENST00000344921 ADPGKQ9BRR6 497 aa22.88■■□□□ 1.25
SMARCB1-202ENST00000344921 ANP32EQ9BTT0 268 aa22.88■■□□□ 1.25
SMARCB1-202ENST00000344921 MRPL4Q9BYD3 311 aaKnown RBP22.88■■□□□ 1.25
SMARCB1-202ENST00000344921 N4BP3O15049 544 aa22.88■■□□□ 1.25
SMARCB1-202ENST00000344921 DGKIO75912 1065 aa22.88■■□□□ 1.25
SMARCB1-202ENST00000344921 HTRA4P83105 476 aaPredicted RBP22.88■■□□□ 1.25
SMARCB1-202ENST00000344921 ATF7IP2Q5U623 682 aa22.88■■□□□ 1.25
SMARCB1-202ENST00000344921 PPP2R2DQ66LE6 453 aa22.88■■□□□ 1.25
SMARCB1-202ENST00000344921 TAS1R3Q7RTX0 852 aa22.88■■□□□ 1.25
SMARCB1-202ENST00000344921 CRIPAKQ8N1N5 446 aa22.88■■□□□ 1.25
SMARCB1-202ENST00000344921 BICD1Q96G01 975 aa22.88■■□□□ 1.25
SMARCB1-202ENST00000344921 CCDC34Q96HJ3 373 aa22.88■■□□□ 1.25
SMARCB1-202ENST00000344921 EIF2AQ9BY44 585 aaKnown RBP22.88■■□□□ 1.25
SMARCB1-202ENST00000344921 LCHNA4D1U4 455 aa22.87■■□□□ 1.25
SMARCB1-202ENST00000344921 NPTXRO95502 500 aa22.87■■□□□ 1.25
SMARCB1-202ENST00000344921 EDN1P05305 212 aa22.87■■□□□ 1.25
SMARCB1-202ENST00000344921 CUL4BQ13620 913 aa22.87■■□□□ 1.25
SMARCB1-202ENST00000344921 UBXN11Q5T124 520 aa22.87■■□□□ 1.25
SMARCB1-202ENST00000344921 NT5DC1Q5TFE4 455 aa22.87■■□□□ 1.25
SMARCB1-202ENST00000344921 KRBA2Q6ZNG9 492 aa22.87■■□□□ 1.25
SMARCB1-202ENST00000344921 ABI1Q8IZP0 508 aa22.87■■□□□ 1.25
SMARCB1-202ENST00000344921 PGBD4Q96DM1 585 aa22.87■■□□□ 1.25
SMARCB1-202ENST00000344921 HOXA2O43364 376 aa22.86■■□□□ 1.25
SMARCB1-202ENST00000344921 GADD45BO75293 160 aaPredicted RBP22.86■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms