RNA–Protein interactions for RNA: ENST00000343599.5

ZNF540-202, Transcript of zinc finger protein 540, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ZNF540, Length 3,073 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-202ENST00000343599 CC2D1AQ6P1N0 951 aaPredicted RBP8.1□□□□□ -1.11
ZNF540-202ENST00000343599 CWC27Q6UX04 472 aaKnown RBP8.1□□□□□ -1.11
ZNF540-202ENST00000343599 MFSD6Q6ZSS7 791 aa8.1□□□□□ -1.11
ZNF540-202ENST00000343599 AGXT2Q9BYV1 514 aa8.1□□□□□ -1.11
ZNF540-202ENST00000343599 TRIM6Q9C030 488 aaPredicted RBP8.1□□□□□ -1.11
ZNF540-202ENST00000343599 JMJD4Q9H9V9 463 aa8.1□□□□□ -1.11
ZNF540-202ENST00000343599 RIC8AQ9NPQ8 531 aa8.1□□□□□ -1.11
ZNF540-202ENST00000343599 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP8.1□□□□□ -1.11
ZNF540-202ENST00000343599 TRIP12Q14669 1992 aaPredicted RBP8.09□□□□□ -1.11
ZNF540-202ENST00000343599 H3BRB1 525 aa8.09□□□□□ -1.11
ZNF540-202ENST00000343599 M0QZ92 97 aa8.09□□□□□ -1.11
ZNF540-202ENST00000343599 KINO60870 393 aaKnown RBP8.09□□□□□ -1.11
ZNF540-202ENST00000343599 ERLIN2O94905 339 aa8.09□□□□□ -1.11
ZNF540-202ENST00000343599 SCG2P13521 617 aa8.09□□□□□ -1.11
ZNF540-202ENST00000343599 UBA1P22314 1058 aaKnown RBP8.09□□□□□ -1.11
ZNF540-202ENST00000343599 ELAVL2Q12926 359 aaKnown RBP8.09□□□□□ -1.11
ZNF540-202ENST00000343599 CUL4AQ13619 759 aa8.09□□□□□ -1.11
ZNF540-202ENST00000343599 SLC5A9Q2M3M2 681 aa8.09□□□□□ -1.11
ZNF540-202ENST00000343599 Q4G0T1 1027 aa8.09□□□□□ -1.11
ZNF540-202ENST00000343599 WWC2Q6AWC2 1192 aa8.09□□□□□ -1.11
ZNF540-202ENST00000343599 LAIR1Q6GTX8 287 aa8.09□□□□□ -1.11
ZNF540-202ENST00000343599 CPLX2Q6PUV4 134 aaKnown RBP8.09□□□□□ -1.11
ZNF540-202ENST00000343599 ZNF687Q8N1G0 1237 aa8.09□□□□□ -1.11
ZNF540-202ENST00000343599 FAM200AQ8TCP9 573 aa8.09□□□□□ -1.11
ZNF540-202ENST00000343599 BICD2Q8TD16 824 aa8.09□□□□□ -1.11
ZNF540-202ENST00000343599 TMX3Q96JJ7 454 aa8.09□□□□□ -1.11
ZNF540-202ENST00000343599 PHOX2BQ99453 314 aa8.09□□□□□ -1.11
ZNF540-202ENST00000343599 TUT1Q9H6E5 874 aaKnown RBP8.09□□□□□ -1.11
ZNF540-202ENST00000343599 PUF60Q9UHX1 559 aaKnown RBP8.09□□□□□ -1.11
ZNF540-202ENST00000343599 MAD2L2Q9UI95 211 aa8.09□□□□□ -1.11
ZNF540-202ENST00000343599 FAM196BA6NMK8 535 aa8.09□□□□□ -1.11
ZNF540-202ENST00000343599 MAN2B1O00754 1011 aa8.09□□□□□ -1.11
ZNF540-202ENST00000343599 MYBL2P10244 700 aa8.09□□□□□ -1.11
ZNF540-202ENST00000343599 SRFP11831 508 aa8.09□□□□□ -1.11
ZNF540-202ENST00000343599 UBE2HP62256 183 aa8.09□□□□□ -1.11
ZNF540-202ENST00000343599 PRAMEF19Q5SWL8 479 aa8.09□□□□□ -1.11
ZNF540-202ENST00000343599 SLC30A10Q6XR72 485 aa8.09□□□□□ -1.11
ZNF540-202ENST00000343599 LRRC8AQ8IWT6 810 aa8.09□□□□□ -1.11
ZNF540-202ENST00000343599 CCAR2Q8N163 923 aaKnown RBP8.09□□□□□ -1.11
ZNF540-202ENST00000343599 DTWD2Q8NBA8 298 aa8.09□□□□□ -1.11
ZNF540-202ENST00000343599 LRRN4CLQ8ND94 238 aa8.09□□□□□ -1.11
ZNF540-202ENST00000343599 CUL5Q93034 780 aa8.09□□□□□ -1.11
ZNF540-202ENST00000343599 INTS4Q96HW7 963 aaKnown RBP8.09□□□□□ -1.11
ZNF540-202ENST00000343599 IRAK4Q9NWZ3 460 aa8.09□□□□□ -1.11
ZNF540-202ENST00000343599 HDAC6Q9UBN7 1215 aa8.09□□□□□ -1.11
ZNF540-202ENST00000343599 OBSL1O75147 1896 aa8.09□□□□□ -1.11
ZNF540-202ENST00000343599 CYP2D6P10635 497 aa8.09□□□□□ -1.12
ZNF540-202ENST00000343599 EPHA5P54756 1037 aa8.09□□□□□ -1.12
ZNF540-202ENST00000343599 SMARCB1Q12824 385 aa8.09□□□□□ -1.12
ZNF540-202ENST00000343599 DYNLL2Q96FJ2 89 aa8.09□□□□□ -1.12
ZNF540-202ENST00000343599 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP8.09□□□□□ -1.12
ZNF540-202ENST00000343599 TPX2Q9ULW0 747 aaKnown RBP8.09□□□□□ -1.12
ZNF540-202ENST00000343599 H3BQF6 201 aa8.08□□□□□ -1.12
ZNF540-202ENST00000343599 LZTS3O60299 673 aaPredicted RBP8.08□□□□□ -1.12
ZNF540-202ENST00000343599 CNTN2Q02246 1040 aa8.08□□□□□ -1.12
ZNF540-202ENST00000343599 SCRN1Q12765 414 aa8.08□□□□□ -1.12
ZNF540-202ENST00000343599 TARBP2Q15633 366 aaKnown RBP8.08□□□□□ -1.12
ZNF540-202ENST00000343599 ARHGEF16Q5VV41 709 aa8.08□□□□□ -1.12
ZNF540-202ENST00000343599 EMILIN2Q9BXX0 1053 aa8.08□□□□□ -1.12
ZNF540-202ENST00000343599 FUT8Q9BYC5 575 aa8.08□□□□□ -1.12
ZNF540-202ENST00000343599 RNF19AQ9NV58 838 aa8.08□□□□□ -1.12
ZNF540-202ENST00000343599 FBXO28Q9NVF7 368 aa8.08□□□□□ -1.12
ZNF540-202ENST00000343599 ARHGEF37A1IGU5 675 aa8.08□□□□□ -1.12
ZNF540-202ENST00000343599 TSPY2A6NKD2 308 aa8.08□□□□□ -1.12
ZNF540-202ENST00000343599 MAP2K7O14733 419 aa8.08□□□□□ -1.12
ZNF540-202ENST00000343599 SLC30A4O14863 429 aa8.08□□□□□ -1.12
ZNF540-202ENST00000343599 SEC31AO94979 1220 aaKnown RBP8.08□□□□□ -1.12
ZNF540-202ENST00000343599 CCDC192P0DO97 292 aa8.08□□□□□ -1.12
ZNF540-202ENST00000343599 RPS6KA3P51812 740 aa8.08□□□□□ -1.12
ZNF540-202ENST00000343599 CCNHP51946 323 aaPredicted RBP8.08□□□□□ -1.12
ZNF540-202ENST00000343599 PLS1Q14651 629 aa8.08□□□□□ -1.12
ZNF540-202ENST00000343599 PREPLQ4J6C6 727 aaPredicted RBP8.08□□□□□ -1.12
ZNF540-202ENST00000343599 MARCH8Q5T0T0 291 aa8.08□□□□□ -1.12
ZNF540-202ENST00000343599 WDR5BQ86VZ2 330 aa8.08□□□□□ -1.12
ZNF540-202ENST00000343599 FBXO16Q8IX29 292 aaPredicted RBP8.08□□□□□ -1.12
ZNF540-202ENST00000343599 CELF5Q8N6W0 485 aaKnown RBP8.08□□□□□ -1.12
ZNF540-202ENST00000343599 CTCFLQ8NI51 663 aaPredicted RBP8.08□□□□□ -1.12
ZNF540-202ENST00000343599 SDR42E1Q8WUS8 393 aa8.08□□□□□ -1.12
ZNF540-202ENST00000343599 KIFC2Q96AC6 838 aa8.08□□□□□ -1.12
ZNF540-202ENST00000343599 WBP1Q96G27 269 aa8.08□□□□□ -1.12
ZNF540-202ENST00000343599 SPACA7Q96KW9 195 aa8.08□□□□□ -1.12
ZNF540-202ENST00000343599 RMDN3Q96TC7 470 aa8.08□□□□□ -1.12
ZNF540-202ENST00000343599 BAG1Q99933 345 aaPredicted RBP8.08□□□□□ -1.12
ZNF540-202ENST00000343599 SPG21Q9NZD8 308 aa8.08□□□□□ -1.12
ZNF540-202ENST00000343599 FAN1Q9Y2M0 1017 aa8.08□□□□□ -1.12
ZNF540-202ENST00000343599 BACE2Q9Y5Z0 518 aa8.08□□□□□ -1.12
ZNF540-202ENST00000343599 TCHHQ07283 1943 aa8.07□□□□□ -1.12
ZNF540-202ENST00000343599 MEIS1O00470 390 aa8.07□□□□□ -1.12
ZNF540-202ENST00000343599 CDK4P11802 303 aa8.07□□□□□ -1.12
ZNF540-202ENST00000343599 ZNF268Q14587 947 aaPredicted RBP8.07□□□□□ -1.12
ZNF540-202ENST00000343599 PDCD2Q16342 344 aaPredicted RBP8.07□□□□□ -1.12
ZNF540-202ENST00000343599 IMMTQ16891 758 aaKnown RBP8.07□□□□□ -1.12
ZNF540-202ENST00000343599 KIAA0753Q2KHM9 967 aa8.07□□□□□ -1.12
ZNF540-202ENST00000343599 WLSQ5T9L3 541 aa8.07□□□□□ -1.12
ZNF540-202ENST00000343599 RABEPKQ7Z6M1 372 aa8.07□□□□□ -1.12
ZNF540-202ENST00000343599 ADGRF4Q8IZF3 695 aa8.07□□□□□ -1.12
ZNF540-202ENST00000343599 MRPL43Q8N983 215 aaKnown RBP8.07□□□□□ -1.12
ZNF540-202ENST00000343599 TDRD5Q8NAT2 981 aaKnown RBP8.07□□□□□ -1.12
ZNF540-202ENST00000343599 KAT14Q9H8E8 782 aa8.07□□□□□ -1.12
ZNF540-202ENST00000343599 SPATS2LQ9NUQ6 558 aaKnown RBP8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms