RNA–Protein interactions for RNA: ENST00000343348.10

SEMA6A-202, Transcript of semaphorin 6A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEMA6A, Length 6,878 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6A-202ENST00000343348 USP17L11C9JVI0 530 aa12.9□□□□□ -0.34
SEMA6A-202ENST00000343348 USP17L18D6R9N7 530 aa12.9□□□□□ -0.34
SEMA6A-202ENST00000343348 USP17L22D6RA61 530 aa12.9□□□□□ -0.34
SEMA6A-202ENST00000343348 USP17L17D6RBQ6 530 aa12.9□□□□□ -0.34
SEMA6A-202ENST00000343348 USP17L19D6RCP7 530 aa12.9□□□□□ -0.34
SEMA6A-202ENST00000343348 USP17L20D6RJB6 530 aa12.9□□□□□ -0.34
SEMA6A-202ENST00000343348 USP17L24Q0WX57 530 aa12.9□□□□□ -0.34
SEMA6A-202ENST00000343348 NECTIN1Q15223 517 aa12.9□□□□□ -0.34
SEMA6A-202ENST00000343348 IZUMO3Q5VZ72 239 aa12.9□□□□□ -0.34
SEMA6A-202ENST00000343348 USP17L6PQ6QN14 398 aa12.9□□□□□ -0.34
SEMA6A-202ENST00000343348 CYGBQ8WWM9 190 aa12.9□□□□□ -0.34
SEMA6A-202ENST00000343348 MOCS2O96007 188 aaPredicted RBP12.9□□□□□ -0.34
SEMA6A-202ENST00000343348 TCN1P20061 433 aaPredicted RBP12.9□□□□□ -0.34
SEMA6A-202ENST00000343348 ARSEP51690 589 aa12.9□□□□□ -0.34
SEMA6A-202ENST00000343348 KIAA1755Q5JYT7 1200 aa12.9□□□□□ -0.34
SEMA6A-202ENST00000343348 RARS2Q5T160 578 aaKnown RBP12.9□□□□□ -0.34
SEMA6A-202ENST00000343348 RHPN2Q8IUC4 686 aa12.9□□□□□ -0.34
SEMA6A-202ENST00000343348 GALNT4Q8N4A0 578 aa12.9□□□□□ -0.34
SEMA6A-202ENST00000343348 OR6P1Q8NGX9 317 aa12.9□□□□□ -0.34
SEMA6A-202ENST00000343348 SCG3Q8WXD2 468 aaKnown RBP12.9□□□□□ -0.34
SEMA6A-202ENST00000343348 GCNAQ96QF7 691 aa12.9□□□□□ -0.34
SEMA6A-202ENST00000343348 LRRC1Q9BTT6 524 aa12.9□□□□□ -0.34
SEMA6A-202ENST00000343348 EHD2Q9NZN4 543 aa12.9□□□□□ -0.34
SEMA6A-202ENST00000343348 NIPSNAP3AQ9UFN0 247 aaPredicted RBP12.9□□□□□ -0.34
SEMA6A-202ENST00000343348 POTEFA5A3E0 1075 aa12.9□□□□□ -0.34
SEMA6A-202ENST00000343348 POTEIP0CG38 1075 aa12.9□□□□□ -0.34
SEMA6A-202ENST00000343348 ADORA2BP29275 332 aa12.9□□□□□ -0.34
SEMA6A-202ENST00000343348 MRPL28Q13084 256 aaKnown RBP12.9□□□□□ -0.34
SEMA6A-202ENST00000343348 TBC1D9BQ66K14 1250 aa12.9□□□□□ -0.34
SEMA6A-202ENST00000343348 POTEGQ6S5H5 508 aa12.9□□□□□ -0.34
SEMA6A-202ENST00000343348 POTEEQ6S8J3 1075 aa12.9□□□□□ -0.34
SEMA6A-202ENST00000343348 TAS2R42Q7RTR8 314 aa12.9□□□□□ -0.34
SEMA6A-202ENST00000343348 SIRT2Q8IXJ6 389 aa12.9□□□□□ -0.34
SEMA6A-202ENST00000343348 SIK2Q9H0K1 926 aa12.9□□□□□ -0.34
SEMA6A-202ENST00000343348 LEMD3Q9Y2U8 911 aa12.9□□□□□ -0.34
SEMA6A-202ENST00000343348 DAB1O75553 588 aa12.9□□□□□ -0.34
SEMA6A-202ENST00000343348 RPS6P62753 249 aaKnown RBP12.9□□□□□ -0.34
SEMA6A-202ENST00000343348 HEATR6Q6AI08 1181 aaKnown RBP12.9□□□□□ -0.34
SEMA6A-202ENST00000343348 CYFIP1Q7L576 1253 aa12.9□□□□□ -0.34
SEMA6A-202ENST00000343348 CATSPER4Q7RTX7 472 aa12.9□□□□□ -0.34
SEMA6A-202ENST00000343348 CIITAP33076 1130 aa12.9□□□□□ -0.34
SEMA6A-202ENST00000343348 VAMP7P51809 220 aa12.9□□□□□ -0.34
SEMA6A-202ENST00000343348 ZNF568Q3ZCX4 644 aa12.9□□□□□ -0.34
SEMA6A-202ENST00000343348 ACCSLQ4AC99 568 aa12.9□□□□□ -0.34
SEMA6A-202ENST00000343348 RNF219Q5W0B1 726 aaPredicted RBP12.9□□□□□ -0.34
SEMA6A-202ENST00000343348 CNKSR1Q969H4 720 aa12.9□□□□□ -0.34
SEMA6A-202ENST00000343348 HPCAL4Q9UM19 191 aa12.9□□□□□ -0.34
SEMA6A-202ENST00000343348 NPHP3-ACAD11A0A0J9YXS1 232 aa12.89□□□□□ -0.35
SEMA6A-202ENST00000343348 TTC26A0AVF1 554 aa12.89□□□□□ -0.35
SEMA6A-202ENST00000343348 TRIM66O15016 1216 aa12.89□□□□□ -0.35
SEMA6A-202ENST00000343348 TYK2P29597 1187 aa12.89□□□□□ -0.35
SEMA6A-202ENST00000343348 PTK2BQ14289 1009 aa12.89□□□□□ -0.35
SEMA6A-202ENST00000343348 ADCK1Q86TW2 530 aa12.89□□□□□ -0.35
SEMA6A-202ENST00000343348 RAD54LQ92698 747 aa12.89□□□□□ -0.35
SEMA6A-202ENST00000343348 INPP5DQ92835 1189 aa12.89□□□□□ -0.35
SEMA6A-202ENST00000343348 TEX12Q9BXU0 123 aa12.89□□□□□ -0.35
SEMA6A-202ENST00000343348 FAM196BA6NMK8 535 aa12.89□□□□□ -0.35
SEMA6A-202ENST00000343348 KCNA2P16389 499 aa12.89□□□□□ -0.35
SEMA6A-202ENST00000343348 GPC3P51654 580 aa12.89□□□□□ -0.35
SEMA6A-202ENST00000343348 MTMR1Q13613 665 aa12.89□□□□□ -0.35
SEMA6A-202ENST00000343348 SURF1Q15526 300 aa12.89□□□□□ -0.35
SEMA6A-202ENST00000343348 LONRF1Q17RB8 773 aa12.89□□□□□ -0.35
SEMA6A-202ENST00000343348 WDR24Q96S15 920 aa12.89□□□□□ -0.35
SEMA6A-202ENST00000343348 DHX35Q9H5Z1 703 aaKnown RBP12.89□□□□□ -0.35
SEMA6A-202ENST00000343348 CYP26B1Q9NR63 512 aa12.89□□□□□ -0.35
SEMA6A-202ENST00000343348 ATP11BQ9Y2G3 1177 aa12.89□□□□□ -0.35
SEMA6A-202ENST00000343348 LCP1P13796 627 aa12.89□□□□□ -0.35
SEMA6A-202ENST00000343348 USP14P54578 494 aa12.89□□□□□ -0.35
SEMA6A-202ENST00000343348 NBPF20Q3BBV1 942 aa12.89□□□□□ -0.35
SEMA6A-202ENST00000343348 TEKT4Q8WW24 435 aa12.89□□□□□ -0.35
SEMA6A-202ENST00000343348 EPAS1Q99814 870 aa12.89□□□□□ -0.35
SEMA6A-202ENST00000343348 PZPP20742 1482 aa12.89□□□□□ -0.35
SEMA6A-202ENST00000343348 ARHGAP10A1A4S6 786 aa12.89□□□□□ -0.35
SEMA6A-202ENST00000343348 STK25O00506 426 aa12.89□□□□□ -0.35
SEMA6A-202ENST00000343348 SERPINB2P05120 415 aa12.89□□□□□ -0.35
SEMA6A-202ENST00000343348 COPB2P35606 906 aa12.89□□□□□ -0.35
SEMA6A-202ENST00000343348 RASGRF1Q13972 1273 aa12.89□□□□□ -0.35
SEMA6A-202ENST00000343348 HIC1Q14526 733 aa12.89□□□□□ -0.35
SEMA6A-202ENST00000343348 HPS3Q969F9 1004 aa12.89□□□□□ -0.35
SEMA6A-202ENST00000343348 SMAD5Q99717 465 aaKnown RBP12.89□□□□□ -0.35
SEMA6A-202ENST00000343348 SLC9A2Q9UBY0 812 aa12.89□□□□□ -0.35
SEMA6A-202ENST00000343348 SASH1O94885 1247 aa12.89□□□□□ -0.35
SEMA6A-202ENST00000343348 VSNL1P62760 191 aa12.89□□□□□ -0.35
SEMA6A-202ENST00000343348 CCDC92Q53HC0 331 aaPredicted RBP12.89□□□□□ -0.35
SEMA6A-202ENST00000343348 RABGAP1LQ5R372 815 aa12.89□□□□□ -0.35
SEMA6A-202ENST00000343348 FAM83BQ5T0W9 1011 aa12.89□□□□□ -0.35
SEMA6A-202ENST00000343348 SLFN12LQ6IEE8 588 aa12.89□□□□□ -0.35
SEMA6A-202ENST00000343348 TMEM154Q6P9G4 183 aa12.89□□□□□ -0.35
SEMA6A-202ENST00000343348 TBC1D10CQ8IV04 446 aa12.89□□□□□ -0.35
SEMA6A-202ENST00000343348 TMEM35BQ8NCS4 154 aa12.89□□□□□ -0.35
SEMA6A-202ENST00000343348 THAP11Q96EK4 314 aa12.89□□□□□ -0.35
SEMA6A-202ENST00000343348 AGAP3Q96P47 875 aa12.89□□□□□ -0.35
SEMA6A-202ENST00000343348 OLFM3Q96PB7 478 aa12.89□□□□□ -0.35
SEMA6A-202ENST00000343348 IRX2Q9BZI1 471 aaPredicted RBP12.89□□□□□ -0.35
SEMA6A-202ENST00000343348 PI4KBQ9UBF8 816 aa12.89□□□□□ -0.35
SEMA6A-202ENST00000343348 SNAP23O00161 211 aa12.89□□□□□ -0.35
SEMA6A-202ENST00000343348 ENO3P13929 434 aaPredicted RBP12.89□□□□□ -0.35
SEMA6A-202ENST00000343348 CCNA1P78396 465 aa12.89□□□□□ -0.35
SEMA6A-202ENST00000343348 MTM1Q13496 603 aa12.89□□□□□ -0.35
SEMA6A-202ENST00000343348 KRT39Q6A163 491 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms