RNA–Protein interactions for RNA: ENST00000342245.8

SMPD1-201, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMPD1, Length 2,452 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-201ENST00000342245 KLC3Q6P597 504 aa19.85■□□□□ 0.77
SMPD1-201ENST00000342245 TRIM59Q8IWR1 403 aa19.85■□□□□ 0.77
SMPD1-201ENST00000342245 TTLL11Q8NHH1 800 aa19.85■□□□□ 0.77
SMPD1-201ENST00000342245 GLG1Q92896 1179 aa19.85■□□□□ 0.77
SMPD1-201ENST00000342245 ZNF653Q96CK0 615 aa19.85■□□□□ 0.77
SMPD1-201ENST00000342245 RMI1Q9H9A7 625 aa19.85■□□□□ 0.77
SMPD1-201ENST00000342245 ANGPTL2Q9UKU9 493 aa19.85■□□□□ 0.77
SMPD1-201ENST00000342245 SYNGAP1Q96PV0 1343 aa19.85■□□□□ 0.77
SMPD1-201ENST00000342245 BTBD19C9JJ37 291 aa19.85■□□□□ 0.77
SMPD1-201ENST00000342245 CAPN9O14815 690 aa19.85■□□□□ 0.77
SMPD1-201ENST00000342245 PRKAB2O43741 272 aa19.85■□□□□ 0.77
SMPD1-201ENST00000342245 CCDC22O60826 627 aa19.85■□□□□ 0.77
SMPD1-201ENST00000342245 PABPC4LP0CB38 370 aaKnown RBP19.85■□□□□ 0.77
SMPD1-201ENST00000342245 ATF3P18847 181 aa19.85■□□□□ 0.77
SMPD1-201ENST00000342245 MOGSQ13724 837 aa19.85■□□□□ 0.77
SMPD1-201ENST00000342245 SLC45A4Q5BKX6 768 aa19.85■□□□□ 0.77
SMPD1-201ENST00000342245 MARK2Q7KZI7 788 aaKnown RBP19.85■□□□□ 0.77
SMPD1-201ENST00000342245 MYOCDQ8IZQ8 938 aa19.85■□□□□ 0.77
SMPD1-201ENST00000342245 ANKRD35Q8N283 1001 aa19.85■□□□□ 0.77
SMPD1-201ENST00000342245 SPATA5Q8NB90 893 aa19.85■□□□□ 0.77
SMPD1-201ENST00000342245 PHACTR1Q9C0D0 580 aa19.85■□□□□ 0.77
SMPD1-201ENST00000342245 NCANO14594 1321 aa19.85■□□□□ 0.77
SMPD1-201ENST00000342245 PFASO15067 1338 aa19.85■□□□□ 0.77
SMPD1-201ENST00000342245 UMODL1Q5DID0 1318 aa19.85■□□□□ 0.77
SMPD1-201ENST00000342245 PLCH1Q4KWH8 1693 aa19.85■□□□□ 0.77
SMPD1-201ENST00000342245 M0R2N6 131 aa19.84■□□□□ 0.77
SMPD1-201ENST00000342245 ATP9BO43861 1147 aa19.84■□□□□ 0.77
SMPD1-201ENST00000342245 RRP1BQ14684 758 aaKnown RBP19.84■□□□□ 0.77
SMPD1-201ENST00000342245 LDHAL6AQ6ZMR3 332 aa19.84■□□□□ 0.77
SMPD1-201ENST00000342245 LCORLQ8N3X6 602 aa19.84■□□□□ 0.77
SMPD1-201ENST00000342245 ZBTB8BQ8NAP8 495 aaPredicted RBP19.84■□□□□ 0.77
SMPD1-201ENST00000342245 ZNF398Q8TD17 642 aa19.84■□□□□ 0.77
SMPD1-201ENST00000342245 NRG4Q8WWG1 115 aa19.84■□□□□ 0.77
SMPD1-201ENST00000342245 CATSPER2Q96P56 530 aa19.84■□□□□ 0.77
SMPD1-201ENST00000342245 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.84■□□□□ 0.77
SMPD1-201ENST00000342245 LGALS13Q9UHV8 139 aa19.84■□□□□ 0.77
SMPD1-201ENST00000342245 SMIM31A0A1B0GVY4 71 aa19.84■□□□□ 0.77
SMPD1-201ENST00000342245 A8MXQ7 604 aa19.84■□□□□ 0.77
SMPD1-201ENST00000342245 HGSO14964 777 aaPredicted RBP19.84■□□□□ 0.77
SMPD1-201ENST00000342245 KRT13P13646 458 aa19.84■□□□□ 0.77
SMPD1-201ENST00000342245 MPP3Q13368 585 aa19.84■□□□□ 0.77
SMPD1-201ENST00000342245 ORC2Q13416 577 aaPredicted RBP19.84■□□□□ 0.77
SMPD1-201ENST00000342245 PRPF4BQ13523 1007 aaKnown RBP19.84■□□□□ 0.77
SMPD1-201ENST00000342245 ITGA9Q13797 1035 aa19.84■□□□□ 0.77
SMPD1-201ENST00000342245 LONRF1Q17RB8 773 aa19.84■□□□□ 0.77
SMPD1-201ENST00000342245 ZCWPW2Q504Y3 356 aa19.84■□□□□ 0.77
SMPD1-201ENST00000342245 OTUD6AQ7L8S5 288 aa19.84■□□□□ 0.77
SMPD1-201ENST00000342245 UHMK1Q8TAS1 419 aaKnown RBP19.84■□□□□ 0.77
SMPD1-201ENST00000342245 C7orf43Q8WVR3 580 aa19.84■□□□□ 0.77
SMPD1-201ENST00000342245 HPS3Q969F9 1004 aa19.84■□□□□ 0.77
SMPD1-201ENST00000342245 CCDC97Q96F63 343 aaPredicted RBP19.84■□□□□ 0.77
SMPD1-201ENST00000342245 NR2E1Q9Y466 385 aa19.84■□□□□ 0.77
SMPD1-201ENST00000342245 DUOX1Q9NRD9 1551 aa19.84■□□□□ 0.77
SMPD1-201ENST00000342245 TRAF5O00463 557 aa19.83■□□□□ 0.77
SMPD1-201ENST00000342245 DDX3XO00571 662 aaKnown RBP eCLIP19.83■□□□□ 0.771e-11■■■■■ 63
SMPD1-201ENST00000342245 CYP1A1P04798 512 aaPredicted RBP19.83■□□□□ 0.77
SMPD1-201ENST00000342245 SMYD1Q8NB12 490 aa19.83■□□□□ 0.77
SMPD1-201ENST00000342245 DCAF5Q96JK2 942 aa19.83■□□□□ 0.77
SMPD1-201ENST00000342245 ISCA1Q9BUE6 129 aa19.83■□□□□ 0.77
SMPD1-201ENST00000342245 FAM205AQ6ZU69 1335 aa19.83■□□□□ 0.76
SMPD1-201ENST00000342245 RBM47A0AV96 593 aaKnown RBP19.83■□□□□ 0.76
SMPD1-201ENST00000342245 ALAS1P13196 640 aa19.83■□□□□ 0.76
SMPD1-201ENST00000342245 PHKA1P46020 1223 aa19.83■□□□□ 0.76
SMPD1-201ENST00000342245 NAT14Q8WUY8 206 aa19.83■□□□□ 0.76
SMPD1-201ENST00000342245 SMC6Q96SB8 1091 aa19.83■□□□□ 0.76
SMPD1-201ENST00000342245 EPB41L1Q9H4G0 881 aa19.83■□□□□ 0.76
SMPD1-201ENST00000342245 PAIP2BQ9ULR5 123 aaKnown RBP19.83■□□□□ 0.76
SMPD1-201ENST00000342245 PDE8BO95263 885 aa19.82■□□□□ 0.76
SMPD1-201ENST00000342245 ITGA2BP08514 1039 aa19.82■□□□□ 0.76
SMPD1-201ENST00000342245 CALCOCO2Q13137 446 aa19.82■□□□□ 0.76
SMPD1-201ENST00000342245 ZNF449Q6P9G9 518 aa19.82■□□□□ 0.76
SMPD1-201ENST00000342245 VGLL2Q8N8G2 317 aa19.82■□□□□ 0.76
SMPD1-201ENST00000342245 RFFLQ8WZ73 363 aa19.82■□□□□ 0.76
SMPD1-201ENST00000342245 YIPF2Q9BWQ6 316 aa19.82■□□□□ 0.76
SMPD1-201ENST00000342245 PHTF1Q9UMS5 762 aa19.82■□□□□ 0.76
SMPD1-201ENST00000342245 PCDHA3Q9Y5H8 950 aa19.82■□□□□ 0.76
SMPD1-201ENST00000342245 NBPF26B4DH59 902 aa19.82■□□□□ 0.76
SMPD1-201ENST00000342245 EIF4BP23588 611 aaKnown RBP19.82■□□□□ 0.76
SMPD1-201ENST00000342245 CABP4P57796 275 aa19.82■□□□□ 0.76
SMPD1-201ENST00000342245 RTP1P59025 263 aa19.82■□□□□ 0.76
SMPD1-201ENST00000342245 TRIM28Q13263 835 aaKnown RBP19.82■□□□□ 0.76
SMPD1-201ENST00000342245 PTPROQ16827 1216 aa19.82■□□□□ 0.76
SMPD1-201ENST00000342245 SLC4A8Q2Y0W8 1093 aa19.82■□□□□ 0.76
SMPD1-201ENST00000342245 BTBD10Q9BSF8 475 aa19.82■□□□□ 0.76
SMPD1-201ENST00000342245 PCDH18Q9HCL0 1135 aa19.82■□□□□ 0.76
SMPD1-201ENST00000342245 ERVK-5Q9HDB9 667 aa19.82■□□□□ 0.76
SMPD1-201ENST00000342245 CNNM1Q9NRU3 951 aa19.82■□□□□ 0.76
SMPD1-201ENST00000342245 ZFP69BQ9UJL9 534 aa19.82■□□□□ 0.76
SMPD1-201ENST00000342245 ARAP2Q8WZ64 1704 aa19.82■□□□□ 0.76
SMPD1-201ENST00000342245 MYMKA6NI61 221 aa19.81■□□□□ 0.76
SMPD1-201ENST00000342245 MINDY4BA8MYZ0 360 aa19.81■□□□□ 0.76
SMPD1-201ENST00000342245 GH1P01241 217 aa19.81■□□□□ 0.76
SMPD1-201ENST00000342245 VIL1P09327 827 aaKnown RBP19.81■□□□□ 0.76
SMPD1-201ENST00000342245 CTNNA2P26232 953 aa19.81■□□□□ 0.76
SMPD1-201ENST00000342245 SLC18A1P54219 525 aa19.81■□□□□ 0.76
SMPD1-201ENST00000342245 NR1H3Q13133 447 aa19.81■□□□□ 0.76
SMPD1-201ENST00000342245 ARHGAP24Q8N264 748 aa19.81■□□□□ 0.76
SMPD1-201ENST00000342245 GFM2Q969S9 779 aaKnown RBP19.81■□□□□ 0.76
SMPD1-201ENST00000342245 UTP3Q9NQZ2 479 aaKnown RBP eCLIP19.81■□□□□ 0.76
SMPD1-201ENST00000342245 ITGB1BP2Q9UKP3 347 aa19.81■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms