RNA–Protein interactions for RNA: ENST00000341316.6

SPG7-202, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 1 (best) BASIC

Gene SPG7, Length 2,288 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-202ENST00000341316 VSIG10LQ86VR7 867 aa21.78■■□□□ 1.08
SPG7-202ENST00000341316 SCYL3Q8IZE3 742 aa21.78■■□□□ 1.08
SPG7-202ENST00000341316 SCFD2Q8WU76 684 aa21.78■■□□□ 1.08
SPG7-202ENST00000341316 IFT81Q8WYA0 676 aa21.78■■□□□ 1.08
SPG7-202ENST00000341316 KAT5Q92993 513 aa21.78■■□□□ 1.08
SPG7-202ENST00000341316 CAPS2Q9BXY5 557 aa21.78■■□□□ 1.08
SPG7-202ENST00000341316 UTP3Q9NQZ2 479 aaKnown RBP eCLIP21.78■■□□□ 1.081e-7■■■■■ 109.8
SPG7-202ENST00000341316 NCANO14594 1321 aa21.78■■□□□ 1.08
SPG7-202ENST00000341316 PARP14Q460N5 1801 aa21.77■■□□□ 1.08
SPG7-202ENST00000341316 OPA1O60313 960 aa21.77■■□□□ 1.08
SPG7-202ENST00000341316 ZNF280CQ8ND82 737 aa21.77■■□□□ 1.08
SPG7-202ENST00000341316 ARL8AQ96BM9 186 aa21.77■■□□□ 1.08
SPG7-202ENST00000341316 WRNIP1Q96S55 665 aa21.77■■□□□ 1.08
SPG7-202ENST00000341316 AP1M1Q9BXS5 423 aa21.77■■□□□ 1.08
SPG7-202ENST00000341316 ANKEF1Q9NU02 776 aa21.77■■□□□ 1.08
SPG7-202ENST00000341316 SUCLA2Q9P2R7 463 aaPredicted RBP21.77■■□□□ 1.08
SPG7-202ENST00000341316 ZNF862O60290 1169 aa21.77■■□□□ 1.08
SPG7-202ENST00000341316 RGS20O76081 388 aa21.77■■□□□ 1.08
SPG7-202ENST00000341316 NR3C2P08235 984 aa21.77■■□□□ 1.08
SPG7-202ENST00000341316 TNFAIP3P21580 790 aa21.77■■□□□ 1.08
SPG7-202ENST00000341316 SFNP31947 248 aa21.77■■□□□ 1.08
SPG7-202ENST00000341316 HMGCS2P54868 508 aa21.77■■□□□ 1.08
SPG7-202ENST00000341316 TTMPQ5BVD1 217 aa21.77■■□□□ 1.08
SPG7-202ENST00000341316 SNRNP48Q6IEG0 339 aaKnown RBP21.77■■□□□ 1.08
SPG7-202ENST00000341316 CBWD2Q8IUF1 395 aa21.77■■□□□ 1.08
SPG7-202ENST00000341316 PROCA1Q8NCQ7 364 aaPredicted RBP21.77■■□□□ 1.08
SPG7-202ENST00000341316 TMEM161BQ8NDZ6 487 aa21.77■■□□□ 1.08
SPG7-202ENST00000341316 LMBR1Q8WVP7 490 aa21.77■■□□□ 1.08
SPG7-202ENST00000341316 BSNDQ8WZ55 320 aa21.77■■□□□ 1.08
SPG7-202ENST00000341316 MOV10L1Q9BXT6 1211 aaKnown RBP21.77■■□□□ 1.08
SPG7-202ENST00000341316 TMEM117Q9H0C3 514 aa21.77■■□□□ 1.08
SPG7-202ENST00000341316 THAP2Q9H0W7 228 aa21.77■■□□□ 1.08
SPG7-202ENST00000341316 SEPT11Q9NVA2 429 aaKnown RBP21.77■■□□□ 1.08
SPG7-202ENST00000341316 TCEAL9Q9UHQ7 104 aa21.77■■□□□ 1.08
SPG7-202ENST00000341316 ZNF112Q9UJU3 913 aa21.77■■□□□ 1.08
SPG7-202ENST00000341316 HSF2BPO75031 334 aa21.76■■□□□ 1.07
SPG7-202ENST00000341316 NPTX2P47972 431 aa21.76■■□□□ 1.07
SPG7-202ENST00000341316 ALS2CLQ60I27 953 aa21.76■■□□□ 1.07
SPG7-202ENST00000341316 RFFLQ8WZ73 363 aa21.76■■□□□ 1.07
SPG7-202ENST00000341316 HES6Q96HZ4 224 aa21.76■■□□□ 1.07
SPG7-202ENST00000341316 RUFY1Q96T51 708 aa21.76■■□□□ 1.07
SPG7-202ENST00000341316 TIPINQ9BVW5 301 aa21.76■■□□□ 1.07
SPG7-202ENST00000341316 TBX20Q9UMR3 447 aa21.76■■□□□ 1.07
SPG7-202ENST00000341316 NOC2LQ9Y3T9 749 aaKnown RBP21.76■■□□□ 1.07
SPG7-202ENST00000341316 CCDC169A6NNP5 214 aa21.76■■□□□ 1.07
SPG7-202ENST00000341316 CCT5P48643 541 aa21.76■■□□□ 1.07
SPG7-202ENST00000341316 GNGT1P63211 74 aa21.76■■□□□ 1.07
SPG7-202ENST00000341316 PPATQ06203 517 aa21.76■■□□□ 1.07
SPG7-202ENST00000341316 SAAL1Q96ER3 474 aa21.76■■□□□ 1.07
SPG7-202ENST00000341316 AGPAT1Q99943 283 aa21.76■■□□□ 1.07
SPG7-202ENST00000341316 RABEP2Q9H5N1 569 aa21.76■■□□□ 1.07
SPG7-202ENST00000341316 ZNF214Q9UL59 606 aaPredicted RBP21.76■■□□□ 1.07
SPG7-202ENST00000341316 COG5Q9UP83 839 aa21.76■■□□□ 1.07
SPG7-202ENST00000341316 GRIN2DO15399 1336 aa21.76■■□□□ 1.07
SPG7-202ENST00000341316 STBD1O95210 358 aa21.75■■□□□ 1.07
SPG7-202ENST00000341316 RFX1P22670 979 aa21.75■■□□□ 1.07
SPG7-202ENST00000341316 CCND2P30279 289 aa21.75■■□□□ 1.07
SPG7-202ENST00000341316 TNNC1P63316 161 aa21.75■■□□□ 1.07
SPG7-202ENST00000341316 TTC19Q6DKK2 380 aaPredicted RBP21.75■■□□□ 1.07
SPG7-202ENST00000341316 NLRX1Q86UT6 975 aa21.75■■□□□ 1.07
SPG7-202ENST00000341316 SYCE1Q8N0S2 351 aa21.75■■□□□ 1.07
SPG7-202ENST00000341316 BUD13Q9BRD0 619 aaKnown RBP eCLIP21.75■■□□□ 1.074e-8■■□□□ 12.2
SPG7-202ENST00000341316 GABBR1Q9UBS5 961 aa21.75■■□□□ 1.07
SPG7-202ENST00000341316 PCDHA10Q9Y5I2 948 aa21.75■■□□□ 1.07
SPG7-202ENST00000341316 BRCA1P38398 1863 aaKnown RBP21.75■■□□□ 1.07
SPG7-202ENST00000341316 DOCK1Q14185 1865 aa21.75■■□□□ 1.07
SPG7-202ENST00000341316 RLFQ13129 1914 aa21.75■■□□□ 1.07
SPG7-202ENST00000341316 CCDC172P0C7W6 258 aa21.75■■□□□ 1.07
SPG7-202ENST00000341316 ITGA4P13612 1032 aa21.75■■□□□ 1.07
SPG7-202ENST00000341316 KCNA2P16389 499 aa21.75■■□□□ 1.07
SPG7-202ENST00000341316 TMEM132BQ14DG7 1078 aa21.75■■□□□ 1.07
SPG7-202ENST00000341316 ZNF746Q6NUN9 644 aaPredicted RBP21.75■■□□□ 1.07
SPG7-202ENST00000341316 PACS2Q86VP3 889 aa21.75■■□□□ 1.07
SPG7-202ENST00000341316 RASGEF1CQ8N431 466 aa21.75■■□□□ 1.07
SPG7-202ENST00000341316 CTNNBL1Q8WYA6 563 aaPredicted RBP21.75■■□□□ 1.07
SPG7-202ENST00000341316 ZIM3Q96PE6 472 aa21.75■■□□□ 1.07
SPG7-202ENST00000341316 DAAM1Q9Y4D1 1078 aa21.75■■□□□ 1.07
SPG7-202ENST00000341316 PFASO15067 1338 aa21.74■■□□□ 1.07
SPG7-202ENST00000341316 FZD9O00144 591 aa21.74■■□□□ 1.07
SPG7-202ENST00000341316 PGRMC1O00264 195 aaKnown RBP21.74■■□□□ 1.07
SPG7-202ENST00000341316 TULP1O00294 542 aaPredicted RBP21.74■■□□□ 1.07
SPG7-202ENST00000341316 MAPK13O15264 365 aa21.74■■□□□ 1.07
SPG7-202ENST00000341316 EIF3HO15372 352 aaKnown RBP eCLIP21.74■■□□□ 1.075e-6■■■□□ 14.9
SPG7-202ENST00000341316 P4HA2O15460 535 aa21.74■■□□□ 1.07
SPG7-202ENST00000341316 FDX1P10109 184 aa21.74■■□□□ 1.07
SPG7-202ENST00000341316 ANGEL2Q5VTE6 544 aaKnown RBP21.74■■□□□ 1.07
SPG7-202ENST00000341316 DCAF15Q66K64 600 aa21.74■■□□□ 1.07
SPG7-202ENST00000341316 SEMA4DQ92854 862 aa21.74■■□□□ 1.07
SPG7-202ENST00000341316 GPRASP2Q96D09 838 aa21.74■■□□□ 1.07
SPG7-202ENST00000341316 POP1Q99575 1024 aaKnown RBP21.74■■□□□ 1.07
SPG7-202ENST00000341316 PNMA2Q9UL42 364 aa21.74■■□□□ 1.07
SPG7-202ENST00000341316 ADAMTS5Q9UNA0 930 aa21.74■■□□□ 1.07
SPG7-202ENST00000341316 COL11A1P12107 1806 aaPredicted RBP21.73■■□□□ 1.07
SPG7-202ENST00000341316 SORBS3O60504 671 aa21.73■■□□□ 1.07
SPG7-202ENST00000341316 DSG3P32926 999 aa21.73■■□□□ 1.07
SPG7-202ENST00000341316 MXI1P50539 228 aa21.73■■□□□ 1.07
SPG7-202ENST00000341316 ERVK-9P63128 1117 aa21.73■■□□□ 1.07
SPG7-202ENST00000341316 MAP2K1Q02750 393 aaPredicted RBP21.73■■□□□ 1.07
SPG7-202ENST00000341316 SNRNP35Q16560 246 aaKnown RBP21.73■■□□□ 1.07
SPG7-202ENST00000341316 TTC31Q49AM3 519 aaPredicted RBP21.73■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms