RNA–Protein interactions for RNA: ENST00000340541.4

VAPA-201, Transcript of VAMP associated protein A, humanhuman

TSL 5 BASIC

Gene VAPA, Length 1,227 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-201ENST00000340541 POP1Q99575 1024 aaKnown RBP17.06■□□□□ 0.32
VAPA-201ENST00000340541 ZSCAN16Q9H4T2 348 aaPredicted RBP17.06■□□□□ 0.32
VAPA-201ENST00000340541 DNM3Q9UQ16 869 aa17.06■□□□□ 0.32
VAPA-201ENST00000340541 MYO7AQ13402 2215 aa17.05■□□□□ 0.32
VAPA-201ENST00000340541 TSPAN1O60635 241 aa17.05■□□□□ 0.32
VAPA-201ENST00000340541 LONP1P36776 959 aaKnown RBP17.05■□□□□ 0.32
VAPA-201ENST00000340541 ZP2Q05996 745 aa17.05■□□□□ 0.32
VAPA-201ENST00000340541 CAMK1Q14012 370 aa17.05■□□□□ 0.32
VAPA-201ENST00000340541 PCBP1Q15365 356 aaKnown RBP eCLIP17.05■□□□□ 0.32
VAPA-201ENST00000340541 CLLU1OSQ5K130 101 aa17.05■□□□□ 0.32
VAPA-201ENST00000340541 CDCA2Q69YH5 1023 aaPredicted RBP17.05■□□□□ 0.32
VAPA-201ENST00000340541 TWF2Q6IBS0 349 aaKnown RBP17.05■□□□□ 0.32
VAPA-201ENST00000340541 KCTD17Q8N5Z5 321 aa17.05■□□□□ 0.32
VAPA-201ENST00000340541 CASD1Q96PB1 797 aa17.05■□□□□ 0.32
VAPA-201ENST00000340541 PLIN2Q99541 437 aa17.05■□□□□ 0.32
VAPA-201ENST00000340541 RUSC1Q9BVN2 902 aa17.05■□□□□ 0.32
VAPA-201ENST00000340541 POLD4Q9HCU8 107 aa17.05■□□□□ 0.32
VAPA-201ENST00000340541 ALG13Q9NP73 1137 aaKnown RBP17.05■□□□□ 0.32
VAPA-201ENST00000340541 HCSTQ9UBK5 93 aa17.05■□□□□ 0.32
VAPA-201ENST00000340541 FBXO2Q9UK22 296 aaPredicted RBP17.05■□□□□ 0.32
VAPA-201ENST00000340541 ATG2AQ2TAZ0 1938 aa17.05■□□□□ 0.32
VAPA-201ENST00000340541 TBKBP1A7MCY6 615 aa17.04■□□□□ 0.32
VAPA-201ENST00000340541 INO80B-WBP1J3KQ70 363 aa17.04■□□□□ 0.32
VAPA-201ENST00000340541 SLC26A4O43511 780 aa17.04■□□□□ 0.32
VAPA-201ENST00000340541 DCXO43602 365 aa17.04■□□□□ 0.32
VAPA-201ENST00000340541 ZNF623O75123 536 aa17.04■□□□□ 0.32
VAPA-201ENST00000340541 EOMESO95936 686 aa17.04■□□□□ 0.32
VAPA-201ENST00000340541 ITGB1P05556 798 aa17.04■□□□□ 0.32
VAPA-201ENST00000340541 HSP90AA1P07900 732 aaKnown RBP17.04■□□□□ 0.32
VAPA-201ENST00000340541 CEBPZQ03701 1054 aaKnown RBP17.04■□□□□ 0.32
VAPA-201ENST00000340541 UBE3AQ05086 875 aa17.04■□□□□ 0.32
VAPA-201ENST00000340541 PKP1Q13835 747 aa17.04■□□□□ 0.32
VAPA-201ENST00000340541 ZRSR1Q15695 479 aaKnown RBP17.04■□□□□ 0.32
VAPA-201ENST00000340541 RINT1Q6NUQ1 792 aa17.04■□□□□ 0.32
VAPA-201ENST00000340541 LRRC55Q6ZSA7 311 aa17.04■□□□□ 0.32
VAPA-201ENST00000340541 C1orf186Q6ZWK4 172 aa17.04■□□□□ 0.32
VAPA-201ENST00000340541 CABP7Q86V35 215 aa17.04■□□□□ 0.32
VAPA-201ENST00000340541 DAW1Q8N136 415 aa17.04■□□□□ 0.32
VAPA-201ENST00000340541 SPRYD3Q8NCJ5 442 aa17.04■□□□□ 0.32
VAPA-201ENST00000340541 TMEM117Q9H0C3 514 aa17.04■□□□□ 0.32
VAPA-201ENST00000340541 NT5C3AQ9H0P0 336 aa17.04■□□□□ 0.32
VAPA-201ENST00000340541 AAASQ9NRG9 546 aa17.04■□□□□ 0.32
VAPA-201ENST00000340541 FAM105AQ9NUU6 356 aa17.04■□□□□ 0.32
VAPA-201ENST00000340541 MORC2Q9Y6X9 1032 aaPredicted RBP17.04■□□□□ 0.32
VAPA-201ENST00000340541 FSD2A1L4K1 749 aa17.03■□□□□ 0.32
VAPA-201ENST00000340541 LRRIQ4A6NIV6 560 aa17.03■□□□□ 0.32
VAPA-201ENST00000340541 MEIS3P2A8K0S8 358 aa17.03■□□□□ 0.32
VAPA-201ENST00000340541 B4GALT5O43286 388 aa17.03■□□□□ 0.32
VAPA-201ENST00000340541 MBTPS2O43462 519 aa17.03■□□□□ 0.32
VAPA-201ENST00000340541 MARCKSP29966 332 aaPredicted RBP17.03■□□□□ 0.32
VAPA-201ENST00000340541 NASPP49321 788 aaPredicted RBP17.03■□□□□ 0.32
VAPA-201ENST00000340541 SLC12A3P55017 1021 aa17.03■□□□□ 0.32
VAPA-201ENST00000340541 MAPK7Q13164 816 aa17.03■□□□□ 0.32
VAPA-201ENST00000340541 SMAD4Q13485 552 aaKnown RBP17.03■□□□□ 0.32
VAPA-201ENST00000340541 SLC39A14Q15043 492 aa17.03■□□□□ 0.32
VAPA-201ENST00000340541 CSPP1Q1MSJ5 1256 aa17.03■□□□□ 0.32
VAPA-201ENST00000340541 USP49Q70CQ1 688 aa17.03■□□□□ 0.32
VAPA-201ENST00000340541 EFHBQ8N7U6 833 aa17.03■□□□□ 0.32
VAPA-201ENST00000340541 SYT2Q8N9I0 419 aaPredicted RBP17.03■□□□□ 0.32
VAPA-201ENST00000340541 KLHL23Q8NBE8 558 aa17.03■□□□□ 0.32
VAPA-201ENST00000340541 RNF169Q8NCN4 708 aa17.03■□□□□ 0.32
VAPA-201ENST00000340541 LPPQ93052 612 aa17.03■□□□□ 0.32
VAPA-201ENST00000340541 CSRNP2Q9H175 543 aa17.03■□□□□ 0.32
VAPA-201ENST00000340541 CWH43Q9H720 699 aa17.03■□□□□ 0.32
VAPA-201ENST00000340541 CD207Q9UJ71 328 aa17.03■□□□□ 0.32
VAPA-201ENST00000340541 PCDHB12Q9Y5F1 795 aa17.03■□□□□ 0.32
VAPA-201ENST00000340541 SRPRBQ9Y5M8 271 aaKnown RBP17.03■□□□□ 0.32
VAPA-201ENST00000340541 FAM86C2PA6NEL3 165 aa17.02■□□□□ 0.32
VAPA-201ENST00000340541 HOXA2O43364 376 aa17.02■□□□□ 0.32
VAPA-201ENST00000340541 ERLIN2O94905 339 aa17.02■□□□□ 0.32
VAPA-201ENST00000340541 ZSCAN22P10073 491 aaPredicted RBP17.02■□□□□ 0.32
VAPA-201ENST00000340541 PDIA4P13667 645 aaKnown RBP17.02■□□□□ 0.32
VAPA-201ENST00000340541 ARF4P18085 180 aaPredicted RBP17.02■□□□□ 0.32
VAPA-201ENST00000340541 AXLP30530 894 aa17.02■□□□□ 0.32
VAPA-201ENST00000340541 UBA7P41226 1012 aa17.02■□□□□ 0.32
VAPA-201ENST00000340541 NAMPTP43490 491 aa17.02■□□□□ 0.32
VAPA-201ENST00000340541 RAB27AP51159 221 aa17.02■□□□□ 0.32
VAPA-201ENST00000340541 PDE12Q6L8Q7 609 aaKnown RBP17.02■□□□□ 0.32
VAPA-201ENST00000340541 MRPL10Q7Z7H8 261 aaKnown RBP17.02■□□□□ 0.32
VAPA-201ENST00000340541 POF1BQ8WVV4 589 aa17.02■□□□□ 0.32
VAPA-201ENST00000340541 KIFAP3Q92845 792 aa17.02■□□□□ 0.32
VAPA-201ENST00000340541 CPB2Q96IY4 423 aa17.02■□□□□ 0.32
VAPA-201ENST00000340541 CLIC6Q96NY7 704 aa17.02■□□□□ 0.32
VAPA-201ENST00000340541 CCSER1Q9C0I3 900 aa17.02■□□□□ 0.32
VAPA-201ENST00000340541 CCDC113Q9H0I3 377 aa17.02■□□□□ 0.32
VAPA-201ENST00000340541 KCNH6Q9H252 994 aa17.02■□□□□ 0.32
VAPA-201ENST00000340541 FZD8Q9H461 694 aa17.02■□□□□ 0.32
VAPA-201ENST00000340541 BLOC1S4Q9NUP1 217 aa17.02■□□□□ 0.32
VAPA-201ENST00000340541 TYW1Q9NV66 732 aaKnown RBP17.02■□□□□ 0.32
VAPA-201ENST00000340541 PCDHB2Q9Y5E7 798 aa17.02■□□□□ 0.32
VAPA-201ENST00000340541 PLXNA4Q9HCM2 1894 aa17.01■□□□□ 0.31
VAPA-201ENST00000340541 TTLL13PA6NNM8 815 aa17.01■□□□□ 0.31
VAPA-201ENST00000340541 HIP1RO75146 1068 aa17.01■□□□□ 0.31
VAPA-201ENST00000340541 F13A1P00488 732 aa17.01■□□□□ 0.31
VAPA-201ENST00000340541 EDN1P05305 212 aa17.01■□□□□ 0.31
VAPA-201ENST00000340541 PLA2G4BP0C869 781 aa17.01■□□□□ 0.31
VAPA-201ENST00000340541 SKIP12755 728 aa17.01■□□□□ 0.31
VAPA-201ENST00000340541 GUCY2CP25092 1073 aa17.01■□□□□ 0.31
VAPA-201ENST00000340541 DNAJB1P25685 340 aa17.01■□□□□ 0.31
VAPA-201ENST00000340541 DLX2Q07687 328 aaPredicted RBP17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms