RNA–Protein interactions for RNA: ENST00000340477.9

SYNE4-202, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNE4, Length 1,004 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-202ENST00000340477 GLB1LQ6UWU2 654 aa21.18■□□□□ 0.98
SYNE4-202ENST00000340477 PPP4R3CPQ6ZMV5 832 aa21.18■□□□□ 0.98
SYNE4-202ENST00000340477 CCDC73Q6ZRK6 1079 aa21.18■□□□□ 0.98
SYNE4-202ENST00000340477 SPRED2Q7Z698 418 aa21.18■□□□□ 0.98
SYNE4-202ENST00000340477 GPBP1Q86WP2 473 aa21.18■□□□□ 0.98
SYNE4-202ENST00000340477 BSNDQ8WZ55 320 aa21.18■□□□□ 0.98
SYNE4-202ENST00000340477 RAD54LQ92698 747 aa21.18■□□□□ 0.98
SYNE4-202ENST00000340477 CPB2Q96IY4 423 aa21.18■□□□□ 0.98
SYNE4-202ENST00000340477 PLVAPQ9BX97 442 aa21.18■□□□□ 0.98
SYNE4-202ENST00000340477 RFXAPO00287 272 aa21.17■□□□□ 0.98
SYNE4-202ENST00000340477 ZNF623O75123 536 aa21.17■□□□□ 0.98
SYNE4-202ENST00000340477 RAD51AP2Q09MP3 1159 aa21.17■□□□□ 0.98
SYNE4-202ENST00000340477 GPM6BQ13491 265 aa21.17■□□□□ 0.98
SYNE4-202ENST00000340477 PRPF4BQ13523 1007 aaKnown RBP21.17■□□□□ 0.98
SYNE4-202ENST00000340477 FAM187BQ17R55 369 aa21.17■□□□□ 0.98
SYNE4-202ENST00000340477 CSPP1Q1MSJ5 1256 aa21.17■□□□□ 0.98
SYNE4-202ENST00000340477 APBB1IPQ7Z5R6 666 aaPredicted RBP21.17■□□□□ 0.98
SYNE4-202ENST00000340477 ZNF598Q86UK7 904 aaKnown RBP21.17■□□□□ 0.98
SYNE4-202ENST00000340477 MICALL1Q8N3F8 863 aa21.17■□□□□ 0.98
SYNE4-202ENST00000340477 HELQQ8TDG4 1101 aa21.17■□□□□ 0.98
SYNE4-202ENST00000340477 UBN1Q9NPG3 1134 aa21.17■□□□□ 0.98
SYNE4-202ENST00000340477 KMT5AQ9NQR1 393 aa21.17■□□□□ 0.98
SYNE4-202ENST00000340477 ODF2LQ9ULJ1 636 aa21.17■□□□□ 0.98
SYNE4-202ENST00000340477 RBM19Q9Y4C8 960 aaKnown RBP21.17■□□□□ 0.98
SYNE4-202ENST00000340477 PCDHB12Q9Y5F1 795 aa21.17■□□□□ 0.98
SYNE4-202ENST00000340477 CNTNAP2Q9UHC6 1331 aa21.17■□□□□ 0.98
SYNE4-202ENST00000340477 H0YCG3 227 aa21.16■□□□□ 0.98
SYNE4-202ENST00000340477 N4BP3O15049 544 aa21.16■□□□□ 0.98
SYNE4-202ENST00000340477 CUTAO60888 179 aa21.16■□□□□ 0.98
SYNE4-202ENST00000340477 TBCAO75347 108 aaKnown RBP21.16■□□□□ 0.98
SYNE4-202ENST00000340477 BRD1O95696 1058 aa21.16■□□□□ 0.98
SYNE4-202ENST00000340477 ARF4P18085 180 aaPredicted RBP21.16■□□□□ 0.98
SYNE4-202ENST00000340477 LAG3P18627 525 aa21.16■□□□□ 0.98
SYNE4-202ENST00000340477 NCLP19338 710 aaKnown RBP21.16■□□□□ 0.98
SYNE4-202ENST00000340477 HOXA11P31270 313 aaPredicted RBP21.16■□□□□ 0.98
SYNE4-202ENST00000340477 STAT6P42226 847 aa21.16■□□□□ 0.98
SYNE4-202ENST00000340477 ADGRE1Q14246 886 aa21.16■□□□□ 0.98
SYNE4-202ENST00000340477 NAALADL2Q58DX5 795 aa21.16■□□□□ 0.98
SYNE4-202ENST00000340477 SLC27A1Q6PCB7 646 aa21.16■□□□□ 0.98
SYNE4-202ENST00000340477 URGCPQ8TCY9 931 aa21.16■□□□□ 0.98
SYNE4-202ENST00000340477 ADPGKQ9BRR6 497 aa21.16■□□□□ 0.98
SYNE4-202ENST00000340477 FZD8Q9H461 694 aa21.16■□□□□ 0.98
SYNE4-202ENST00000340477 POLD4Q9HCU8 107 aa21.16■□□□□ 0.98
SYNE4-202ENST00000340477 LMCD1Q9NZU5 365 aa21.16■□□□□ 0.98
SYNE4-202ENST00000340477 LARSQ9P2J5 1176 aaKnown RBP21.16■□□□□ 0.98
SYNE4-202ENST00000340477 CHD7Q9P2D1 2997 aa21.15■□□□□ 0.98
SYNE4-202ENST00000340477 C5orf67F2Z3F1 127 aa21.15■□□□□ 0.98
SYNE4-202ENST00000340477 H3BNC9 293 aa21.15■□□□□ 0.98
SYNE4-202ENST00000340477 K7ERI5 159 aa21.15■□□□□ 0.98
SYNE4-202ENST00000340477 ACKR2O00590 384 aa21.15■□□□□ 0.98
SYNE4-202ENST00000340477 FAM13AO94988 1023 aa21.15■□□□□ 0.98
SYNE4-202ENST00000340477 ITGA4P13612 1032 aa21.15■□□□□ 0.98
SYNE4-202ENST00000340477 PLS3P13797 630 aa21.15■□□□□ 0.98
SYNE4-202ENST00000340477 ATF7P17544 494 aaPredicted RBP21.15■□□□□ 0.98
SYNE4-202ENST00000340477 DDIT3P35638 169 aa21.15■□□□□ 0.98
SYNE4-202ENST00000340477 NPTX2P47972 431 aa21.15■□□□□ 0.98
SYNE4-202ENST00000340477 ME1P48163 572 aa21.15■□□□□ 0.98
SYNE4-202ENST00000340477 KRT85P78386 507 aa21.15■□□□□ 0.98
SYNE4-202ENST00000340477 MCM6Q14566 821 aa21.15■□□□□ 0.98
SYNE4-202ENST00000340477 AMHR2Q16671 573 aa21.15■□□□□ 0.98
SYNE4-202ENST00000340477 CLLU1OSQ5K130 101 aa21.15■□□□□ 0.98
SYNE4-202ENST00000340477 USP49Q70CQ1 688 aa21.15■□□□□ 0.98
SYNE4-202ENST00000340477 CASD1Q96PB1 797 aa21.15■□□□□ 0.98
SYNE4-202ENST00000340477 KIFC3Q9BVG8 833 aa21.15■□□□□ 0.98
SYNE4-202ENST00000340477 BLOC1S4Q9NUP1 217 aa21.15■□□□□ 0.98
SYNE4-202ENST00000340477 INPP5FQ9Y2H2 1132 aa21.15■□□□□ 0.98
SYNE4-202ENST00000340477 CARNS1A5YM72 827 aa21.14■□□□□ 0.97
SYNE4-202ENST00000340477 B4GALT5O43286 388 aa21.14■□□□□ 0.97
SYNE4-202ENST00000340477 POU3F3P20264 500 aaPredicted RBP21.14■□□□□ 0.97
SYNE4-202ENST00000340477 DNM1Q05193 864 aaKnown RBP21.14■□□□□ 0.97
SYNE4-202ENST00000340477 LONRF3Q496Y0 759 aa21.14■□□□□ 0.97
SYNE4-202ENST00000340477 UBXN11Q5T124 520 aa21.14■□□□□ 0.97
SYNE4-202ENST00000340477 DAW1Q8N136 415 aa21.14■□□□□ 0.97
SYNE4-202ENST00000340477 PPM1EQ8WY54 764 aa21.14■□□□□ 0.97
SYNE4-202ENST00000340477 LPPQ93052 612 aa21.14■□□□□ 0.97
SYNE4-202ENST00000340477 P2RX5Q93086 422 aa21.14■□□□□ 0.97
SYNE4-202ENST00000340477 CCDC113Q9H0I3 377 aa21.14■□□□□ 0.97
SYNE4-202ENST00000340477 LMAN2LQ9H0V9 348 aa21.14■□□□□ 0.97
SYNE4-202ENST00000340477 RSAD1Q9HA92 442 aa21.14■□□□□ 0.97
SYNE4-202ENST00000340477 TYW1Q9NV66 732 aaKnown RBP21.14■□□□□ 0.97
SYNE4-202ENST00000340477 MTCH2Q9Y6C9 303 aa21.14■□□□□ 0.97
SYNE4-202ENST00000340477 A0A1B0GUA9 196 aa21.13■□□□□ 0.97
SYNE4-202ENST00000340477 NPTXRO95502 500 aa21.13■□□□□ 0.97
SYNE4-202ENST00000340477 RNASELQ05823 741 aaKnown RBP21.13■□□□□ 0.97
SYNE4-202ENST00000340477 STRN3Q13033 797 aa21.13■□□□□ 0.97
SYNE4-202ENST00000340477 MAPK7Q13164 816 aa21.13■□□□□ 0.97
SYNE4-202ENST00000340477 TIGD5Q53EQ6 642 aa21.13■□□□□ 0.97
SYNE4-202ENST00000340477 NOMO2Q5JPE7 1267 aa21.13■□□□□ 0.97
SYNE4-202ENST00000340477 SV2BQ7L1I2 683 aa21.13■□□□□ 0.97
SYNE4-202ENST00000340477 MRPL10Q7Z7H8 261 aaKnown RBP21.13■□□□□ 0.97
SYNE4-202ENST00000340477 THNSL1Q8IYQ7 743 aa21.13■□□□□ 0.97
SYNE4-202ENST00000340477 SPIRE2Q8WWL2 714 aa21.13■□□□□ 0.97
SYNE4-202ENST00000340477 REEP2Q9BRK0 252 aa21.13■□□□□ 0.97
SYNE4-202ENST00000340477 ZHX3Q9H4I2 956 aa21.13■□□□□ 0.97
SYNE4-202ENST00000340477 TMEM134Q9H6X4 195 aa21.13■□□□□ 0.97
SYNE4-202ENST00000340477 PARVGQ9HBI0 331 aa21.13■□□□□ 0.97
SYNE4-202ENST00000340477 RNF19AQ9NV58 838 aa21.13■□□□□ 0.97
SYNE4-202ENST00000340477 IPPQ9Y573 584 aa21.13■□□□□ 0.97
SYNE4-202ENST00000340477 TRANK1O15050 2925 aa21.13■□□□□ 0.97
SYNE4-202ENST00000340477 LPXNO60711 386 aa21.12■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 79.7 ms