RNA–Protein interactions for RNA: ENST00000339436.11

SRSF3-201, Transcript of serine and arginine rich splicing factor 3, humanhuman

TSL 2

Gene SRSF3, Length 1,518 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF3-201ENST00000339436 DNAJC19Q96DA6 116 aa14.17□□□□□ -0.14
SRSF3-201ENST00000339436 CCDC51Q96ER9 411 aa14.17□□□□□ -0.14
SRSF3-201ENST00000339436 NTPCRQ9BSD7 190 aaKnown RBP14.17□□□□□ -0.14
SRSF3-201ENST00000339436 RC3H2Q9HBD1 1191 aaKnown RBP14.17□□□□□ -0.14
SRSF3-201ENST00000339436 A0A0U1RQF3 1178 aa14.16□□□□□ -0.14
SRSF3-201ENST00000339436 SLC16A4O15374 487 aa14.16□□□□□ -0.14
SRSF3-201ENST00000339436 ACTN4O43707 911 aaKnown RBP14.16□□□□□ -0.14
SRSF3-201ENST00000339436 UPP2O95045 317 aa14.16□□□□□ -0.14
SRSF3-201ENST00000339436 EDN1P05305 212 aa14.16□□□□□ -0.14
SRSF3-201ENST00000339436 MYOGP15173 224 aa14.16□□□□□ -0.14
SRSF3-201ENST00000339436 AXLP30530 894 aa14.16□□□□□ -0.14
SRSF3-201ENST00000339436 NDUFA8P51970 172 aa14.16□□□□□ -0.14
SRSF3-201ENST00000339436 NCKAP1LP55160 1127 aa14.16□□□□□ -0.14
SRSF3-201ENST00000339436 FAM189BP81408 668 aa14.16□□□□□ -0.14
SRSF3-201ENST00000339436 CSPP1Q1MSJ5 1256 aa14.16□□□□□ -0.14
SRSF3-201ENST00000339436 NOTUMQ6P988 496 aa14.16□□□□□ -0.14
SRSF3-201ENST00000339436 TMEM161BQ8NDZ6 487 aa14.16□□□□□ -0.14
SRSF3-201ENST00000339436 KCNN1Q92952 543 aa14.16□□□□□ -0.14
SRSF3-201ENST00000339436 TIFAQ96CG3 184 aa14.16□□□□□ -0.14
SRSF3-201ENST00000339436 ZBED2Q9BTP6 218 aa14.16□□□□□ -0.14
SRSF3-201ENST00000339436 GOLPH3LQ9H4A5 285 aa14.16□□□□□ -0.14
SRSF3-201ENST00000339436 FAM105AQ9NUU6 356 aa14.16□□□□□ -0.14
SRSF3-201ENST00000339436 KCNG1Q9UIX4 513 aa14.16□□□□□ -0.14
SRSF3-201ENST00000339436 MSRAQ9UJ68 235 aa14.16□□□□□ -0.14
SRSF3-201ENST00000339436 COL6A3P12111 3177 aa14.15□□□□□ -0.14
SRSF3-201ENST00000339436 FRMD3A2A2Y4 597 aa14.15□□□□□ -0.14
SRSF3-201ENST00000339436 LCHNA4D1U4 455 aa14.15□□□□□ -0.14
SRSF3-201ENST00000339436 TTLL13PA6NNM8 815 aa14.15□□□□□ -0.14
SRSF3-201ENST00000339436 ACKR2O00590 384 aa14.15□□□□□ -0.14
SRSF3-201ENST00000339436 CA3P07451 260 aa14.15□□□□□ -0.14
SRSF3-201ENST00000339436 SLFN14P0C7P3 912 aa14.15□□□□□ -0.14
SRSF3-201ENST00000339436 STAG3L1P0CL83 205 aa14.15□□□□□ -0.14
SRSF3-201ENST00000339436 ATF7P17544 494 aaPredicted RBP14.15□□□□□ -0.14
SRSF3-201ENST00000339436 SYKP43405 635 aa14.15□□□□□ -0.14
SRSF3-201ENST00000339436 RAB27AP51159 221 aa14.15□□□□□ -0.14
SRSF3-201ENST00000339436 SMTNP53814 917 aa14.15□□□□□ -0.14
SRSF3-201ENST00000339436 NCBP1Q09161 790 aaKnown RBP14.15□□□□□ -0.14
SRSF3-201ENST00000339436 PRPF4BQ13523 1007 aaKnown RBP14.15□□□□□ -0.14
SRSF3-201ENST00000339436 GPR153Q6NV75 609 aa14.15□□□□□ -0.14
SRSF3-201ENST00000339436 CNNM4Q6P4Q7 775 aa14.15□□□□□ -0.14
SRSF3-201ENST00000339436 TAS1R3Q7RTX0 852 aa14.15□□□□□ -0.14
SRSF3-201ENST00000339436 ECHDC2Q86YB7 292 aa14.15□□□□□ -0.14
SRSF3-201ENST00000339436 MYCT1Q8N699 235 aa14.15□□□□□ -0.14
SRSF3-201ENST00000339436 TMEM87AQ8NBN3 555 aa14.15□□□□□ -0.14
SRSF3-201ENST00000339436 STAMQ92783 540 aa14.15□□□□□ -0.14
SRSF3-201ENST00000339436 CPB2Q96IY4 423 aa14.15□□□□□ -0.14
SRSF3-201ENST00000339436 FIZ1Q96SL8 496 aa14.15□□□□□ -0.14
SRSF3-201ENST00000339436 YME1L1Q96TA2 773 aa14.15□□□□□ -0.14
SRSF3-201ENST00000339436 RAD9AQ99638 391 aa14.15□□□□□ -0.14
SRSF3-201ENST00000339436 TRIM9Q9C026 710 aa14.15□□□□□ -0.14
SRSF3-201ENST00000339436 LRRC27Q9C0I9 530 aa14.15□□□□□ -0.14
SRSF3-201ENST00000339436 ZHX3Q9H4I2 956 aa14.15□□□□□ -0.14
SRSF3-201ENST00000339436 TMEM134Q9H6X4 195 aa14.15□□□□□ -0.14
SRSF3-201ENST00000339436 ELAC1Q9H777 363 aaKnown RBP14.15□□□□□ -0.14
SRSF3-201ENST00000339436 RNF216Q9NWF9 866 aaPredicted RBP14.15□□□□□ -0.14
SRSF3-201ENST00000339436 TMEM161AQ9NX61 479 aa14.15□□□□□ -0.14
SRSF3-201ENST00000339436 USP25Q9UHP3 1055 aa14.15□□□□□ -0.14
SRSF3-201ENST00000339436 INSL6Q9Y581 213 aa14.15□□□□□ -0.14
SRSF3-201ENST00000339436 ATG2AQ2TAZ0 1938 aa14.15□□□□□ -0.14
SRSF3-201ENST00000339436 REV3LO60673 3130 aa14.15□□□□□ -0.14
SRSF3-201ENST00000339436 MYO7AQ13402 2215 aa14.15□□□□□ -0.14
SRSF3-201ENST00000339436 PRUNE2Q8WUY3 3088 aa14.15□□□□□ -0.14
SRSF3-201ENST00000339436 TMEM265A0A087WTH1 108 aa14.15□□□□□ -0.14
SRSF3-201ENST00000339436 A0A1B0GUA9 196 aa14.15□□□□□ -0.14
SRSF3-201ENST00000339436 GOLGA6L4A6NEF3 574 aa14.15□□□□□ -0.14
SRSF3-201ENST00000339436 H0YCG3 227 aa14.15□□□□□ -0.14
SRSF3-201ENST00000339436 K7ENM7 598 aa14.15□□□□□ -0.14
SRSF3-201ENST00000339436 DGKIO75912 1065 aa14.15□□□□□ -0.14
SRSF3-201ENST00000339436 MAPTP10636 758 aaKnown RBP14.15□□□□□ -0.14
SRSF3-201ENST00000339436 GAP43P17677 238 aa14.15□□□□□ -0.14
SRSF3-201ENST00000339436 LIG1P18858 919 aa14.15□□□□□ -0.14
SRSF3-201ENST00000339436 IBSPP21815 317 aaPredicted RBP14.15□□□□□ -0.14
SRSF3-201ENST00000339436 AMPD3Q01432 767 aa14.15□□□□□ -0.14
SRSF3-201ENST00000339436 TPRNQ4KMQ1 711 aa14.15□□□□□ -0.14
SRSF3-201ENST00000339436 UBXN11Q5T124 520 aa14.15□□□□□ -0.14
SRSF3-201ENST00000339436 ZNF598Q86UK7 904 aaKnown RBP14.15□□□□□ -0.14
SRSF3-201ENST00000339436 SFR1Q86XK3 245 aa14.15□□□□□ -0.14
SRSF3-201ENST00000339436 FAM178BQ8IXR5 827 aa14.15□□□□□ -0.14
SRSF3-201ENST00000339436 CEP57L1Q8IYX8 460 aa14.15□□□□□ -0.14
SRSF3-201ENST00000339436 SP7Q8TDD2 431 aaPredicted RBP14.15□□□□□ -0.14
SRSF3-201ENST00000339436 NKX2-4Q9H2Z4 354 aa14.15□□□□□ -0.14
SRSF3-201ENST00000339436 SEL1LQ9UBV2 794 aa14.15□□□□□ -0.14
SRSF3-201ENST00000339436 SERTAD1Q9UHV2 236 aa14.15□□□□□ -0.14
SRSF3-201ENST00000339436 LRFN2Q9ULH4 789 aa14.15□□□□□ -0.14
SRSF3-201ENST00000339436 PCDHB7Q9Y5E2 793 aa14.15□□□□□ -0.14
SRSF3-201ENST00000339436 ANK1P16157 1881 aa14.14□□□□□ -0.15
SRSF3-201ENST00000339436 K7ERI5 159 aa14.14□□□□□ -0.15
SRSF3-201ENST00000339436 TRAK2O60296 914 aa14.14□□□□□ -0.15
SRSF3-201ENST00000339436 ZNF623O75123 536 aa14.14□□□□□ -0.15
SRSF3-201ENST00000339436 ARHGEF15O94989 841 aa14.14□□□□□ -0.15
SRSF3-201ENST00000339436 SKIP12755 728 aa14.14□□□□□ -0.15
SRSF3-201ENST00000339436 IDEP14735 1019 aa14.14□□□□□ -0.15
SRSF3-201ENST00000339436 SCP2P22307 547 aa14.14□□□□□ -0.15
SRSF3-201ENST00000339436 ASIC1P78348 528 aa14.14□□□□□ -0.15
SRSF3-201ENST00000339436 PPP2R2DQ66LE6 453 aa14.14□□□□□ -0.15
SRSF3-201ENST00000339436 ZNF689Q96CS4 500 aaPredicted RBP14.14□□□□□ -0.15
SRSF3-201ENST00000339436 PDZD7Q9H5P4 517 aa14.14□□□□□ -0.15
SRSF3-201ENST00000339436 OLFML3Q9NRN5 406 aa14.14□□□□□ -0.15
SRSF3-201ENST00000339436 PCDHB2Q9Y5E7 798 aa14.14□□□□□ -0.15
SRSF3-201ENST00000339436 N4BP3O15049 544 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms