RNA–Protein interactions for RNA: ENST00000338368.7

PRKDC-202, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRKDC, Length 12,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-202ENST00000338368 GNA15P30679 374 aa6.76□□□□□ -1.33
PRKDC-202ENST00000338368 HHATQ5VTY9 493 aa6.76□□□□□ -1.33
PRKDC-202ENST00000338368 C4orf19Q8IY42 314 aa6.76□□□□□ -1.33
PRKDC-202ENST00000338368 GPRC5CQ9NQ84 441 aa6.76□□□□□ -1.33
PRKDC-202ENST00000338368 GUCY2CP25092 1073 aa6.75□□□□□ -1.33
PRKDC-202ENST00000338368 DMTNQ08495 405 aa6.75□□□□□ -1.33
PRKDC-202ENST00000338368 NNTQ13423 1086 aa6.75□□□□□ -1.33
PRKDC-202ENST00000338368 ALS2CLQ60I27 953 aa6.75□□□□□ -1.33
PRKDC-202ENST00000338368 PALM2Q8IXS6 379 aa6.75□□□□□ -1.33
PRKDC-202ENST00000338368 PSMD1Q99460 953 aa6.75□□□□□ -1.33
PRKDC-202ENST00000338368 MTFR1LQ9H019 292 aa6.75□□□□□ -1.33
PRKDC-202ENST00000338368 AKAP3O75969 853 aa6.75□□□□□ -1.33
PRKDC-202ENST00000338368 SLC25A27O95847 323 aa6.75□□□□□ -1.33
PRKDC-202ENST00000338368 MNAT1P51948 309 aa6.75□□□□□ -1.33
PRKDC-202ENST00000338368 INTS9Q9NV88 658 aaKnown RBP6.75□□□□□ -1.33
PRKDC-202ENST00000338368 FRMD4AQ9P2Q2 1039 aaPredicted RBP6.75□□□□□ -1.33
PRKDC-202ENST00000338368 NUB1Q9Y5A7 615 aa6.75□□□□□ -1.33
PRKDC-202ENST00000338368 LRRD1A4D1F6 860 aa6.75□□□□□ -1.33
PRKDC-202ENST00000338368 SART1O43290 800 aaKnown RBP6.75□□□□□ -1.33
PRKDC-202ENST00000338368 SCP2P22307 547 aa6.75□□□□□ -1.33
PRKDC-202ENST00000338368 PON1P27169 355 aa6.75□□□□□ -1.33
PRKDC-202ENST00000338368 CHST13Q8NET6 341 aa6.75□□□□□ -1.33
PRKDC-202ENST00000338368 EIF3BP55884 814 aaKnown RBP6.75□□□□□ -1.33
PRKDC-202ENST00000338368 CDK17Q00537 523 aa6.75□□□□□ -1.33
PRKDC-202ENST00000338368 ZBTB16Q05516 673 aa6.75□□□□□ -1.33
PRKDC-202ENST00000338368 KCNV1Q6PIU1 500 aa6.75□□□□□ -1.33
PRKDC-202ENST00000338368 ZNF564Q8TBZ8 553 aaPredicted RBP6.75□□□□□ -1.33
PRKDC-202ENST00000338368 CALR3Q96L12 384 aaKnown RBP6.75□□□□□ -1.33
PRKDC-202ENST00000338368 CALN1Q9BXU9 219 aa6.75□□□□□ -1.33
PRKDC-202ENST00000338368 PFASO15067 1338 aa6.75□□□□□ -1.33
PRKDC-202ENST00000338368 ASB14A6NK59 587 aa6.75□□□□□ -1.33
PRKDC-202ENST00000338368 KIAA0391O15091 583 aaKnown RBP6.75□□□□□ -1.33
PRKDC-202ENST00000338368 VCAM1P19320 739 aa6.75□□□□□ -1.33
PRKDC-202ENST00000338368 PHKA2P46019 1235 aa6.75□□□□□ -1.33
PRKDC-202ENST00000338368 NFX1Q12986 1120 aaKnown RBP6.75□□□□□ -1.33
PRKDC-202ENST00000338368 TRIP13Q15645 432 aaPredicted RBP6.75□□□□□ -1.33
PRKDC-202ENST00000338368 TATDN1Q6P1N9 297 aa6.75□□□□□ -1.33
PRKDC-202ENST00000338368 FASTKD5Q7L8L6 764 aaKnown RBP6.75□□□□□ -1.33
PRKDC-202ENST00000338368 AMIGO3Q86WK7 504 aa6.75□□□□□ -1.33
PRKDC-202ENST00000338368 PASD1Q8IV76 773 aa6.75□□□□□ -1.33
PRKDC-202ENST00000338368 SYTL5Q8TDW5 730 aaPredicted RBP6.75□□□□□ -1.33
PRKDC-202ENST00000338368 VPS33BQ9H267 617 aa6.75□□□□□ -1.33
PRKDC-202ENST00000338368 SNHG28P0DPA3 235 aa6.75□□□□□ -1.33
PRKDC-202ENST00000338368 AP3M2P53677 418 aa6.75□□□□□ -1.33
PRKDC-202ENST00000338368 SNRNP35Q16560 246 aaKnown RBP6.75□□□□□ -1.33
PRKDC-202ENST00000338368 PLEKP08567 350 aaPredicted RBP6.75□□□□□ -1.33
PRKDC-202ENST00000338368 PAPD7Q5XG87 772 aaKnown RBP6.75□□□□□ -1.33
PRKDC-202ENST00000338368 CATSPER4Q7RTX7 472 aa6.75□□□□□ -1.33
PRKDC-202ENST00000338368 ANKRD13AQ8IZ07 590 aa6.75□□□□□ -1.33
PRKDC-202ENST00000338368 MORC4Q8TE76 937 aa6.75□□□□□ -1.33
PRKDC-202ENST00000338368 RNPC3Q96LT9 517 aaKnown RBP6.75□□□□□ -1.33
PRKDC-202ENST00000338368 SMARCAL1Q9NZC9 954 aa6.75□□□□□ -1.33
PRKDC-202ENST00000338368 CAPN6Q9Y6Q1 641 aa6.75□□□□□ -1.33
PRKDC-202ENST00000338368 VIL1P09327 827 aaKnown RBP6.75□□□□□ -1.33
PRKDC-202ENST00000338368 ANXA13P27216 316 aa6.75□□□□□ -1.33
PRKDC-202ENST00000338368 C2orf69Q8N8R5 385 aa6.75□□□□□ -1.33
PRKDC-202ENST00000338368 ALDH3A1P30838 453 aa6.75□□□□□ -1.33
PRKDC-202ENST00000338368 GPC3P51654 580 aa6.75□□□□□ -1.33
PRKDC-202ENST00000338368 HERVK_113P62684 666 aa6.75□□□□□ -1.33
PRKDC-202ENST00000338368 CCNI2Q6ZMN8 369 aaPredicted RBP6.75□□□□□ -1.33
PRKDC-202ENST00000338368 AKT1S1Q96B36 256 aa6.75□□□□□ -1.33
PRKDC-202ENST00000338368 CYP3A7-CYP3A51PA0A087WV96 503 aa6.75□□□□□ -1.33
PRKDC-202ENST00000338368 FOXN3O00409 490 aaPredicted RBP6.75□□□□□ -1.33
PRKDC-202ENST00000338368 BUB1BO60566 1050 aaPredicted RBP6.75□□□□□ -1.33
PRKDC-202ENST00000338368 CYP3A4P08684 503 aa6.75□□□□□ -1.33
PRKDC-202ENST00000338368 CYP3A7P24462 503 aa6.75□□□□□ -1.33
PRKDC-202ENST00000338368 HEXIM2Q96MH2 286 aaKnown RBP6.75□□□□□ -1.33
PRKDC-202ENST00000338368 SPATA33Q96N06 139 aa6.75□□□□□ -1.33
PRKDC-202ENST00000338368 SGK1O00141 431 aa6.74□□□□□ -1.33
PRKDC-202ENST00000338368 ZBTB39O15060 712 aa6.74□□□□□ -1.33
PRKDC-202ENST00000338368 TBXAS1P24557 533 aaPredicted RBP6.74□□□□□ -1.33
PRKDC-202ENST00000338368 PRKCEQ02156 737 aa6.74□□□□□ -1.33
PRKDC-202ENST00000338368 SLC51AQ86UW1 340 aa6.74□□□□□ -1.33
PRKDC-202ENST00000338368 MGARPQ8TDB4 240 aa6.74□□□□□ -1.33
PRKDC-202ENST00000338368 FAM49AQ9H0Q0 323 aaPredicted RBP6.74□□□□□ -1.33
PRKDC-202ENST00000338368 NOC2LQ9Y3T9 749 aaKnown RBP6.74□□□□□ -1.33
PRKDC-202ENST00000338368 HGSO14964 777 aaPredicted RBP6.74□□□□□ -1.33
PRKDC-202ENST00000338368 IFNAR2P48551 515 aa6.74□□□□□ -1.33
PRKDC-202ENST00000338368 SNRPFP62306 86 aaKnown RBP6.74□□□□□ -1.33
PRKDC-202ENST00000338368 IRX5P78411 483 aaPredicted RBP6.74□□□□□ -1.33
PRKDC-202ENST00000338368 KRT81Q14533 505 aa6.74□□□□□ -1.33
PRKDC-202ENST00000338368 CTAGE3PQ8IX95 158 aa6.74□□□□□ -1.33
PRKDC-202ENST00000338368 SLC5A5Q92911 643 aa6.74□□□□□ -1.33
PRKDC-202ENST00000338368 DNAJC19Q96DA6 116 aa6.74□□□□□ -1.33
PRKDC-202ENST00000338368 AMACRQ9UHK6 382 aa6.74□□□□□ -1.33
PRKDC-202ENST00000338368 NID2Q14112 1375 aa6.74□□□□□ -1.33
PRKDC-202ENST00000338368 SYNGAP1Q96PV0 1343 aa6.74□□□□□ -1.33
PRKDC-202ENST00000338368 TARSL2A2RTX5 802 aaKnown RBP6.74□□□□□ -1.33
PRKDC-202ENST00000338368 NPM3O75607 178 aaKnown RBP6.74□□□□□ -1.33
PRKDC-202ENST00000338368 CHRNA3P32297 505 aa6.74□□□□□ -1.33
PRKDC-202ENST00000338368 CIITAP33076 1130 aa6.74□□□□□ -1.33
PRKDC-202ENST00000338368 ARHGAP25P42331 645 aa6.74□□□□□ -1.33
PRKDC-202ENST00000338368 MMP14P50281 582 aa6.74□□□□□ -1.33
PRKDC-202ENST00000338368 EFNA5P52803 228 aa6.74□□□□□ -1.33
PRKDC-202ENST00000338368 MAPK8IP2Q13387 824 aaPredicted RBP6.74□□□□□ -1.33
PRKDC-202ENST00000338368 Q3C1V9 767 aa6.74□□□□□ -1.33
PRKDC-202ENST00000338368 PCNX4Q63HM2 1172 aa6.74□□□□□ -1.33
PRKDC-202ENST00000338368 RANBP17Q9H2T7 1088 aaKnown RBP6.74□□□□□ -1.33
PRKDC-202ENST00000338368 SYNPO2Q9UMS6 1093 aa6.74□□□□□ -1.33
PRKDC-202ENST00000338368 COPB2P35606 906 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms