RNA–Protein interactions for RNA: ENST00000336824.8

FNDC3B-201, Transcript of fibronectin type III domain containing 3B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FNDC3B, Length 7,904 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3B-201ENST00000336824 MKRN1Q9UHC7 482 aaKnown RBP10.02□□□□□ -0.81
FNDC3B-201ENST00000336824 TBX20Q9UMR3 447 aa10.02□□□□□ -0.81
FNDC3B-201ENST00000336824 SBF2Q86WG5 1849 aa10.02□□□□□ -0.81
FNDC3B-201ENST00000336824 CYP3A7-CYP3A51PA0A087WV96 503 aa10.02□□□□□ -0.81
FNDC3B-201ENST00000336824 ATP1A3P13637 1013 aa10.02□□□□□ -0.81
FNDC3B-201ENST00000336824 CYP3A7P24462 503 aa10.02□□□□□ -0.81
FNDC3B-201ENST00000336824 GRB10Q13322 594 aa10.02□□□□□ -0.81
FNDC3B-201ENST00000336824 FAM149B1Q96BN6 582 aa10.02□□□□□ -0.81
FNDC3B-201ENST00000336824 TAF1LQ8IZX4 1826 aa10.02□□□□□ -0.81
FNDC3B-201ENST00000336824 OPA1O60313 960 aa10.02□□□□□ -0.81
FNDC3B-201ENST00000336824 MED24O75448 989 aa10.02□□□□□ -0.81
FNDC3B-201ENST00000336824 MAPTP10636 758 aaKnown RBP10.02□□□□□ -0.81
FNDC3B-201ENST00000336824 RHOT2Q8IXI1 618 aa10.02□□□□□ -0.81
FNDC3B-201ENST00000336824 RSAD2Q8WXG1 361 aa10.02□□□□□ -0.81
FNDC3B-201ENST00000336824 CLMNQ96JQ2 1002 aa10.02□□□□□ -0.81
FNDC3B-201ENST00000336824 DESI2Q9BSY9 194 aa10.02□□□□□ -0.81
FNDC3B-201ENST00000336824 MFAP3LO75121 409 aa10.02□□□□□ -0.81
FNDC3B-201ENST00000336824 RBP5P82980 135 aa10.02□□□□□ -0.81
FNDC3B-201ENST00000336824 TMEM132BQ14DG7 1078 aa10.02□□□□□ -0.81
FNDC3B-201ENST00000336824 OTOP1Q7RTM1 612 aa10.02□□□□□ -0.81
FNDC3B-201ENST00000336824 TMEM35BQ8NCS4 154 aa10.02□□□□□ -0.81
FNDC3B-201ENST00000336824 TINF2Q9BSI4 451 aa10.02□□□□□ -0.81
FNDC3B-201ENST00000336824 FRMD4AQ9P2Q2 1039 aaPredicted RBP10.02□□□□□ -0.81
FNDC3B-201ENST00000336824 SHANK3Q9BYB0 1731 aa10.02□□□□□ -0.81
FNDC3B-201ENST00000336824 A0A1W2PRG0 241 aa10.02□□□□□ -0.81
FNDC3B-201ENST00000336824 FOXN1O15353 648 aa10.02□□□□□ -0.81
FNDC3B-201ENST00000336824 CALB1P05937 261 aa10.02□□□□□ -0.81
FNDC3B-201ENST00000336824 GUCY2CP25092 1073 aa10.02□□□□□ -0.81
FNDC3B-201ENST00000336824 NLRP11P59045 1033 aaKnown RBP10.02□□□□□ -0.81
FNDC3B-201ENST00000336824 GLB1LQ6UWU2 654 aa10.02□□□□□ -0.81
FNDC3B-201ENST00000336824 GPR142Q7Z601 462 aa10.02□□□□□ -0.81
FNDC3B-201ENST00000336824 TLK2Q86UE8 772 aa10.02□□□□□ -0.81
FNDC3B-201ENST00000336824 KBTBD4Q9NVX7 518 aa10.02□□□□□ -0.81
FNDC3B-201ENST00000336824 FAM169AQ9Y6X4 670 aa10.02□□□□□ -0.81
FNDC3B-201ENST00000336824 KCNK3O14649 394 aa10.01□□□□□ -0.81
FNDC3B-201ENST00000336824 CLTAP09496 248 aa10.01□□□□□ -0.81
FNDC3B-201ENST00000336824 MAN1A1P33908 653 aa10.01□□□□□ -0.81
FNDC3B-201ENST00000336824 MAP2K5Q13163 448 aa10.01□□□□□ -0.81
FNDC3B-201ENST00000336824 LONRF2Q1L5Z9 754 aa10.01□□□□□ -0.81
FNDC3B-201ENST00000336824 USP49Q70CQ1 688 aa10.01□□□□□ -0.81
FNDC3B-201ENST00000336824 ERICH1Q86X53 443 aa10.01□□□□□ -0.81
FNDC3B-201ENST00000336824 DHX40Q8IX18 779 aaKnown RBP10.01□□□□□ -0.81
FNDC3B-201ENST00000336824 CCDC105Q8IYK2 499 aa10.01□□□□□ -0.81
FNDC3B-201ENST00000336824 IFT81Q8WYA0 676 aa10.01□□□□□ -0.81
FNDC3B-201ENST00000336824 TNIP3Q96KP6 325 aa10.01□□□□□ -0.81
FNDC3B-201ENST00000336824 APBA2Q99767 749 aa10.01□□□□□ -0.81
FNDC3B-201ENST00000336824 TRPA1O75762 1119 aa10.01□□□□□ -0.81
FNDC3B-201ENST00000336824 ITGA4P13612 1032 aa10.01□□□□□ -0.81
FNDC3B-201ENST00000336824 SARNPP82979 210 aaKnown RBP10.01□□□□□ -0.81
FNDC3B-201ENST00000336824 WHAMMP3Q1A5X7 153 aa10.01□□□□□ -0.81
FNDC3B-201ENST00000336824 ZNF668Q96K58 619 aaPredicted RBP10.01□□□□□ -0.81
FNDC3B-201ENST00000336824 STARD7Q9NQZ5 370 aa10.01□□□□□ -0.81
FNDC3B-201ENST00000336824 NFASCO94856 1347 aa10.01□□□□□ -0.81
FNDC3B-201ENST00000336824 A0A0G2JLL6 359 aaPredicted RBP10.01□□□□□ -0.81
FNDC3B-201ENST00000336824 FKTNO75072 461 aa10.01□□□□□ -0.81
FNDC3B-201ENST00000336824 CTSHP09668 335 aa10.01□□□□□ -0.81
FNDC3B-201ENST00000336824 MYBP10242 640 aa10.01□□□□□ -0.81
FNDC3B-201ENST00000336824 LMNB2Q03252 620 aa10.01□□□□□ -0.81
FNDC3B-201ENST00000336824 PRRT2Q7Z6L0 340 aaPredicted RBP10.01□□□□□ -0.81
FNDC3B-201ENST00000336824 VSIG10LQ86VR7 867 aa10.01□□□□□ -0.81
FNDC3B-201ENST00000336824 SH2D3AQ9BRG2 576 aa10.01□□□□□ -0.81
FNDC3B-201ENST00000336824 POLD4Q9HCU8 107 aa10.01□□□□□ -0.81
FNDC3B-201ENST00000336824 ASIC3Q9UHC3 531 aa10.01□□□□□ -0.81
FNDC3B-201ENST00000336824 FAM86B1E9PN63 330 aa10.01□□□□□ -0.81
FNDC3B-201ENST00000336824 FAM86B2P0C5J1 330 aa10.01□□□□□ -0.81
FNDC3B-201ENST00000336824 CNTN2Q02246 1040 aa10.01□□□□□ -0.81
FNDC3B-201ENST00000336824 LY6KQ17RY6 165 aa10.01□□□□□ -0.81
FNDC3B-201ENST00000336824 LRRC71Q8N4P6 559 aa10.01□□□□□ -0.81
FNDC3B-201ENST00000336824 MICAL1Q8TDZ2 1067 aa10.01□□□□□ -0.81
FNDC3B-201ENST00000336824 ARL13BQ3SXY8 428 aa10.01□□□□□ -0.81
FNDC3B-201ENST00000336824 SPRYD7Q5W111 196 aa10.01□□□□□ -0.81
FNDC3B-201ENST00000336824 CD302Q8IX05 232 aa10.01□□□□□ -0.81
FNDC3B-201ENST00000336824 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.01□□□□□ -0.81
FNDC3B-201ENST00000336824 RGS17Q9UGC6 210 aaPredicted RBP10.01□□□□□ -0.81
FNDC3B-201ENST00000336824 NID2Q14112 1375 aa10.01□□□□□ -0.81
FNDC3B-201ENST00000336824 LY75O60449 1722 aa10.01□□□□□ -0.81
FNDC3B-201ENST00000336824 P4HA2O15460 535 aa10.01□□□□□ -0.81
FNDC3B-201ENST00000336824 BUB1O43683 1085 aa10.01□□□□□ -0.81
FNDC3B-201ENST00000336824 CABYRO75952 493 aa10.01□□□□□ -0.81
FNDC3B-201ENST00000336824 NDUFA10O95299 355 aa10.01□□□□□ -0.81
FNDC3B-201ENST00000336824 EIF4A3P38919 411 aaKnown RBP10.01□□□□□ -0.81
FNDC3B-201ENST00000336824 PTGER2P43116 358 aa10.01□□□□□ -0.81
FNDC3B-201ENST00000336824 RBM10P98175 930 aaKnown RBP10.01□□□□□ -0.81
FNDC3B-201ENST00000336824 CFAP58Q5T655 872 aa10.01□□□□□ -0.81
FNDC3B-201ENST00000336824 TMEM270Q6UE05 265 aa10.01□□□□□ -0.81
FNDC3B-201ENST00000336824 TOGARAM2Q6ZUX3 1019 aa10.01□□□□□ -0.81
FNDC3B-201ENST00000336824 PCDHB7Q9Y5E2 793 aa10.01□□□□□ -0.81
FNDC3B-201ENST00000336824 THPOP40225 353 aa10□□□□□ -0.81
FNDC3B-201ENST00000336824 PPM1FP49593 454 aaPredicted RBP10□□□□□ -0.81
FNDC3B-201ENST00000336824 TAF2Q6P1X5 1199 aa10□□□□□ -0.81
FNDC3B-201ENST00000336824 EP400NLQ6ZTU2 488 aa10□□□□□ -0.81
FNDC3B-201ENST00000336824 RASGRP2Q7LDG7 609 aa10□□□□□ -0.81
FNDC3B-201ENST00000336824 CCDC25Q86WR0 208 aa10□□□□□ -0.81
FNDC3B-201ENST00000336824 XPNPEP3Q9NQH7 507 aa10□□□□□ -0.81
FNDC3B-201ENST00000336824 ABHD10Q9NUJ1 306 aa10□□□□□ -0.81
FNDC3B-201ENST00000336824 HPSEQ9Y251 543 aa10□□□□□ -0.81
FNDC3B-201ENST00000336824 NPEPPSP55786 919 aa10□□□□□ -0.81
FNDC3B-201ENST00000336824 MOB2Q70IA6 237 aa10□□□□□ -0.81
FNDC3B-201ENST00000336824 INTS2Q9H0H0 1204 aaKnown RBP10□□□□□ -0.81
FNDC3B-201ENST00000336824 TRIM17Q9Y577 477 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms