RNA–Protein interactions for RNA: ENST00000329758.5

TRIM49-201, Transcript of tripartite motif containing 49, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TRIM49, Length 2,163 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49-201ENST00000329758 RASA1P20936 1047 aa8.04□□□□□ -1.12
TRIM49-201ENST00000329758 CXCR5P32302 372 aa8.04□□□□□ -1.12
TRIM49-201ENST00000329758 RASSF2P50749 326 aa8.04□□□□□ -1.12
TRIM49-201ENST00000329758 GEMIN4P57678 1058 aaKnown RBP8.04□□□□□ -1.12
TRIM49-201ENST00000329758 RASSF7Q02833 373 aa8.04□□□□□ -1.12
TRIM49-201ENST00000329758 DHX9Q08211 1270 aaKnown RBP8.04□□□□□ -1.12
TRIM49-201ENST00000329758 FUT2Q10981 343 aa8.04□□□□□ -1.12
TRIM49-201ENST00000329758 CYLC2Q14093 348 aaPredicted RBP8.04□□□□□ -1.12
TRIM49-201ENST00000329758 CCDC6Q16204 474 aa8.04□□□□□ -1.12
TRIM49-201ENST00000329758 SPDYAQ5MJ70 313 aa8.04□□□□□ -1.12
TRIM49-201ENST00000329758 SPTY2D1Q68D10 685 aaPredicted RBP8.04□□□□□ -1.12
TRIM49-201ENST00000329758 ZNF280DQ6N043 979 aa8.04□□□□□ -1.12
TRIM49-201ENST00000329758 C16orf87Q6PH81 154 aa8.04□□□□□ -1.12
TRIM49-201ENST00000329758 SPATA31D4Q6ZUB0 917 aa8.04□□□□□ -1.12
TRIM49-201ENST00000329758 SCUBE1Q8IWY4 988 aa8.04□□□□□ -1.12
TRIM49-201ENST00000329758 TRIM22Q8IYM9 498 aa8.04□□□□□ -1.12
TRIM49-201ENST00000329758 FITM2Q8N6M3 262 aa8.04□□□□□ -1.12
TRIM49-201ENST00000329758 USP38Q8NB14 1042 aa8.04□□□□□ -1.12
TRIM49-201ENST00000329758 RPGRQ92834 1020 aaKnown RBP8.04□□□□□ -1.12
TRIM49-201ENST00000329758 GPKOWQ92917 476 aaPredicted RBP eCLIP8.04□□□□□ -1.12
TRIM49-201ENST00000329758 RNF25Q96BH1 459 aaPredicted RBP8.04□□□□□ -1.12
TRIM49-201ENST00000329758 SNX27Q96L92 541 aa8.04□□□□□ -1.12
TRIM49-201ENST00000329758 PRMT1Q99873 361 aaKnown RBP8.04□□□□□ -1.12
TRIM49-201ENST00000329758 DDX23Q9BUQ8 820 aaKnown RBP8.04□□□□□ -1.12
TRIM49-201ENST00000329758 BRIP1Q9BX63 1249 aa8.04□□□□□ -1.12
TRIM49-201ENST00000329758 CRNKL1Q9BZJ0 848 aaKnown RBP8.04□□□□□ -1.12
TRIM49-201ENST00000329758 ANKRD2Q9GZV1 360 aa8.04□□□□□ -1.12
TRIM49-201ENST00000329758 DHX36Q9H2U1 1008 aaKnown RBP8.04□□□□□ -1.12
TRIM49-201ENST00000329758 METTL14Q9HCE5 456 aaKnown RBP8.04□□□□□ -1.12
TRIM49-201ENST00000329758 FAIMQ9NVQ4 179 aa8.04□□□□□ -1.12
TRIM49-201ENST00000329758 PNMA3Q9UL41 463 aa8.04□□□□□ -1.12
TRIM49-201ENST00000329758 CD2APQ9Y5K6 639 aa8.04□□□□□ -1.12
TRIM49-201ENST00000329758 SRPRBQ9Y5M8 271 aaKnown RBP8.04□□□□□ -1.12
TRIM49-201ENST00000329758 COL11A2P13942 1736 aaPredicted RBP8.04□□□□□ -1.12
TRIM49-201ENST00000329758 MYH4Q9Y623 1939 aa8.04□□□□□ -1.12
TRIM49-201ENST00000329758 PASKQ96RG2 1323 aa8.04□□□□□ -1.12
TRIM49-201ENST00000329758 H7C1D1 291 aa8.04□□□□□ -1.12
TRIM49-201ENST00000329758 ZNF263O14978 683 aa8.04□□□□□ -1.12
TRIM49-201ENST00000329758 HNRNPCL1O60812 293 aaKnown RBP8.04□□□□□ -1.12
TRIM49-201ENST00000329758 LDHBP07195 334 aaKnown RBP8.04□□□□□ -1.12
TRIM49-201ENST00000329758 GOLGA8HP0CJ92 632 aa8.04□□□□□ -1.12
TRIM49-201ENST00000329758 SRGNP10124 158 aa8.04□□□□□ -1.12
TRIM49-201ENST00000329758 GM2AP17900 193 aa8.04□□□□□ -1.12
TRIM49-201ENST00000329758 FUT4P22083 530 aa8.04□□□□□ -1.12
TRIM49-201ENST00000329758 SERPINB3P29508 390 aa8.04□□□□□ -1.12
TRIM49-201ENST00000329758 HOXA10P31260 410 aaPredicted RBP8.04□□□□□ -1.12
TRIM49-201ENST00000329758 STIP1P31948 543 aaKnown RBP8.04□□□□□ -1.12
TRIM49-201ENST00000329758 RTP1P59025 263 aa8.04□□□□□ -1.12
TRIM49-201ENST00000329758 AP1B1Q10567 949 aa8.04□□□□□ -1.12
TRIM49-201ENST00000329758 TROAPQ12815 778 aa8.04□□□□□ -1.12
TRIM49-201ENST00000329758 KRT72Q14CN4 511 aa8.04□□□□□ -1.12
TRIM49-201ENST00000329758 PDCD4Q53EL6 469 aaKnown RBP8.04□□□□□ -1.12
TRIM49-201ENST00000329758 OLFML2BQ68BL8 750 aa8.04□□□□□ -1.12
TRIM49-201ENST00000329758 LRRC74BQ6ZQY2 392 aa8.04□□□□□ -1.12
TRIM49-201ENST00000329758 INTS8Q75QN2 995 aaKnown RBP8.04□□□□□ -1.12
TRIM49-201ENST00000329758 TAOK1Q7L7X3 1001 aa8.04□□□□□ -1.12
TRIM49-201ENST00000329758 CATIPQ7Z7H3 387 aa8.04□□□□□ -1.12
TRIM49-201ENST00000329758 SUPT20HQ8NEM7 779 aa8.04□□□□□ -1.12
TRIM49-201ENST00000329758 RASGRP4Q8TDF6 673 aa8.04□□□□□ -1.12
TRIM49-201ENST00000329758 NELFBQ8WX92 580 aa8.04□□□□□ -1.12
TRIM49-201ENST00000329758 STAMQ92783 540 aa8.04□□□□□ -1.12
TRIM49-201ENST00000329758 ABTB1Q969K4 478 aaPredicted RBP8.04□□□□□ -1.12
TRIM49-201ENST00000329758 GRAMD1AQ96CP6 724 aa8.04□□□□□ -1.12
TRIM49-201ENST00000329758 SIKE1Q9BRV8 207 aa8.04□□□□□ -1.12
TRIM49-201ENST00000329758 HESX1Q9UBX0 185 aa8.04□□□□□ -1.12
TRIM49-201ENST00000329758 POLLQ9UGP5 575 aa8.04□□□□□ -1.12
TRIM49-201ENST00000329758 DDX52Q9Y2R4 599 aaKnown RBP eCLIP8.04□□□□□ -1.12
TRIM49-201ENST00000329758 STK36Q9NRP7 1315 aa8.03□□□□□ -1.12
TRIM49-201ENST00000329758 hCG_2014768A0A024R1R8 64 aa8.03□□□□□ -1.12
TRIM49-201ENST00000329758 A0A087X0B3 334 aa8.03□□□□□ -1.12
TRIM49-201ENST00000329758 LSM1O15116 133 aaKnown RBP8.03□□□□□ -1.12
TRIM49-201ENST00000329758 NCK2O43639 380 aa8.03□□□□□ -1.12
TRIM49-201ENST00000329758 DEXIO95424 95 aa8.03□□□□□ -1.12
TRIM49-201ENST00000329758 CCNFP41002 786 aa8.03□□□□□ -1.12
TRIM49-201ENST00000329758 RAB15P59190 212 aa8.03□□□□□ -1.12
TRIM49-201ENST00000329758 ARPC4P59998 168 aa8.03□□□□□ -1.12
TRIM49-201ENST00000329758 PSMC1P62191 440 aaKnown RBP8.03□□□□□ -1.12
TRIM49-201ENST00000329758 TFAP4Q01664 338 aa8.03□□□□□ -1.12
TRIM49-201ENST00000329758 ZNF174Q15697 407 aa8.03□□□□□ -1.12
TRIM49-201ENST00000329758 RILPL1Q5EBL4 403 aa8.03□□□□□ -1.12
TRIM49-201ENST00000329758 TCERG1LQ5VWI1 586 aa8.03□□□□□ -1.12
TRIM49-201ENST00000329758 SNX30Q5VWJ9 437 aa8.03□□□□□ -1.12
TRIM49-201ENST00000329758 NELFCDQ8IXH7 590 aa8.03□□□□□ -1.12
TRIM49-201ENST00000329758 PDCD7Q8N8D1 485 aaKnown RBP8.03□□□□□ -1.12
TRIM49-201ENST00000329758 SCG3Q8WXD2 468 aaKnown RBP8.03□□□□□ -1.12
TRIM49-201ENST00000329758 SEC14L1Q92503 715 aa8.03□□□□□ -1.12
TRIM49-201ENST00000329758 EPSTI1Q96J88 318 aa8.03□□□□□ -1.12
TRIM49-201ENST00000329758 MS4A14Q96JA4 679 aa8.03□□□□□ -1.12
TRIM49-201ENST00000329758 AGBL1Q96MI9 1066 aa8.03□□□□□ -1.12
TRIM49-201ENST00000329758 ZMAT2Q96NC0 199 aaKnown RBP8.03□□□□□ -1.12
TRIM49-201ENST00000329758 PSMB7Q99436 277 aa8.03□□□□□ -1.12
TRIM49-201ENST00000329758 CGREF1Q99674 301 aa8.03□□□□□ -1.12
TRIM49-201ENST00000329758 ZNF184Q99676 751 aaPredicted RBP8.03□□□□□ -1.12
TRIM49-201ENST00000329758 HNRNPABQ99729 332 aaKnown RBP8.03□□□□□ -1.12
TRIM49-201ENST00000329758 ASCC2Q9H1I8 757 aaPredicted RBP8.03□□□□□ -1.12
TRIM49-201ENST00000329758 TAOK3Q9H2K8 898 aa8.03□□□□□ -1.12
TRIM49-201ENST00000329758 IL17RBQ9NRM6 502 aa8.03□□□□□ -1.12
TRIM49-201ENST00000329758 STK32BQ9NY57 414 aa8.03□□□□□ -1.12
TRIM49-201ENST00000329758 KLHL14Q9P2G3 628 aa8.03□□□□□ -1.12
TRIM49-201ENST00000329758 ZNF219Q9P2Y4 722 aaPredicted RBP8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms