RNA–Protein interactions for RNA: ENST00000329399.6

PDLIM1-201, Transcript of PDZ and LIM domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM1, Length 1,452 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-201ENST00000329399 MYMKA6NI61 221 aa18.11■□□□□ 0.49
PDLIM1-201ENST00000329399 CA3P07451 260 aa18.11■□□□□ 0.49
PDLIM1-201ENST00000329399 KCNJ6P48051 423 aa18.11■□□□□ 0.49
PDLIM1-201ENST00000329399 MYOCDQ8IZQ8 938 aa18.11■□□□□ 0.49
PDLIM1-201ENST00000329399 DDX12PQ92771 950 aa18.11■□□□□ 0.49
PDLIM1-201ENST00000329399 SLC9A7Q96T83 725 aa18.11■□□□□ 0.49
PDLIM1-201ENST00000329399 IMPACTQ9P2X3 320 aa18.11■□□□□ 0.49
PDLIM1-201ENST00000329399 NFE2L3Q9Y4A8 694 aa18.11■□□□□ 0.49
PDLIM1-201ENST00000329399 PCDHA11Q9Y5I1 949 aa18.11■□□□□ 0.49
PDLIM1-201ENST00000329399 XIRP2A4UGR9 3374 aa18.11■□□□□ 0.49
PDLIM1-201ENST00000329399 VCANP13611 3396 aa18.1■□□□□ 0.49
PDLIM1-201ENST00000329399 UPP2O95045 317 aa18.1■□□□□ 0.49
PDLIM1-201ENST00000329399 LYPLA2O95372 231 aa18.1■□□□□ 0.49
PDLIM1-201ENST00000329399 GJB5O95377 273 aa18.1■□□□□ 0.49
PDLIM1-201ENST00000329399 ZNF18P17022 549 aa18.1■□□□□ 0.49
PDLIM1-201ENST00000329399 FGFR4P22455 802 aa18.1■□□□□ 0.49
PDLIM1-201ENST00000329399 GPC3P51654 580 aa18.1■□□□□ 0.49
PDLIM1-201ENST00000329399 CRYBB1P53674 252 aaPredicted RBP18.1■□□□□ 0.49
PDLIM1-201ENST00000329399 TPD52L1Q16890 204 aaPredicted RBP18.1■□□□□ 0.49
PDLIM1-201ENST00000329399 XKR9Q5GH70 373 aa18.1■□□□□ 0.49
PDLIM1-201ENST00000329399 ZNF697Q5TEC3 545 aa18.1■□□□□ 0.49
PDLIM1-201ENST00000329399 FAM228AQ86W67 206 aa18.1■□□□□ 0.49
PDLIM1-201ENST00000329399 ANKRD20A12PQ8NF67 263 aa18.1■□□□□ 0.49
PDLIM1-201ENST00000329399 TMEM143Q96AN5 459 aa18.1■□□□□ 0.49
PDLIM1-201ENST00000329399 CDX2Q99626 313 aaPredicted RBP18.1■□□□□ 0.49
PDLIM1-201ENST00000329399 DHX33Q9H6R0 707 aaKnown RBP18.1■□□□□ 0.49
PDLIM1-201ENST00000329399 ERVK-5Q9HDB9 667 aa18.1■□□□□ 0.49
PDLIM1-201ENST00000329399 XPNPEP1Q9NQW7 623 aa18.1■□□□□ 0.49
PDLIM1-201ENST00000329399 MSRAQ9UJ68 235 aa18.1■□□□□ 0.49
PDLIM1-201ENST00000329399 ST3GAL5Q9UNP4 418 aa18.1■□□□□ 0.49
PDLIM1-201ENST00000329399 M0QZ92 97 aa18.09■□□□□ 0.49
PDLIM1-201ENST00000329399 AP5Z1O43299 807 aa18.09■□□□□ 0.49
PDLIM1-201ENST00000329399 CDK11BP21127 795 aaKnown RBP18.09■□□□□ 0.49
PDLIM1-201ENST00000329399 CASP1P29466 404 aa18.09■□□□□ 0.49
PDLIM1-201ENST00000329399 SLC12A3P55017 1021 aa18.09■□□□□ 0.49
PDLIM1-201ENST00000329399 FANCCQ00597 558 aa18.09■□□□□ 0.49
PDLIM1-201ENST00000329399 NFX1Q12986 1120 aaKnown RBP18.09■□□□□ 0.49
PDLIM1-201ENST00000329399 POTEGQ6S5H5 508 aa18.09■□□□□ 0.49
PDLIM1-201ENST00000329399 LRRC15Q8TF66 581 aa18.09■□□□□ 0.49
PDLIM1-201ENST00000329399 TOP1MTQ969P6 601 aa18.09■□□□□ 0.49
PDLIM1-201ENST00000329399 CERS4Q9HA82 394 aa18.09■□□□□ 0.49
PDLIM1-201ENST00000329399 FANCLQ9NW38 375 aa18.09■□□□□ 0.49
PDLIM1-201ENST00000329399 SUCLA2Q9P2R7 463 aaPredicted RBP18.09■□□□□ 0.49
PDLIM1-201ENST00000329399 EPOPA6NHQ4 379 aa18.08■□□□□ 0.49
PDLIM1-201ENST00000329399 RFXAPO00287 272 aa18.08■□□□□ 0.49
PDLIM1-201ENST00000329399 TLL1O43897 1013 aa18.08■□□□□ 0.49
PDLIM1-201ENST00000329399 FGFR1OPO95684 399 aaKnown RBP18.08■□□□□ 0.49
PDLIM1-201ENST00000329399 SERPINC1P01008 464 aa18.08■□□□□ 0.49
PDLIM1-201ENST00000329399 TMOD1P28289 359 aa18.08■□□□□ 0.49
PDLIM1-201ENST00000329399 PRCPP42785 496 aa18.08■□□□□ 0.49
PDLIM1-201ENST00000329399 TAP1Q03518 808 aa18.08■□□□□ 0.49
PDLIM1-201ENST00000329399 EHHADHQ08426 723 aa18.08■□□□□ 0.49
PDLIM1-201ENST00000329399 RAB30Q15771 203 aa18.08■□□□□ 0.49
PDLIM1-201ENST00000329399 KCNK18Q7Z418 384 aa18.08■□□□□ 0.49
PDLIM1-201ENST00000329399 CRIPAKQ8N1N5 446 aa18.08■□□□□ 0.49
PDLIM1-201ENST00000329399 GUF1Q8N442 669 aaKnown RBP18.08■□□□□ 0.49
PDLIM1-201ENST00000329399 APBB2Q92870 758 aa18.08■□□□□ 0.49
PDLIM1-201ENST00000329399 DNAJC19Q96DA6 116 aa18.08■□□□□ 0.49
PDLIM1-201ENST00000329399 SQORQ9Y6N5 450 aa18.08■□□□□ 0.49
PDLIM1-201ENST00000329399 TTC3P53804 2025 aa18.08■□□□□ 0.48
PDLIM1-201ENST00000329399 A0A087WZ62 844 aa18.07■□□□□ 0.48
PDLIM1-201ENST00000329399 FRMD3A2A2Y4 597 aa18.07■□□□□ 0.48
PDLIM1-201ENST00000329399 RPS6KA5O75582 802 aa18.07■□□□□ 0.48
PDLIM1-201ENST00000329399 RPLP2P05387 115 aaKnown RBP18.07■□□□□ 0.48
PDLIM1-201ENST00000329399 CD44P16070 742 aaKnown RBP18.07■□□□□ 0.48
PDLIM1-201ENST00000329399 GAP43P17677 238 aa18.07■□□□□ 0.48
PDLIM1-201ENST00000329399 CCNE1P24864 410 aa18.07■□□□□ 0.48
PDLIM1-201ENST00000329399 RARRES1P49788 294 aa18.07■□□□□ 0.48
PDLIM1-201ENST00000329399 PAK2Q13177 524 aa18.07■□□□□ 0.48
PDLIM1-201ENST00000329399 GPBP1Q86WP2 473 aa18.07■□□□□ 0.48
PDLIM1-201ENST00000329399 RHPN2Q8IUC4 686 aa18.07■□□□□ 0.48
PDLIM1-201ENST00000329399 DRC7Q8IY82 874 aa18.07■□□□□ 0.48
PDLIM1-201ENST00000329399 PRPF31Q8WWY3 499 aaKnown RBP18.07■□□□□ 0.48
PDLIM1-201ENST00000329399 NELFBQ8WX92 580 aa18.07■□□□□ 0.48
PDLIM1-201ENST00000329399 MYLIPQ8WY64 445 aa18.07■□□□□ 0.48
PDLIM1-201ENST00000329399 MAP7D2Q96T17 732 aa18.07■□□□□ 0.48
PDLIM1-201ENST00000329399 FDXACB1Q9BRP7 624 aaPredicted RBP18.07■□□□□ 0.48
PDLIM1-201ENST00000329399 ZBED2Q9BTP6 218 aa18.07■□□□□ 0.48
PDLIM1-201ENST00000329399 TIPINQ9BVW5 301 aa18.07■□□□□ 0.48
PDLIM1-201ENST00000329399 HSD3B7Q9H2F3 369 aa18.07■□□□□ 0.48
PDLIM1-201ENST00000329399 PRDM12Q9H4Q4 367 aa18.07■□□□□ 0.48
PDLIM1-201ENST00000329399 POLD4Q9HCU8 107 aa18.07■□□□□ 0.48
PDLIM1-201ENST00000329399 DBR1Q9UK59 544 aaKnown RBP18.07■□□□□ 0.48
PDLIM1-201ENST00000329399 E9PMD0 336 aa18.07■□□□□ 0.48
PDLIM1-201ENST00000329399 EFCAB14O75071 495 aa18.07■□□□□ 0.48
PDLIM1-201ENST00000329399 AMHP03971 560 aa18.07■□□□□ 0.48
PDLIM1-201ENST00000329399 KRT18P05783 430 aaKnown RBP18.07■□□□□ 0.48
PDLIM1-201ENST00000329399 CYP11B2P19099 503 aa18.07■□□□□ 0.48
PDLIM1-201ENST00000329399 UBASH3AP57075 661 aa18.07■□□□□ 0.48
PDLIM1-201ENST00000329399 GSDMDP57764 484 aa18.07■□□□□ 0.48
PDLIM1-201ENST00000329399 FILIP1LQ4L180 1135 aa18.07■□□□□ 0.48
PDLIM1-201ENST00000329399 CDKAL1Q5VV42 579 aa18.07■□□□□ 0.48
PDLIM1-201ENST00000329399 OTUD6AQ7L8S5 288 aa18.07■□□□□ 0.48
PDLIM1-201ENST00000329399 FAM114A1Q8IWE2 563 aa18.07■□□□□ 0.48
PDLIM1-201ENST00000329399 USP38Q8NB14 1042 aa18.07■□□□□ 0.48
PDLIM1-201ENST00000329399 RAD9AQ99638 391 aa18.07■□□□□ 0.48
PDLIM1-201ENST00000329399 THAP9Q9H5L6 903 aa18.07■□□□□ 0.48
PDLIM1-201ENST00000329399 SLC28A3Q9HAS3 691 aa18.07■□□□□ 0.48
PDLIM1-201ENST00000329399 ANKEF1Q9NU02 776 aa18.07■□□□□ 0.48
PDLIM1-201ENST00000329399 PANK4Q9NVE7 773 aa18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms