RNA–Protein interactions for RNA: ENST00000328300.10

COL4A5-201, Transcript of collagen type IV alpha 5 chain, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene COL4A5, Length 6,483 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-201ENST00000328300 LRRC8CQ8TDW0 803 aa12.2□□□□□ -0.46
COL4A5-201ENST00000328300 SH3TC2Q8TF17 1288 aa12.2□□□□□ -0.46
COL4A5-201ENST00000328300 RFFLQ8WZ73 363 aa12.2□□□□□ -0.46
COL4A5-201ENST00000328300 SYN2Q92777 582 aaPredicted RBP12.2□□□□□ -0.46
COL4A5-201ENST00000328300 CAPS2Q9BXY5 557 aa12.2□□□□□ -0.46
COL4A5-201ENST00000328300 IFT172Q9UG01 1749 aa12.2□□□□□ -0.46
COL4A5-201ENST00000328300 FAM187AA6NFU0 413 aa12.2□□□□□ -0.46
COL4A5-201ENST00000328300 KPNA6O60684 536 aa12.2□□□□□ -0.46
COL4A5-201ENST00000328300 ZRANB2O95218 330 aaKnown RBP eCLIP12.2□□□□□ -0.46
COL4A5-201ENST00000328300 GNA15P30679 374 aa12.2□□□□□ -0.46
COL4A5-201ENST00000328300 PDE1BQ01064 536 aa12.2□□□□□ -0.46
COL4A5-201ENST00000328300 THOC5Q13769 683 aaKnown RBP12.2□□□□□ -0.46
COL4A5-201ENST00000328300 SPDYE2Q495Y8 402 aa12.2□□□□□ -0.46
COL4A5-201ENST00000328300 Q4G0T1 1027 aa12.2□□□□□ -0.46
COL4A5-201ENST00000328300 TMEM270Q6UE05 265 aa12.2□□□□□ -0.46
COL4A5-201ENST00000328300 CCNYQ8ND76 341 aa12.2□□□□□ -0.46
COL4A5-201ENST00000328300 DPF2Q92785 391 aa12.2□□□□□ -0.46
COL4A5-201ENST00000328300 CALN1Q9BXU9 219 aa12.2□□□□□ -0.46
COL4A5-201ENST00000328300 STK33Q9BYT3 514 aa12.2□□□□□ -0.46
COL4A5-201ENST00000328300 HPS5Q9UPZ3 1129 aa12.2□□□□□ -0.46
COL4A5-201ENST00000328300 TRIM49BA6NDI0 452 aa12.2□□□□□ -0.46
COL4A5-201ENST00000328300 HSPA8P11142 646 aaKnown RBP12.2□□□□□ -0.46
COL4A5-201ENST00000328300 PCK1P35558 622 aa12.2□□□□□ -0.46
COL4A5-201ENST00000328300 DRAP1Q14919 205 aaPredicted RBP12.2□□□□□ -0.46
COL4A5-201ENST00000328300 ZNF526Q8TF50 670 aaPredicted RBP12.2□□□□□ -0.46
COL4A5-201ENST00000328300 NUDT12Q9BQG2 462 aa12.2□□□□□ -0.46
COL4A5-201ENST00000328300 UVRAGQ9P2Y5 699 aa12.2□□□□□ -0.46
COL4A5-201ENST00000328300 FAM8A1Q9UBU6 413 aa12.2□□□□□ -0.46
COL4A5-201ENST00000328300 BUB1BO60566 1050 aaPredicted RBP12.2□□□□□ -0.46
COL4A5-201ENST00000328300 ZNF157P51786 506 aaPredicted RBP12.2□□□□□ -0.46
COL4A5-201ENST00000328300 SGSM1Q2NKQ1 1148 aa12.2□□□□□ -0.46
COL4A5-201ENST00000328300 DCAF4L1Q3SXM0 396 aa12.2□□□□□ -0.46
COL4A5-201ENST00000328300 ZNF484Q5JVG2 852 aa12.2□□□□□ -0.46
COL4A5-201ENST00000328300 SCARA5Q6ZMJ2 495 aa12.2□□□□□ -0.46
COL4A5-201ENST00000328300 CDKL3Q8IVW4 592 aaPredicted RBP12.2□□□□□ -0.46
COL4A5-201ENST00000328300 PPP1R2P1Q96PQ5 205 aa12.2□□□□□ -0.46
COL4A5-201ENST00000328300 AGXT2Q9BYV1 514 aa12.2□□□□□ -0.46
COL4A5-201ENST00000328300 IQANK1A0A1B0GTG1 560 aa12.19□□□□□ -0.46
COL4A5-201ENST00000328300 COBLO75128 1261 aa12.19□□□□□ -0.46
COL4A5-201ENST00000328300 CHRNA3P32297 505 aa12.19□□□□□ -0.46
COL4A5-201ENST00000328300 RGS2P41220 211 aa12.19□□□□□ -0.46
COL4A5-201ENST00000328300 FCGRTP55899 365 aa12.19□□□□□ -0.46
COL4A5-201ENST00000328300 SYDE1Q6ZW31 735 aaPredicted RBP12.19□□□□□ -0.46
COL4A5-201ENST00000328300 VCX3BQ9H321 246 aa12.19□□□□□ -0.46
COL4A5-201ENST00000328300 FAM96AQ9H5X1 160 aa12.19□□□□□ -0.46
COL4A5-201ENST00000328300 EPB41L5Q9HCM4 733 aa12.19□□□□□ -0.46
COL4A5-201ENST00000328300 HSPBP1Q9NZL4 362 aa12.19□□□□□ -0.46
COL4A5-201ENST00000328300 ECE1P42892 770 aa12.19□□□□□ -0.46
COL4A5-201ENST00000328300 ITPRIPL1Q6GPH6 555 aa12.19□□□□□ -0.46
COL4A5-201ENST00000328300 PHLDB2Q86SQ0 1253 aa12.19□□□□□ -0.46
COL4A5-201ENST00000328300 SLITRK6Q9H5Y7 841 aa12.19□□□□□ -0.46
COL4A5-201ENST00000328300 PARVAQ9NVD7 372 aa12.19□□□□□ -0.46
COL4A5-201ENST00000328300 MYOM1P52179 1685 aa12.19□□□□□ -0.46
COL4A5-201ENST00000328300 FTCDO95954 541 aa12.19□□□□□ -0.46
COL4A5-201ENST00000328300 SREBF1P36956 1147 aa12.19□□□□□ -0.46
COL4A5-201ENST00000328300 ZNF131P52739 623 aa12.19□□□□□ -0.46
COL4A5-201ENST00000328300 BACE1P56817 501 aa12.19□□□□□ -0.46
COL4A5-201ENST00000328300 DGKDQ16760 1214 aa12.19□□□□□ -0.46
COL4A5-201ENST00000328300 NIPA1Q7RTP0 329 aa12.19□□□□□ -0.46
COL4A5-201ENST00000328300 RHOT1Q8IXI2 618 aa12.19□□□□□ -0.46
COL4A5-201ENST00000328300 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.19□□□□□ -0.46
COL4A5-201ENST00000328300 SYNJ2BP-COX16A0A087WUM0 186 aa12.19□□□□□ -0.46
COL4A5-201ENST00000328300 CXCL11O14625 94 aa12.19□□□□□ -0.46
COL4A5-201ENST00000328300 ALDH1A1P00352 501 aa12.19□□□□□ -0.46
COL4A5-201ENST00000328300 FDPSP14324 419 aaKnown RBP12.19□□□□□ -0.46
COL4A5-201ENST00000328300 C6orf118Q5T5N4 469 aa12.19□□□□□ -0.46
COL4A5-201ENST00000328300 COX16Q9P0S2 106 aa12.19□□□□□ -0.46
COL4A5-201ENST00000328300 ANAPC7Q9UJX3 599 aa12.19□□□□□ -0.46
COL4A5-201ENST00000328300 FMN2Q9NZ56 1722 aa12.19□□□□□ -0.46
COL4A5-201ENST00000328300 RTN2O75298 545 aa12.19□□□□□ -0.46
COL4A5-201ENST00000328300 PNPLA4P41247 253 aa12.19□□□□□ -0.46
COL4A5-201ENST00000328300 ARL4CP56559 192 aa12.19□□□□□ -0.46
COL4A5-201ENST00000328300 MYBPC2Q14324 1141 aa12.19□□□□□ -0.46
COL4A5-201ENST00000328300 RPS6KA2Q15349 733 aa12.19□□□□□ -0.46
COL4A5-201ENST00000328300 TSNAXIP1Q2TAA8 658 aa12.19□□□□□ -0.46
COL4A5-201ENST00000328300 DNERQ8NFT8 737 aa12.19□□□□□ -0.46
COL4A5-201ENST00000328300 ZC3H15Q8WU90 426 aaKnown RBP12.19□□□□□ -0.46
COL4A5-201ENST00000328300 GNGT1P63211 74 aa12.18□□□□□ -0.46
COL4A5-201ENST00000328300 ZNF564Q8TBZ8 553 aaPredicted RBP12.18□□□□□ -0.46
COL4A5-201ENST00000328300 SCYL1Q96KG9 808 aa12.18□□□□□ -0.46
COL4A5-201ENST00000328300 MAGEB5Q9BZ81 275 aa12.18□□□□□ -0.46
COL4A5-201ENST00000328300 ZBTB12Q9Y330 459 aaPredicted RBP12.18□□□□□ -0.46
COL4A5-201ENST00000328300 EMSYQ7Z589 1322 aa12.18□□□□□ -0.46
COL4A5-201ENST00000328300 ANKRD42Q8N9B4 389 aa12.18□□□□□ -0.46
COL4A5-201ENST00000328300 TMEM39BQ9GZU3 492 aa12.18□□□□□ -0.46
COL4A5-201ENST00000328300 CLGNO14967 610 aa12.18□□□□□ -0.46
COL4A5-201ENST00000328300 VPS41P49754 854 aa12.18□□□□□ -0.46
COL4A5-201ENST00000328300 RNF149Q8NC42 400 aa12.18□□□□□ -0.46
COL4A5-201ENST00000328300 EEF2KMTQ96G04 330 aa12.18□□□□□ -0.46
COL4A5-201ENST00000328300 PDLIM2Q96JY6 352 aa12.18□□□□□ -0.46
COL4A5-201ENST00000328300 ZBED2Q9BTP6 218 aa12.18□□□□□ -0.46
COL4A5-201ENST00000328300 M0QYV0 167 aa12.18□□□□□ -0.46
COL4A5-201ENST00000328300 SEC23AQ15436 765 aa12.18□□□□□ -0.46
COL4A5-201ENST00000328300 DNAAF3Q8N9W5 541 aa12.18□□□□□ -0.46
COL4A5-201ENST00000328300 PRPF31Q8WWY3 499 aaKnown RBP12.18□□□□□ -0.46
COL4A5-201ENST00000328300 RILPQ96NA2 401 aa12.18□□□□□ -0.46
COL4A5-201ENST00000328300 FMO2Q99518 471 aa12.18□□□□□ -0.46
COL4A5-201ENST00000328300 REEP2Q9BRK0 252 aa12.18□□□□□ -0.46
COL4A5-201ENST00000328300 PPP1R12CQ9BZL4 782 aa12.18□□□□□ -0.46
COL4A5-201ENST00000328300 KIAA1683Q9H0B3 1180 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms