RNA–Protein interactions for RNA: ENST00000326495.9

SSH1-202, Transcript of slingshot protein phosphatase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SSH1, Length 13,040 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-202ENST00000326495 CUL3Q13618 768 aa6.71□□□□□ -1.34
SSH1-202ENST00000326495 CNBD2Q96M20 576 aa6.71□□□□□ -1.34
SSH1-202ENST00000326495 SLC38A10Q9HBR0 1119 aa6.71□□□□□ -1.34
SSH1-202ENST00000326495 SH2B2O14492 632 aaPredicted RBP6.71□□□□□ -1.34
SSH1-202ENST00000326495 ADCY3O60266 1144 aa6.71□□□□□ -1.34
SSH1-202ENST00000326495 ADD1P35611 737 aaKnown RBP6.71□□□□□ -1.34
SSH1-202ENST00000326495 TRAPPC11Q7Z392 1133 aa6.71□□□□□ -1.34
SSH1-202ENST00000326495 TUBGCP3Q96CW5 907 aa6.71□□□□□ -1.34
SSH1-202ENST00000326495 PDLIM2Q96JY6 352 aa6.71□□□□□ -1.34
SSH1-202ENST00000326495 OSBPL1AQ9BXW6 950 aa6.71□□□□□ -1.34
SSH1-202ENST00000326495 ASNSD1Q9NWL6 643 aa6.71□□□□□ -1.34
SSH1-202ENST00000326495 MBD2Q9UBB5 411 aa6.71□□□□□ -1.34
SSH1-202ENST00000326495 APPL1Q9UKG1 709 aa6.71□□□□□ -1.34
SSH1-202ENST00000326495 PALD1Q9ULE6 856 aa6.71□□□□□ -1.34
SSH1-202ENST00000326495 CDY2AQ9Y6F7 541 aa6.71□□□□□ -1.34
SSH1-202ENST00000326495 CDY1Q9Y6F8 540 aa6.71□□□□□ -1.34
SSH1-202ENST00000326495 PNMA8CA0A1B0GUJ8 204 aa6.71□□□□□ -1.34
SSH1-202ENST00000326495 AREL1O15033 823 aa6.71□□□□□ -1.34
SSH1-202ENST00000326495 PRPF3O43395 683 aaKnown RBP6.71□□□□□ -1.34
SSH1-202ENST00000326495 KRT1P04264 644 aa6.71□□□□□ -1.34
SSH1-202ENST00000326495 DGKHQ86XP1 1220 aa6.71□□□□□ -1.34
SSH1-202ENST00000326495 PALB2Q86YC2 1186 aa6.71□□□□□ -1.34
SSH1-202ENST00000326495 MB21D1Q8N884 522 aa6.71□□□□□ -1.34
SSH1-202ENST00000326495 PHF21AQ96BD5 680 aa6.71□□□□□ -1.34
SSH1-202ENST00000326495 NEUROG2Q9H2A3 272 aa6.71□□□□□ -1.34
SSH1-202ENST00000326495 STMN3Q9NZ72 180 aa6.71□□□□□ -1.34
SSH1-202ENST00000326495 NUP214P35658 2090 aaPredicted RBP6.71□□□□□ -1.34
SSH1-202ENST00000326495 H0Y3Z8 333 aa6.71□□□□□ -1.34
SSH1-202ENST00000326495 PCCAP05165 728 aaPredicted RBP6.71□□□□□ -1.34
SSH1-202ENST00000326495 HNRNPCP07910 306 aaKnown RBP eCLIP6.71□□□□□ -1.34
SSH1-202ENST00000326495 RPL22P35268 128 aaKnown RBP6.71□□□□□ -1.34
SSH1-202ENST00000326495 MFSD14BQ5SR56 506 aa6.71□□□□□ -1.34
SSH1-202ENST00000326495 DYDC2Q96IM9 177 aa6.71□□□□□ -1.34
SSH1-202ENST00000326495 PLEKHA4Q9H4M7 779 aa6.71□□□□□ -1.34
SSH1-202ENST00000326495 CCNL1Q9UK58 526 aaPredicted RBP6.71□□□□□ -1.34
SSH1-202ENST00000326495 ITIH6Q6UXX5 1313 aa6.71□□□□□ -1.34
SSH1-202ENST00000326495 ZBED1O96006 694 aa6.71□□□□□ -1.34
SSH1-202ENST00000326495 EIF1ADQ8N9N8 165 aaKnown RBP6.71□□□□□ -1.34
SSH1-202ENST00000326495 STAMQ92783 540 aa6.71□□□□□ -1.34
SSH1-202ENST00000326495 MMADHCQ9H3L0 296 aaPredicted RBP6.71□□□□□ -1.34
SSH1-202ENST00000326495 SSU72P8A0A1W2PR75 194 aa6.71□□□□□ -1.34
SSH1-202ENST00000326495 IQCA1LA6NCM1 817 aa6.71□□□□□ -1.34
SSH1-202ENST00000326495 ITKQ08881 620 aa6.71□□□□□ -1.34
SSH1-202ENST00000326495 SPOPLQ6IQ16 392 aa6.71□□□□□ -1.34
SSH1-202ENST00000326495 MS4A14Q96JA4 679 aa6.71□□□□□ -1.34
SSH1-202ENST00000326495 PPARGC1AQ9UBK2 798 aaKnown RBP6.71□□□□□ -1.34
SSH1-202ENST00000326495 HPCAL4Q9UM19 191 aa6.71□□□□□ -1.34
SSH1-202ENST00000326495 TP53BP2Q13625 1128 aa6.71□□□□□ -1.34
SSH1-202ENST00000326495 NAA35Q5VZE5 725 aa6.71□□□□□ -1.34
SSH1-202ENST00000326495 C11orf88Q6PI97 169 aa6.71□□□□□ -1.34
SSH1-202ENST00000326495 C16orf89Q6UX73 402 aa6.71□□□□□ -1.34
SSH1-202ENST00000326495 PAGE5Q96GU1 130 aa6.71□□□□□ -1.34
SSH1-202ENST00000326495 XPO5Q9HAV4 1204 aaKnown RBP eCLIP6.71□□□□□ -1.34
SSH1-202ENST00000326495 FARP1Q9Y4F1 1045 aaPredicted RBP6.71□□□□□ -1.34
SSH1-202ENST00000326495 H0YIN7 160 aa6.7□□□□□ -1.34
SSH1-202ENST00000326495 DDX39AO00148 427 aaKnown RBP6.7□□□□□ -1.34
SSH1-202ENST00000326495 ZNF197O14709 1029 aa6.7□□□□□ -1.34
SSH1-202ENST00000326495 ACADSP16219 412 aa6.7□□□□□ -1.34
SSH1-202ENST00000326495 KLHL41O60662 606 aa6.7□□□□□ -1.34
SSH1-202ENST00000326495 SAT1P21673 171 aa6.7□□□□□ -1.34
SSH1-202ENST00000326495 SERPINB3P29508 390 aa6.7□□□□□ -1.34
SSH1-202ENST00000326495 CDC27P30260 824 aa6.7□□□□□ -1.34
SSH1-202ENST00000326495 PRKAA2P54646 552 aa6.7□□□□□ -1.34
SSH1-202ENST00000326495 SUPT20HL1Q3ZLR7 823 aa6.7□□□□□ -1.34
SSH1-202ENST00000326495 CLEC4GQ6UXB4 293 aa6.7□□□□□ -1.34
SSH1-202ENST00000326495 TBC1D1Q86TI0 1168 aaPredicted RBP6.7□□□□□ -1.34
SSH1-202ENST00000326495 NUDCD3Q8IVD9 361 aa6.7□□□□□ -1.34
SSH1-202ENST00000326495 MAGED4Q96JG8 741 aa6.7□□□□□ -1.34
SSH1-202ENST00000326495 PCDHGB4Q9UN71 923 aa6.7□□□□□ -1.34
SSH1-202ENST00000326495 CTIFO43310 598 aaKnown RBP6.7□□□□□ -1.34
SSH1-202ENST00000326495 LRRN2O75325 713 aa6.7□□□□□ -1.34
SSH1-202ENST00000326495 PALMO75781 387 aa6.7□□□□□ -1.34
SSH1-202ENST00000326495 BRAFP15056 766 aa6.7□□□□□ -1.34
SSH1-202ENST00000326495 DPP8Q6V1X1 898 aaPredicted RBP6.7□□□□□ -1.34
SSH1-202ENST00000326495 ZBTB12Q9Y330 459 aaPredicted RBP6.7□□□□□ -1.34
SSH1-202ENST00000326495 STARD13Q9Y3M8 1113 aa6.7□□□□□ -1.34
SSH1-202ENST00000326495 CLTCL1P53675 1640 aa6.7□□□□□ -1.34
SSH1-202ENST00000326495 PPLO60437 1756 aa6.7□□□□□ -1.34
SSH1-202ENST00000326495 SAC3D1A6NKF1 404 aa6.7□□□□□ -1.34
SSH1-202ENST00000326495 MRPL28Q13084 256 aaKnown RBP6.7□□□□□ -1.34
SSH1-202ENST00000326495 RESTQ13127 1097 aa6.7□□□□□ -1.34
SSH1-202ENST00000326495 KRT24Q2M2I5 525 aa6.7□□□□□ -1.34
SSH1-202ENST00000326495 PPP6R3Q5H9R7 873 aaPredicted RBP6.7□□□□□ -1.34
SSH1-202ENST00000326495 ZNF544Q6NX49 715 aa6.7□□□□□ -1.34
SSH1-202ENST00000326495 TRPC5Q9UL62 973 aaPredicted RBP6.7□□□□□ -1.34
SSH1-202ENST00000326495 KIAA0100Q14667 2235 aaKnown RBP6.7□□□□□ -1.34
SSH1-202ENST00000326495 A0A0G2JND7 137 aa6.7□□□□□ -1.34
SSH1-202ENST00000326495 SPDYE16A6NNV3 312 aaPredicted RBP6.7□□□□□ -1.34
SSH1-202ENST00000326495 EIF3HO15372 352 aaKnown RBP eCLIP6.7□□□□□ -1.34
SSH1-202ENST00000326495 CCDC159P0C7I6 412 aa6.7□□□□□ -1.34
SSH1-202ENST00000326495 PLCG1P19174 1290 aa6.7□□□□□ -1.34
SSH1-202ENST00000326495 CNTFP26441 200 aa6.7□□□□□ -1.34
SSH1-202ENST00000326495 SLC7A5Q01650 507 aa6.7□□□□□ -1.34
SSH1-202ENST00000326495 PKN2Q16513 984 aaKnown RBP6.7□□□□□ -1.34
SSH1-202ENST00000326495 SPDYE2Q495Y8 402 aa6.7□□□□□ -1.34
SSH1-202ENST00000326495 NCAPG2Q86XI2 1143 aa6.7□□□□□ -1.34
SSH1-202ENST00000326495 NIM1KQ8IY84 436 aa6.7□□□□□ -1.34
SSH1-202ENST00000326495 PDHA1P08559 390 aa6.7□□□□□ -1.34
SSH1-202ENST00000326495 ST13P50502 369 aaKnown RBP6.7□□□□□ -1.34
SSH1-202ENST00000326495 KIF19Q2TAC6 998 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms