RNA–Protein interactions for RNA: ENST00000324771.12

DDR1-223, Transcript of discoidin domain receptor tyrosine kinase 1, human

APPRIS ALT2 TSL 5 BASIC

Gene DDR1, Length 4,148 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDR1-223	ENST00000324771	GOLGA8M	H3BSY2	632 aa		12.7	□□□□□ -0.38
DDR1-223	ENST00000324771	LIG3	P49916	1009 aa		12.7	□□□□□ -0.38
DDR1-223	ENST00000324771	ACTR2	P61160	394 aa		12.7	□□□□□ -0.38
DDR1-223	ENST00000324771	NEDD9	Q14511	834 aa		12.7	□□□□□ -0.38
DDR1-223	ENST00000324771	TERF2	Q15554	542 aa		12.7	□□□□□ -0.38
DDR1-223	ENST00000324771	WDR72	Q3MJ13	1102 aa		12.7	□□□□□ -0.38
DDR1-223	ENST00000324771	PPP6R3	Q5H9R7	873 aa	Predicted RBP	12.7	□□□□□ -0.38
DDR1-223	ENST00000324771	ERICH1	Q86X53	443 aa		12.7	□□□□□ -0.38
DDR1-223	ENST00000324771	SH2D3C	Q8N5H7	860 aa		12.7	□□□□□ -0.38
DDR1-223	ENST00000324771	ANKS4B	Q8N8V4	417 aa		12.7	□□□□□ -0.38
DDR1-223	ENST00000324771	OR6B3	Q8NGW1	331 aa		12.7	□□□□□ -0.38
DDR1-223	ENST00000324771	NEK9	Q8TD19	979 aa		12.7	□□□□□ -0.38
DDR1-223	ENST00000324771	PBK	Q96KB5	322 aa		12.7	□□□□□ -0.38
DDR1-223	ENST00000324771	RIT2	Q99578	217 aa		12.7	□□□□□ -0.38
DDR1-223	ENST00000324771	PDCD2L	Q9BRP1	358 aa		12.7	□□□□□ -0.38
DDR1-223	ENST00000324771	ACP6	Q9NPH0	428 aa		12.7	□□□□□ -0.38
DDR1-223	ENST00000324771	MED4	Q9NPJ6	270 aa		12.7	□□□□□ -0.38
DDR1-223	ENST00000324771	PON1	P27169	355 aa		12.69	□□□□□ -0.38
DDR1-223	ENST00000324771	ORC1	Q13415	861 aa		12.69	□□□□□ -0.38
DDR1-223	ENST00000324771	SLC35G1	Q2M3R5	365 aa		12.69	□□□□□ -0.38
DDR1-223	ENST00000324771	ZNF667	Q5HYK9	610 aa		12.69	□□□□□ -0.38
DDR1-223	ENST00000324771	SH3BP5L	Q7L8J4	393 aa		12.69	□□□□□ -0.38
DDR1-223	ENST00000324771	TRIM50	Q86XT4	487 aa		12.69	□□□□□ -0.38
DDR1-223	ENST00000324771	RFX6	Q8HWS3	928 aa		12.69	□□□□□ -0.38
DDR1-223	ENST00000324771	SCYL3	Q8IZE3	742 aa		12.69	□□□□□ -0.38
DDR1-223	ENST00000324771	FMO2	Q99518	471 aa		12.69	□□□□□ -0.38
DDR1-223	ENST00000324771	AGPAT1	Q99943	283 aa		12.69	□□□□□ -0.38
DDR1-223	ENST00000324771	CELF4	Q9BZC1	486 aa	Known RBP	12.69	□□□□□ -0.38
DDR1-223	ENST00000324771	NOC2L	Q9Y3T9	749 aa	Known RBP	12.69	□□□□□ -0.38
DDR1-223	ENST00000324771	PASK	Q96RG2	1323 aa		12.69	□□□□□ -0.38
DDR1-223	ENST00000324771	KCP	Q6ZWJ8	1503 aa		12.69	□□□□□ -0.38
DDR1-223	ENST00000324771	CTIF	O43310	598 aa	Known RBP	12.69	□□□□□ -0.38
DDR1-223	ENST00000324771	FGR	P09769	529 aa		12.69	□□□□□ -0.38
DDR1-223	ENST00000324771	WEE2	P0C1S8	567 aa		12.69	□□□□□ -0.38
DDR1-223	ENST00000324771	HADH	Q16836	314 aa	Known RBP	12.69	□□□□□ -0.38
DDR1-223	ENST00000324771	ZNF699	Q32M78	642 aa		12.69	□□□□□ -0.38
DDR1-223	ENST00000324771	GPD1L	Q8N335	351 aa		12.69	□□□□□ -0.38
DDR1-223	ENST00000324771	SHISA4	Q96DD7	197 aa		12.69	□□□□□ -0.38
DDR1-223	ENST00000324771	THOC1	Q96FV9	657 aa	Known RBP	12.69	□□□□□ -0.38
DDR1-223	ENST00000324771	TRIM51	Q9BSJ1	452 aa		12.69	□□□□□ -0.38
DDR1-223	ENST00000324771	MOV10L1	Q9BXT6	1211 aa	Known RBP	12.69	□□□□□ -0.38
DDR1-223	ENST00000324771	BCAS3	Q9H6U6	928 aa		12.69	□□□□□ -0.38
DDR1-223	ENST00000324771	FEZ2	Q9UHY8	353 aa	Predicted RBP	12.69	□□□□□ -0.38
DDR1-223	ENST00000324771	PPP1R9A	Q9ULJ8	1098 aa		12.69	□□□□□ -0.38
DDR1-223	ENST00000324771	ABT1	Q9ULW3	272 aa	Known RBP	12.69	□□□□□ -0.38
DDR1-223	ENST00000324771	MAD1L1	Q9Y6D9	718 aa		12.69	□□□□□ -0.38
DDR1-223	ENST00000324771	PITPNM2	Q9BZ72	1349 aa		12.69	□□□□□ -0.38
DDR1-223	ENST00000324771	SART1	O43290	800 aa	Known RBP	12.69	□□□□□ -0.38
DDR1-223	ENST00000324771	DGAT1	O75907	488 aa		12.69	□□□□□ -0.38
DDR1-223	ENST00000324771	CALR	P27797	417 aa	Known RBP	12.69	□□□□□ -0.38
DDR1-223	ENST00000324771	KCNJ6	P48051	423 aa		12.69	□□□□□ -0.38
DDR1-223	ENST00000324771	RWDD2B	P57060	319 aa		12.69	□□□□□ -0.38
DDR1-223	ENST00000324771	TAF12	Q16514	161 aa		12.69	□□□□□ -0.38
DDR1-223	ENST00000324771	XKR3	Q5GH77	459 aa		12.69	□□□□□ -0.38
DDR1-223	ENST00000324771	PNMA8A	Q86V59	439 aa	Predicted RBP	12.69	□□□□□ -0.38
DDR1-223	ENST00000324771	PALM2	Q8IXS6	379 aa		12.69	□□□□□ -0.38
DDR1-223	ENST00000324771	NME8	Q8N427	588 aa		12.69	□□□□□ -0.38
DDR1-223	ENST00000324771	HSPH1	Q92598	858 aa		12.69	□□□□□ -0.38
DDR1-223	ENST00000324771	DHX38	Q92620	1227 aa	Known RBP	12.69	□□□□□ -0.38
DDR1-223	ENST00000324771	NSRP1	Q9H0G5	558 aa	Known RBP	12.69	□□□□□ -0.38
DDR1-223	ENST00000324771	TLR3	O15455	904 aa	Known RBP	12.69	□□□□□ -0.38
DDR1-223	ENST00000324771	ECEL1	O95672	775 aa		12.69	□□□□□ -0.38
DDR1-223	ENST00000324771	CALCA	P01258	141 aa		12.69	□□□□□ -0.38
DDR1-223	ENST00000324771	ATP2A2	P16615	1042 aa	Known RBP	12.69	□□□□□ -0.38
DDR1-223	ENST00000324771	GNA15	P30679	374 aa		12.69	□□□□□ -0.38
DDR1-223	ENST00000324771	CIITA	P33076	1130 aa		12.69	□□□□□ -0.38
DDR1-223	ENST00000324771	MXRA7	P84157	204 aa		12.69	□□□□□ -0.38
DDR1-223	ENST00000324771	MTMR3	Q13615	1198 aa		12.69	□□□□□ -0.38
DDR1-223	ENST00000324771	ALCAM	Q13740	583 aa		12.69	□□□□□ -0.38
DDR1-223	ENST00000324771	OTOP1	Q7RTM1	612 aa		12.69	□□□□□ -0.38
DDR1-223	ENST00000324771	APBB1IP	Q7Z5R6	666 aa	Predicted RBP	12.69	□□□□□ -0.38
DDR1-223	ENST00000324771	RNF10	Q8N5U6	811 aa	Known RBP	12.69	□□□□□ -0.38
DDR1-223	ENST00000324771	C4orf32	Q8N8J7	132 aa		12.69	□□□□□ -0.38
DDR1-223	ENST00000324771	POLR3C	Q9BUI4	534 aa	Predicted RBP	12.69	□□□□□ -0.38
DDR1-223	ENST00000324771	DMGDH	Q9UI17	866 aa	Known RBP	12.69	□□□□□ -0.38
DDR1-223	ENST00000324771	ADM5	C9JUS6	153 aa		12.68	□□□□□ -0.38
DDR1-223	ENST00000324771	CARS	P49589	748 aa	Known RBP	12.68	□□□□□ -0.38
DDR1-223	ENST00000324771	PPP2R5C	Q13362	524 aa		12.68	□□□□□ -0.38
DDR1-223	ENST00000324771	OR2W6P	Q8NHA6	318 aa		12.68	□□□□□ -0.38
DDR1-223	ENST00000324771	ANKRD7	Q92527	254 aa		12.68	□□□□□ -0.38
DDR1-223	ENST00000324771	SPC25	Q9HBM1	224 aa		12.68	□□□□□ -0.38
DDR1-223	ENST00000324771	SLC5A4	Q9NY91	659 aa		12.68	□□□□□ -0.38
DDR1-223	ENST00000324771	ODF2L	Q9ULJ1	636 aa		12.68	□□□□□ -0.38
DDR1-223	ENST00000324771	PLAA	Q9Y263	795 aa		12.68	□□□□□ -0.38
DDR1-223	ENST00000324771	FAM237A	A0A1B0GTK4	181 aa		12.68	□□□□□ -0.38
DDR1-223	ENST00000324771	BASP1	P80723	227 aa	Known RBP	12.68	□□□□□ -0.38
DDR1-223	ENST00000324771	EMC2	Q15006	297 aa		12.68	□□□□□ -0.38
DDR1-223	ENST00000324771	SLFN12L	Q6IEE8	588 aa		12.68	□□□□□ -0.38
DDR1-223	ENST00000324771	POTEA	Q6S8J7	498 aa		12.68	□□□□□ -0.38
DDR1-223	ENST00000324771	SLC17A8	Q8NDX2	589 aa		12.68	□□□□□ -0.38
DDR1-223	ENST00000324771	GMCL1P1	Q8NEA9	526 aa		12.68	□□□□□ -0.38
DDR1-223	ENST00000324771	MTMR8	Q96EF0	704 aa		12.68	□□□□□ -0.38
DDR1-223	ENST00000324771	AP5M1	Q9H0R1	490 aa		12.68	□□□□□ -0.38
DDR1-223	ENST00000324771	DNAJC18	Q9H819	358 aa		12.68	□□□□□ -0.38
DDR1-223	ENST00000324771	L2HGDH	Q9H9P8	463 aa		12.68	□□□□□ -0.38
DDR1-223	ENST00000324771	OSGEP	Q9NPF4	335 aa		12.68	□□□□□ -0.38
DDR1-223	ENST00000324771	ATRN	O75882	1429 aa		12.68	□□□□□ -0.38
DDR1-223	ENST00000324771	TTI1	O43156	1089 aa		12.68	□□□□□ -0.38
DDR1-223	ENST00000324771	DYNC1LI2	O43237	492 aa	Predicted RBP	12.68	□□□□□ -0.38
DDR1-223	ENST00000324771	ZRANB2	O95218	330 aa	Known RBP eCLIP	12.68	□□□□□ -0.38

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