RNA–Protein interactions for RNA: ENST00000324309.8

CCDC149-201, Transcript of coiled-coil domain containing 149, humanhuman

TSL 2

Gene CCDC149, Length 5,604 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC149-201ENST00000324309 ADGRA1Q86SQ6 560 aa13.72□□□□□ -0.21
CCDC149-201ENST00000324309 IFT81Q8WYA0 676 aa13.72□□□□□ -0.21
CCDC149-201ENST00000324309 HTATIP2Q9BUP3 242 aa13.72□□□□□ -0.21
CCDC149-201ENST00000324309 INTS2Q9H0H0 1204 aaKnown RBP13.72□□□□□ -0.21
CCDC149-201ENST00000324309 SAMD15Q9P1V8 674 aa13.72□□□□□ -0.21
CCDC149-201ENST00000324309 COL1A1P02452 1464 aaPredicted RBP13.72□□□□□ -0.21
CCDC149-201ENST00000324309 PDXDC1Q6P996 788 aa13.72□□□□□ -0.21
CCDC149-201ENST00000324309 CLEC10AQ8IUN9 316 aa13.72□□□□□ -0.21
CCDC149-201ENST00000324309 YAF2Q8IY57 180 aa13.72□□□□□ -0.21
CCDC149-201ENST00000324309 ATP8B4Q8TF62 1192 aa13.72□□□□□ -0.21
CCDC149-201ENST00000324309 ROBO3Q96MS0 1386 aa13.72□□□□□ -0.21
CCDC149-201ENST00000324309 APOEP02649 317 aa13.72□□□□□ -0.21
CCDC149-201ENST00000324309 CPB1P15086 417 aa13.72□□□□□ -0.21
CCDC149-201ENST00000324309 PGM5Q15124 567 aa13.72□□□□□ -0.21
CCDC149-201ENST00000324309 TATDN1Q6P1N9 297 aa13.72□□□□□ -0.21
CCDC149-201ENST00000324309 LRP10Q7Z4F1 713 aa13.72□□□□□ -0.21
CCDC149-201ENST00000324309 CCDC25Q86WR0 208 aa13.72□□□□□ -0.21
CCDC149-201ENST00000324309 P2RX7Q99572 595 aaKnown RBP13.72□□□□□ -0.21
CCDC149-201ENST00000324309 MRPL9Q9BYD2 267 aaKnown RBP13.72□□□□□ -0.21
CCDC149-201ENST00000324309 CCDC68Q9H2F9 335 aa13.72□□□□□ -0.21
CCDC149-201ENST00000324309 PPP2R2CQ9Y2T4 447 aa13.72□□□□□ -0.21
CCDC149-201ENST00000324309 KRT31Q15323 416 aa13.72□□□□□ -0.21
CCDC149-201ENST00000324309 SPATA2LQ8IUW3 424 aaPredicted RBP13.72□□□□□ -0.21
CCDC149-201ENST00000324309 DDX27Q96GQ7 796 aaKnown RBP13.72□□□□□ -0.21
CCDC149-201ENST00000324309 LSM7Q9UK45 103 aaKnown RBP13.72□□□□□ -0.21
CCDC149-201ENST00000324309 ALS2Q96Q42 1657 aa13.72□□□□□ -0.21
CCDC149-201ENST00000324309 ADKP55263 362 aaKnown RBP13.72□□□□□ -0.21
CCDC149-201ENST00000324309 DDX4Q9NQI0 724 aaKnown RBP13.72□□□□□ -0.21
CCDC149-201ENST00000324309 PFDN4Q9NQP4 134 aa13.72□□□□□ -0.21
CCDC149-201ENST00000324309 HSPBP1Q9NZL4 362 aa13.72□□□□□ -0.21
CCDC149-201ENST00000324309 TUBE1Q9UJT0 475 aa13.72□□□□□ -0.21
CCDC149-201ENST00000324309 PIK3CDO00329 1044 aa13.71□□□□□ -0.21
CCDC149-201ENST00000324309 CRCPO75575 148 aa13.71□□□□□ -0.21
CCDC149-201ENST00000324309 PARNO95453 639 aaKnown RBP13.71□□□□□ -0.21
CCDC149-201ENST00000324309 ADORA2AP29274 412 aa13.71□□□□□ -0.21
CCDC149-201ENST00000324309 CASP14P31944 242 aa13.71□□□□□ -0.21
CCDC149-201ENST00000324309 MAP2K5Q13163 448 aa13.71□□□□□ -0.21
CCDC149-201ENST00000324309 TSPAN18Q96SJ8 248 aa13.71□□□□□ -0.21
CCDC149-201ENST00000324309 SENP7Q9BQF6 1050 aa13.71□□□□□ -0.21
CCDC149-201ENST00000324309 UNC45AQ9H3U1 944 aa13.71□□□□□ -0.21
CCDC149-201ENST00000324309 FARP1Q9Y4F1 1045 aaPredicted RBP13.71□□□□□ -0.21
CCDC149-201ENST00000324309 MOCS3O95396 460 aa13.71□□□□□ -0.21
CCDC149-201ENST00000324309 ZFXP17010 805 aaPredicted RBP13.71□□□□□ -0.21
CCDC149-201ENST00000324309 CD58P19256 250 aa13.71□□□□□ -0.21
CCDC149-201ENST00000324309 RECQLP46063 649 aaPredicted RBP13.71□□□□□ -0.21
CCDC149-201ENST00000324309 KCNH2Q12809 1159 aa13.71□□□□□ -0.21
CCDC149-201ENST00000324309 GRAMD1CQ8IYS0 662 aa13.71□□□□□ -0.21
CCDC149-201ENST00000324309 STKLD1Q8NE28 680 aa13.71□□□□□ -0.21
CCDC149-201ENST00000324309 KLRG1Q96E93 195 aa13.71□□□□□ -0.21
CCDC149-201ENST00000324309 ZMYND15Q9H091 742 aa13.71□□□□□ -0.21
CCDC149-201ENST00000324309 NFASCO94856 1347 aa13.71□□□□□ -0.21
CCDC149-201ENST00000324309 SFI1A8K8P3 1242 aa13.71□□□□□ -0.21
CCDC149-201ENST00000324309 EGFRP00533 1210 aa13.71□□□□□ -0.21
CCDC149-201ENST00000324309 NT5DC4Q86YG4 428 aa13.71□□□□□ -0.21
CCDC149-201ENST00000324309 PPP1R2P1Q96PQ5 205 aa13.71□□□□□ -0.21
CCDC149-201ENST00000324309 TSPYL2Q9H2G4 693 aaPredicted RBP13.71□□□□□ -0.21
CCDC149-201ENST00000324309 FBXO28Q9NVF7 368 aa13.71□□□□□ -0.21
CCDC149-201ENST00000324309 DDX56Q9NY93 547 aaKnown RBP13.71□□□□□ -0.21
CCDC149-201ENST00000324309 HPCAL4Q9UM19 191 aa13.71□□□□□ -0.21
CCDC149-201ENST00000324309 A8MXQ7 604 aa13.71□□□□□ -0.22
CCDC149-201ENST00000324309 KRIT1O00522 736 aa13.71□□□□□ -0.22
CCDC149-201ENST00000324309 CLCN1P35523 988 aa13.71□□□□□ -0.22
CCDC149-201ENST00000324309 ITKQ08881 620 aa13.71□□□□□ -0.22
CCDC149-201ENST00000324309 FAM110CQ1W6H9 321 aa13.71□□□□□ -0.22
CCDC149-201ENST00000324309 TRIM7Q9C029 511 aa13.71□□□□□ -0.22
CCDC149-201ENST00000324309 ANAPC5Q9UJX4 755 aa13.71□□□□□ -0.22
CCDC149-201ENST00000324309 SETD1AO15047 1707 aaKnown RBP13.71□□□□□ -0.22
CCDC149-201ENST00000324309 NWD2Q9ULI1 1742 aa13.71□□□□□ -0.22
CCDC149-201ENST00000324309 H7C0C1 242 aa13.7□□□□□ -0.22
CCDC149-201ENST00000324309 KCNK3O14649 394 aa13.7□□□□□ -0.22
CCDC149-201ENST00000324309 GARTP22102 1010 aa13.7□□□□□ -0.22
CCDC149-201ENST00000324309 ATP5OP48047 213 aa13.7□□□□□ -0.22
CCDC149-201ENST00000324309 PLCB4Q15147 1175 aa13.7□□□□□ -0.22
CCDC149-201ENST00000324309 ZNF677Q86XU0 584 aa13.7□□□□□ -0.22
CCDC149-201ENST00000324309 ANKS4BQ8N8V4 417 aa13.7□□□□□ -0.22
CCDC149-201ENST00000324309 KRT1P04264 644 aa13.7□□□□□ -0.22
CCDC149-201ENST00000324309 ATF2P15336 505 aa13.7□□□□□ -0.22
CCDC149-201ENST00000324309 ACVR2BQ13705 512 aa13.7□□□□□ -0.22
CCDC149-201ENST00000324309 ARHGAP15Q53QZ3 475 aa13.7□□□□□ -0.22
CCDC149-201ENST00000324309 CFAP157Q5JU67 520 aa13.7□□□□□ -0.22
CCDC149-201ENST00000324309 XPNPEP3Q9NQH7 507 aa13.7□□□□□ -0.22
CCDC149-201ENST00000324309 KIAA1257Q9ULG3 409 aa13.7□□□□□ -0.22
CCDC149-201ENST00000324309 TRIM17Q9Y577 477 aa13.7□□□□□ -0.22
CCDC149-201ENST00000324309 EFCAB14O75071 495 aa13.7□□□□□ -0.22
CCDC149-201ENST00000324309 PRCPP42785 496 aa13.7□□□□□ -0.22
CCDC149-201ENST00000324309 RNASE9P60153 205 aaKnown RBP13.7□□□□□ -0.22
CCDC149-201ENST00000324309 RGL1Q9NZL6 768 aa13.7□□□□□ -0.22
CCDC149-201ENST00000324309 CYBBP04839 570 aa13.7□□□□□ -0.22
CCDC149-201ENST00000324309 ODC1P11926 461 aa13.7□□□□□ -0.22
CCDC149-201ENST00000324309 KPNA2P52292 529 aaKnown RBP13.7□□□□□ -0.22
CCDC149-201ENST00000324309 PLD1Q13393 1074 aa13.7□□□□□ -0.22
CCDC149-201ENST00000324309 PTF1AQ7RTS3 328 aa13.7□□□□□ -0.22
CCDC149-201ENST00000324309 CERS5Q8N5B7 392 aa13.7□□□□□ -0.22
CCDC149-201ENST00000324309 UBLCP1Q8WVY7 318 aaPredicted RBP13.7□□□□□ -0.22
CCDC149-201ENST00000324309 PPM1EQ8WY54 764 aa13.7□□□□□ -0.22
CCDC149-201ENST00000324309 REEP2Q9BRK0 252 aa13.7□□□□□ -0.22
CCDC149-201ENST00000324309 ZCCHC17Q9NP64 241 aaKnown RBP13.7□□□□□ -0.22
CCDC149-201ENST00000324309 FAM217BQ9NTX9 383 aaPredicted RBP13.7□□□□□ -0.22
CCDC149-201ENST00000324309 SHC4Q6S5L8 630 aa13.7□□□□□ -0.22
CCDC149-201ENST00000324309 LRRC8AQ8IWT6 810 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 99.2 ms