RNA–Protein interactions for RNA: ENST00000323224.7

TYMS-201, Transcript of thymidylate synthetase, humanhuman

TSL 1 (best) BASIC

Gene TYMS, Length 1,327 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TYMS-201ENST00000323224 RNF39Q9H2S5 420 aa20.87■□□□□ 0.93
TYMS-201ENST00000323224 FOXP1Q9H334 677 aaPredicted RBP20.87■□□□□ 0.93
TYMS-201ENST00000323224 C2orf71A6NGG8 1288 aa20.86■□□□□ 0.93
TYMS-201ENST00000323224 ASAP2O43150 1006 aa20.86■□□□□ 0.93
TYMS-201ENST00000323224 B4GALT5O43286 388 aa20.86■□□□□ 0.93
TYMS-201ENST00000323224 DGAT1O75907 488 aa20.86■□□□□ 0.93
TYMS-201ENST00000323224 DDHD2O94830 711 aa20.86■□□□□ 0.93
TYMS-201ENST00000323224 GALTP07902 379 aa20.86■□□□□ 0.93
TYMS-201ENST00000323224 SKIP12755 728 aa20.86■□□□□ 0.93
TYMS-201ENST00000323224 SLC11A1P49279 550 aa20.86■□□□□ 0.93
TYMS-201ENST00000323224 MBTD1Q05BQ5 628 aa20.86■□□□□ 0.93
TYMS-201ENST00000323224 AMHR2Q16671 573 aa20.86■□□□□ 0.93
TYMS-201ENST00000323224 POTEGQ6S5H5 508 aa20.86■□□□□ 0.93
TYMS-201ENST00000323224 MRPL10Q7Z7H8 261 aaKnown RBP20.86■□□□□ 0.93
TYMS-201ENST00000323224 POLR3FQ9H1D9 316 aaPredicted RBP20.86■□□□□ 0.93
TYMS-201ENST00000323224 INO80B-WBP1J3KQ70 363 aa20.85■□□□□ 0.93
TYMS-201ENST00000323224 GPR37L1O60883 481 aa20.85■□□□□ 0.93
TYMS-201ENST00000323224 ERLIN2O94905 339 aa20.85■□□□□ 0.93
TYMS-201ENST00000323224 OR52Z1P0C646 297 aa20.85■□□□□ 0.93
TYMS-201ENST00000323224 RBM25P49756 843 aaKnown RBP20.85■□□□□ 0.93
TYMS-201ENST00000323224 HMGN5P82970 282 aaKnown RBP20.85■□□□□ 0.93
TYMS-201ENST00000323224 RNASELQ05823 741 aaKnown RBP20.85■□□□□ 0.93
TYMS-201ENST00000323224 MXD4Q14582 209 aaPredicted RBP20.85■□□□□ 0.93
TYMS-201ENST00000323224 TTC38Q5R3I4 469 aa20.85■□□□□ 0.93
TYMS-201ENST00000323224 SYCE2Q6PIF2 218 aa20.85■□□□□ 0.93
TYMS-201ENST00000323224 CDR2LQ86X02 465 aaPredicted RBP20.85■□□□□ 0.93
TYMS-201ENST00000323224 NOSTRINQ8IVI9 506 aa20.85■□□□□ 0.93
TYMS-201ENST00000323224 VPS52Q8N1B4 723 aa20.85■□□□□ 0.93
TYMS-201ENST00000323224 MRPL43Q8N983 215 aaKnown RBP20.85■□□□□ 0.93
TYMS-201ENST00000323224 TMEM169Q96HH4 297 aa20.85■□□□□ 0.93
TYMS-201ENST00000323224 CCDC43Q96MW1 224 aaKnown RBP20.85■□□□□ 0.93
TYMS-201ENST00000323224 CDCA3Q99618 268 aaPredicted RBP20.85■□□□□ 0.93
TYMS-201ENST00000323224 RSAD1Q9HA92 442 aa20.85■□□□□ 0.93
TYMS-201ENST00000323224 NGRNQ9NPE2 291 aaKnown RBP20.85■□□□□ 0.93
TYMS-201ENST00000323224 SH2B1Q9NRF2 756 aaPredicted RBP20.85■□□□□ 0.93
TYMS-201ENST00000323224 HES2Q9Y543 173 aa20.85■□□□□ 0.93
TYMS-201ENST00000323224 CD2BP2O95400 341 aaKnown RBP20.84■□□□□ 0.93
TYMS-201ENST00000323224 CA8P35219 290 aa20.84■□□□□ 0.93
TYMS-201ENST00000323224 IFNLR1Q8IU57 520 aaPredicted RBP20.84■□□□□ 0.93
TYMS-201ENST00000323224 C4orf32Q8N8J7 132 aa20.84■□□□□ 0.93
TYMS-201ENST00000323224 FAM184AQ8NB25 1140 aa20.84■□□□□ 0.93
TYMS-201ENST00000323224 PGBD4Q96DM1 585 aa20.84■□□□□ 0.93
TYMS-201ENST00000323224 IGSF21Q96ID5 467 aa20.84■□□□□ 0.93
TYMS-201ENST00000323224 ZBP1Q9H171 429 aa20.84■□□□□ 0.93
TYMS-201ENST00000323224 S1PR5Q9H228 398 aa20.84■□□□□ 0.93
TYMS-201ENST00000323224 TUFT1Q9NNX1 390 aa20.84■□□□□ 0.93
TYMS-201ENST00000323224 MUTYHQ9UIF7 546 aa20.84■□□□□ 0.93
TYMS-201ENST00000323224 IPPQ9Y573 584 aa20.84■□□□□ 0.93
TYMS-201ENST00000323224 TDRD15B5MCY1 1934 aaKnown RBP20.83■□□□□ 0.93
TYMS-201ENST00000323224 DCXO43602 365 aa20.83■□□□□ 0.93
TYMS-201ENST00000323224 CXCL14O95715 111 aa20.83■□□□□ 0.93
TYMS-201ENST00000323224 POMCP01189 267 aa20.83■□□□□ 0.93
TYMS-201ENST00000323224 ARF4P18085 180 aaPredicted RBP20.83■□□□□ 0.93
TYMS-201ENST00000323224 TOB1P50616 345 aaPredicted RBP20.83■□□□□ 0.93
TYMS-201ENST00000323224 TFDP1Q14186 410 aa20.83■□□□□ 0.93
TYMS-201ENST00000323224 SMC1AQ14683 1233 aaKnown RBP20.83■□□□□ 0.93
TYMS-201ENST00000323224 ECM1Q16610 540 aa20.83■□□□□ 0.93
TYMS-201ENST00000323224 ANKRD54Q6NXT1 300 aa20.83■□□□□ 0.93
TYMS-201ENST00000323224 TMEM184AQ6ZMB5 413 aa20.83■□□□□ 0.93
TYMS-201ENST00000323224 RNF135Q8IUD6 432 aa20.83■□□□□ 0.93
TYMS-201ENST00000323224 FEZF2Q8TBJ5 459 aa20.83■□□□□ 0.93
TYMS-201ENST00000323224 SUSD6Q92537 303 aa20.83■□□□□ 0.93
TYMS-201ENST00000323224 POLD4Q9HCU8 107 aa20.83■□□□□ 0.93
TYMS-201ENST00000323224 TTLL13PA6NNM8 815 aa20.82■□□□□ 0.92
TYMS-201ENST00000323224 CLASP2O75122 1294 aaKnown RBP20.82■□□□□ 0.92
TYMS-201ENST00000323224 NCLP19338 710 aaKnown RBP20.82■□□□□ 0.92
TYMS-201ENST00000323224 BSNDQ8WZ55 320 aa20.82■□□□□ 0.92
TYMS-201ENST00000323224 POP1Q99575 1024 aaKnown RBP20.82■□□□□ 0.92
TYMS-201ENST00000323224 POLR3CQ9BUI4 534 aaPredicted RBP20.82■□□□□ 0.92
TYMS-201ENST00000323224 APOL6Q9BWW8 343 aa20.82■□□□□ 0.92
TYMS-201ENST00000323224 NXF3Q9H4D5 531 aaKnown RBP20.82■□□□□ 0.92
TYMS-201ENST00000323224 MIOSQ9NXC5 875 aa20.82■□□□□ 0.92
TYMS-201ENST00000323224 HCFC2Q9Y5Z7 792 aa20.82■□□□□ 0.92
TYMS-201ENST00000323224 TECTAO75443 2155 aa20.81■□□□□ 0.92
TYMS-201ENST00000323224 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP20.81■□□□□ 0.92
TYMS-201ENST00000323224 LRRIQ4A6NIV6 560 aa20.81■□□□□ 0.92
TYMS-201ENST00000323224 F8W810 466 aa20.81■□□□□ 0.92
TYMS-201ENST00000323224 XRCC6P12956 609 aaKnown RBP eCLIP20.81■□□□□ 0.92
TYMS-201ENST00000323224 ITGA4P13612 1032 aa20.81■□□□□ 0.92
TYMS-201ENST00000323224 ALADP13716 330 aa20.81■□□□□ 0.92
TYMS-201ENST00000323224 MLH1P40692 756 aa20.81■□□□□ 0.92
TYMS-201ENST00000323224 GNL2Q13823 731 aaKnown RBP20.81■□□□□ 0.92
TYMS-201ENST00000323224 KANK3Q6NY19 840 aa20.81■□□□□ 0.92
TYMS-201ENST00000323224 DDX53Q86TM3 631 aaKnown RBP20.81■□□□□ 0.92
TYMS-201ENST00000323224 URGCPQ8TCY9 931 aa20.81■□□□□ 0.92
TYMS-201ENST00000323224 ZFP42Q96MM3 310 aa20.81■□□□□ 0.92
TYMS-201ENST00000323224 GAD1Q99259 594 aa20.81■□□□□ 0.92
TYMS-201ENST00000323224 CSRNP2Q9H175 543 aa20.81■□□□□ 0.92
TYMS-201ENST00000323224 USP20Q9Y2K6 914 aa20.81■□□□□ 0.92
TYMS-201ENST00000323224 PCDHB6Q9Y5E3 794 aa20.81■□□□□ 0.92
TYMS-201ENST00000323224 CNTNAP2Q9UHC6 1331 aa20.81■□□□□ 0.92
TYMS-201ENST00000323224 LOC730098B7Z3J9 87 aa20.8■□□□□ 0.92
TYMS-201ENST00000323224 U2AF2P26368 475 aaKnown RBP eCLIP20.8■□□□□ 0.929e-8■■■□□ 16.5
TYMS-201ENST00000323224 RPA1P27694 616 aa20.8■□□□□ 0.92
TYMS-201ENST00000323224 POU5F1BQ06416 359 aa20.8■□□□□ 0.92
TYMS-201ENST00000323224 NOTUMQ6P988 496 aa20.8■□□□□ 0.92
TYMS-201ENST00000323224 RPGRIP1Q96KN7 1286 aa20.8■□□□□ 0.92
TYMS-201ENST00000323224 NACC1Q96RE7 527 aa20.8■□□□□ 0.92
TYMS-201ENST00000323224 DBR1Q9UK59 544 aaKnown RBP20.8■□□□□ 0.92
TYMS-201ENST00000323224 ARL5CA6NH57 179 aa20.79■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms