RNA–Protein interactions for RNA: ENST00000323022.9

CACNA1F-201, Transcript of calcium voltage-gated channel subunit alpha1 F, humanhuman

TSL 1 (best) BASIC

Gene CACNA1F, Length 6,037 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1F-201ENST00000323022 SSH2Q76I76 1423 aa13.14□□□□□ -0.31
CACNA1F-201ENST00000323022 SH2B2O14492 632 aaPredicted RBP13.14□□□□□ -0.31
CACNA1F-201ENST00000323022 AVPR1AP37288 418 aa13.14□□□□□ -0.31
CACNA1F-201ENST00000323022 HARS2P49590 506 aaKnown RBP13.14□□□□□ -0.31
CACNA1F-201ENST00000323022 LAMC2Q13753 1193 aa13.14□□□□□ -0.31
CACNA1F-201ENST00000323022 IMPG1Q17R60 797 aa13.14□□□□□ -0.31
CACNA1F-201ENST00000323022 MUM1Q2TAK8 710 aa13.14□□□□□ -0.31
CACNA1F-201ENST00000323022 EFHC2Q5JST6 749 aa13.14□□□□□ -0.31
CACNA1F-201ENST00000323022 ANKS3Q6ZW76 656 aa13.14□□□□□ -0.31
CACNA1F-201ENST00000323022 PCGF5Q86SE9 256 aa13.14□□□□□ -0.31
CACNA1F-201ENST00000323022 FAM133AQ8N9E0 248 aa13.14□□□□□ -0.31
CACNA1F-201ENST00000323022 RBAKQ9NYW8 714 aaPredicted RBP13.14□□□□□ -0.31
CACNA1F-201ENST00000323022 KLHL14Q9P2G3 628 aa13.14□□□□□ -0.31
CACNA1F-201ENST00000323022 HOXA2O43364 376 aa13.14□□□□□ -0.31
CACNA1F-201ENST00000323022 GCLMP48507 274 aa13.14□□□□□ -0.31
CACNA1F-201ENST00000323022 CDK17Q00537 523 aa13.14□□□□□ -0.31
CACNA1F-201ENST00000323022 DHX38Q92620 1227 aaKnown RBP13.14□□□□□ -0.31
CACNA1F-201ENST00000323022 Q9H521 79 aa13.14□□□□□ -0.31
CACNA1F-201ENST00000323022 TYW1Q9NV66 732 aaKnown RBP13.14□□□□□ -0.31
CACNA1F-201ENST00000323022 THG1LQ9NWX6 298 aaKnown RBP13.14□□□□□ -0.31
CACNA1F-201ENST00000323022 DBR1Q9UK59 544 aaKnown RBP13.14□□□□□ -0.31
CACNA1F-201ENST00000323022 H0Y626 953 aa13.14□□□□□ -0.31
CACNA1F-201ENST00000323022 NDUFS2O75306 463 aa13.14□□□□□ -0.31
CACNA1F-201ENST00000323022 BAG2O95816 211 aa13.14□□□□□ -0.31
CACNA1F-201ENST00000323022 YWHABP31946 246 aaKnown RBP13.14□□□□□ -0.31
CACNA1F-201ENST00000323022 BCAR1P56945 870 aa13.14□□□□□ -0.31
CACNA1F-201ENST00000323022 TDRD10Q5VZ19 366 aaKnown RBP13.14□□□□□ -0.31
CACNA1F-201ENST00000323022 EMILIN2Q9BXX0 1053 aa13.14□□□□□ -0.31
CACNA1F-201ENST00000323022 SLC38A7Q9NVC3 462 aa13.14□□□□□ -0.31
CACNA1F-201ENST00000323022 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.14□□□□□ -0.31
CACNA1F-201ENST00000323022 CYP2C8P10632 490 aa13.13□□□□□ -0.31
CACNA1F-201ENST00000323022 NT5DC4Q86YG4 428 aa13.13□□□□□ -0.31
CACNA1F-201ENST00000323022 EFHBQ8N7U6 833 aa13.13□□□□□ -0.31
CACNA1F-201ENST00000323022 CHST13Q8NET6 341 aa13.13□□□□□ -0.31
CACNA1F-201ENST00000323022 DDX41Q9UJV9 622 aaKnown RBP13.13□□□□□ -0.31
CACNA1F-201ENST00000323022 TRPM1Q7Z4N2 1603 aa13.13□□□□□ -0.31
CACNA1F-201ENST00000323022 PRPF3O43395 683 aaKnown RBP13.13□□□□□ -0.31
CACNA1F-201ENST00000323022 NLRP11P59045 1033 aaKnown RBP13.13□□□□□ -0.31
CACNA1F-201ENST00000323022 CDH18Q13634 790 aa13.13□□□□□ -0.31
CACNA1F-201ENST00000323022 KLC3Q6P597 504 aa13.13□□□□□ -0.31
CACNA1F-201ENST00000323022 MIR1-1HGQ9H1L0 117 aa13.13□□□□□ -0.31
CACNA1F-201ENST00000323022 IMPACTQ9P2X3 320 aa13.13□□□□□ -0.31
CACNA1F-201ENST00000323022 H7C4K7 107 aa13.13□□□□□ -0.31
CACNA1F-201ENST00000323022 TMEM132DQ14C87 1099 aa13.13□□□□□ -0.31
CACNA1F-201ENST00000323022 PCSK1NQ9UHG2 260 aa13.13□□□□□ -0.31
CACNA1F-201ENST00000323022 FBXO10Q9UK96 956 aa13.13□□□□□ -0.31
CACNA1F-201ENST00000323022 SRPRBQ9Y5M8 271 aaKnown RBP13.13□□□□□ -0.31
CACNA1F-201ENST00000323022 E9PMD0 336 aa13.13□□□□□ -0.31
CACNA1F-201ENST00000323022 ENTPD3O75355 529 aa13.13□□□□□ -0.31
CACNA1F-201ENST00000323022 NR3C2P08235 984 aa13.13□□□□□ -0.31
CACNA1F-201ENST00000323022 SULT1E1P49888 294 aa13.13□□□□□ -0.31
CACNA1F-201ENST00000323022 MKRN4PQ13434 485 aaPredicted RBP13.13□□□□□ -0.31
CACNA1F-201ENST00000323022 CYP4F22Q6NT55 531 aa13.13□□□□□ -0.31
CACNA1F-201ENST00000323022 C11orf96Q7Z7L8 435 aa13.13□□□□□ -0.31
CACNA1F-201ENST00000323022 RBM23Q86U06 439 aaKnown RBP13.13□□□□□ -0.31
CACNA1F-201ENST00000323022 DGKHQ86XP1 1220 aa13.13□□□□□ -0.31
CACNA1F-201ENST00000323022 GRAMD1CQ8IYS0 662 aa13.13□□□□□ -0.31
CACNA1F-201ENST00000323022 HS6ST3Q8IZP7 471 aa13.13□□□□□ -0.31
CACNA1F-201ENST00000323022 GBP5Q96PP8 586 aa13.13□□□□□ -0.31
CACNA1F-201ENST00000323022 USP28Q96RU2 1077 aa13.13□□□□□ -0.31
CACNA1F-201ENST00000323022 ABCC12Q96J65 1359 aa13.13□□□□□ -0.31
CACNA1F-201ENST00000323022 C1orf167Q5SNV9 1468 aa13.12□□□□□ -0.31
CACNA1F-201ENST00000323022 TMCC1O94876 653 aa13.12□□□□□ -0.31
CACNA1F-201ENST00000323022 TWF1Q12792 350 aa13.12□□□□□ -0.31
CACNA1F-201ENST00000323022 PHKG1Q16816 387 aa13.12□□□□□ -0.31
CACNA1F-201ENST00000323022 BZW1Q7L1Q6 419 aaKnown RBP13.12□□□□□ -0.31
CACNA1F-201ENST00000323022 SFR1Q86XK3 245 aa13.12□□□□□ -0.31
CACNA1F-201ENST00000323022 AGBL1Q96MI9 1066 aa13.12□□□□□ -0.31
CACNA1F-201ENST00000323022 CIPCQ9C0C6 399 aa13.12□□□□□ -0.31
CACNA1F-201ENST00000323022 SUFUQ9UMX1 484 aa13.12□□□□□ -0.31
CACNA1F-201ENST00000323022 CPSF1Q10570 1443 aaKnown RBP13.12□□□□□ -0.31
CACNA1F-201ENST00000323022 PTPRMP28827 1452 aa13.12□□□□□ -0.31
CACNA1F-201ENST00000323022 RRN3P2A6NIE6 340 aa13.12□□□□□ -0.31
CACNA1F-201ENST00000323022 HNRNPCL2B2RXH8 293 aa13.12□□□□□ -0.31
CACNA1F-201ENST00000323022 EIF3CLB5ME19 914 aaKnown RBP13.12□□□□□ -0.31
CACNA1F-201ENST00000323022 HNRNPCL1O60812 293 aaKnown RBP13.12□□□□□ -0.31
CACNA1F-201ENST00000323022 SDC4P31431 198 aa13.12□□□□□ -0.31
CACNA1F-201ENST00000323022 PAPOLAP51003 745 aaKnown RBP13.12□□□□□ -0.31
CACNA1F-201ENST00000323022 NOGQ13253 232 aa13.12□□□□□ -0.31
CACNA1F-201ENST00000323022 SLMAPQ14BN4 828 aa13.12□□□□□ -0.31
CACNA1F-201ENST00000323022 SLITRK1Q96PX8 696 aa13.12□□□□□ -0.31
CACNA1F-201ENST00000323022 EIF3CQ99613 913 aaKnown RBP13.12□□□□□ -0.31
CACNA1F-201ENST00000323022 CENPKQ9BS16 269 aa13.12□□□□□ -0.31
CACNA1F-201ENST00000323022 FOXP1Q9H334 677 aaPredicted RBP13.12□□□□□ -0.31
CACNA1F-201ENST00000323022 CERS4Q9HA82 394 aa13.12□□□□□ -0.31
CACNA1F-201ENST00000323022 BCL2L12Q9HB09 334 aa13.12□□□□□ -0.31
CACNA1F-201ENST00000323022 FAN1Q9Y2M0 1017 aa13.12□□□□□ -0.31
CACNA1F-201ENST00000323022 SYNGAP1Q96PV0 1343 aa13.12□□□□□ -0.31
CACNA1F-201ENST00000323022 CAMSAP1Q5T5Y3 1602 aa13.12□□□□□ -0.31
CACNA1F-201ENST00000323022 GOLGA8QA0A0J9YX86 632 aa13.12□□□□□ -0.31
CACNA1F-201ENST00000323022 GOLGA8OA6NCC3 632 aa13.12□□□□□ -0.31
CACNA1F-201ENST00000323022 GOLGA8NF8WBI6 632 aa13.12□□□□□ -0.31
CACNA1F-201ENST00000323022 GSPT1P15170 499 aaKnown RBP13.12□□□□□ -0.31
CACNA1F-201ENST00000323022 MAP4P27816 1152 aaKnown RBP13.12□□□□□ -0.31
CACNA1F-201ENST00000323022 CTNNB1P35222 781 aa13.12□□□□□ -0.31
CACNA1F-201ENST00000323022 USP50Q70EL3 339 aaPredicted RBP13.12□□□□□ -0.31
CACNA1F-201ENST00000323022 BBOF1Q8ND07 529 aa13.12□□□□□ -0.31
CACNA1F-201ENST00000323022 AKAP7Q9P0M2 348 aaPredicted RBP13.12□□□□□ -0.31
CACNA1F-201ENST00000323022 C6orf203Q9P0P8 240 aaPredicted RBP13.12□□□□□ -0.31
CACNA1F-201ENST00000323022 USP42Q9H9J4 1324 aaKnown RBP13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms