RNA–Protein interactions for RNA: ENST00000321331.11

HIGD1A-201, Transcript of HIG1 hypoxia inducible domain family member 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HIGD1A, Length 1,373 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIGD1A-201ENST00000321331 PEX3P56589 373 aa21.91■■□□□ 1.1
HIGD1A-201ENST00000321331 FAM187BQ17R55 369 aa21.91■■□□□ 1.1
HIGD1A-201ENST00000321331 USP49Q70CQ1 688 aa21.91■■□□□ 1.1
HIGD1A-201ENST00000321331 RAD54LQ92698 747 aa21.91■■□□□ 1.1
HIGD1A-201ENST00000321331 MRPL9Q9BYD2 267 aaKnown RBP21.91■■□□□ 1.1
HIGD1A-201ENST00000321331 FZD8Q9H461 694 aa21.91■■□□□ 1.1
HIGD1A-201ENST00000321331 AAASQ9NRG9 546 aa21.91■■□□□ 1.1
HIGD1A-201ENST00000321331 RNF19AQ9NV58 838 aa21.91■■□□□ 1.1
HIGD1A-201ENST00000321331 DAXXQ9UER7 740 aaPredicted RBP21.91■■□□□ 1.1
HIGD1A-201ENST00000321331 CFAP45Q9UL16 551 aa21.91■■□□□ 1.1
HIGD1A-201ENST00000321331 MTCH2Q9Y6C9 303 aa21.91■■□□□ 1.1
HIGD1A-201ENST00000321331 COL6A3P12111 3177 aa21.91■■□□□ 1.1
HIGD1A-201ENST00000321331 RAD51AP2Q09MP3 1159 aa21.9■■□□□ 1.1
HIGD1A-201ENST00000321331 PTPROQ16827 1216 aa21.9■■□□□ 1.1
HIGD1A-201ENST00000321331 UBXN11Q5T124 520 aa21.9■■□□□ 1.1
HIGD1A-201ENST00000321331 DAW1Q8N136 415 aa21.9■■□□□ 1.1
HIGD1A-201ENST00000321331 LRRC43Q8N309 656 aa21.9■■□□□ 1.1
HIGD1A-201ENST00000321331 HELQQ8TDG4 1101 aa21.9■■□□□ 1.1
HIGD1A-201ENST00000321331 LARP4BQ92615 738 aaKnown RBP21.9■■□□□ 1.1
HIGD1A-201ENST00000321331 CASD1Q96PB1 797 aa21.9■■□□□ 1.1
HIGD1A-201ENST00000321331 TRIM6Q9C030 488 aaPredicted RBP21.9■■□□□ 1.1
HIGD1A-201ENST00000321331 BLOC1S4Q9NUP1 217 aa21.9■■□□□ 1.1
HIGD1A-201ENST00000321331 PHLPP2Q6ZVD8 1323 aa21.9■■□□□ 1.1
HIGD1A-201ENST00000321331 CNTNAP2Q9UHC6 1331 aa21.9■■□□□ 1.1
HIGD1A-201ENST00000321331 CCDC169A6NNP5 214 aa21.89■■□□□ 1.1
HIGD1A-201ENST00000321331 B4GALT5O43286 388 aa21.89■■□□□ 1.1
HIGD1A-201ENST00000321331 BRD1O95696 1058 aa21.89■■□□□ 1.1
HIGD1A-201ENST00000321331 PRKCBP05771 671 aa21.89■■□□□ 1.1
HIGD1A-201ENST00000321331 DDIT3P35638 169 aa21.89■■□□□ 1.1
HIGD1A-201ENST00000321331 MAPK7Q13164 816 aa21.89■■□□□ 1.1
HIGD1A-201ENST00000321331 PRPF4BQ13523 1007 aaKnown RBP21.89■■□□□ 1.1
HIGD1A-201ENST00000321331 DHX8Q14562 1220 aaKnown RBP21.89■■□□□ 1.1
HIGD1A-201ENST00000321331 TMEM132AQ24JP5 1023 aa21.89■■□□□ 1.1
HIGD1A-201ENST00000321331 NAALADL2Q58DX5 795 aa21.89■■□□□ 1.1
HIGD1A-201ENST00000321331 CLLU1OSQ5K130 101 aa21.89■■□□□ 1.1
HIGD1A-201ENST00000321331 RRAGBQ5VZM2 374 aa21.89■■□□□ 1.1
HIGD1A-201ENST00000321331 GLB1LQ6UWU2 654 aa21.89■■□□□ 1.1
HIGD1A-201ENST00000321331 MRPL10Q7Z7H8 261 aaKnown RBP21.89■■□□□ 1.1
HIGD1A-201ENST00000321331 GPBP1Q86WP2 473 aa21.89■■□□□ 1.1
HIGD1A-201ENST00000321331 MICALL1Q8N3F8 863 aa21.89■■□□□ 1.1
HIGD1A-201ENST00000321331 KCNG4Q8TDN1 519 aa21.89■■□□□ 1.1
HIGD1A-201ENST00000321331 PPM1EQ8WY54 764 aa21.89■■□□□ 1.1
HIGD1A-201ENST00000321331 LPPQ93052 612 aa21.89■■□□□ 1.1
HIGD1A-201ENST00000321331 P2RX5Q93086 422 aa21.89■■□□□ 1.1
HIGD1A-201ENST00000321331 KIFC3Q9BVG8 833 aa21.89■■□□□ 1.1
HIGD1A-201ENST00000321331 KMT5AQ9NQR1 393 aa21.89■■□□□ 1.1
HIGD1A-201ENST00000321331 TYW1Q9NV66 732 aaKnown RBP21.89■■□□□ 1.1
HIGD1A-201ENST00000321331 STK17AQ9UEE5 414 aa21.89■■□□□ 1.1
HIGD1A-201ENST00000321331 PCDHB12Q9Y5F1 795 aa21.89■■□□□ 1.1
HIGD1A-201ENST00000321331 A0A1B0GUA9 196 aa21.88■■□□□ 1.09
HIGD1A-201ENST00000321331 ACKR2O00590 384 aa21.88■■□□□ 1.09
HIGD1A-201ENST00000321331 LIG1P18858 919 aa21.88■■□□□ 1.09
HIGD1A-201ENST00000321331 NPTX2P47972 431 aa21.88■■□□□ 1.09
HIGD1A-201ENST00000321331 SMTNP53814 917 aa21.88■■□□□ 1.09
HIGD1A-201ENST00000321331 MCM6Q14566 821 aa21.88■■□□□ 1.09
HIGD1A-201ENST00000321331 LONRF3Q496Y0 759 aa21.88■■□□□ 1.09
HIGD1A-201ENST00000321331 SLC27A1Q6PCB7 646 aa21.88■■□□□ 1.09
HIGD1A-201ENST00000321331 CCDC73Q6ZRK6 1079 aa21.88■■□□□ 1.09
HIGD1A-201ENST00000321331 HACE1Q8IYU2 909 aa21.88■■□□□ 1.09
HIGD1A-201ENST00000321331 LRRC15Q8TF66 581 aa21.88■■□□□ 1.09
HIGD1A-201ENST00000321331 CCDC113Q9H0I3 377 aa21.88■■□□□ 1.09
HIGD1A-201ENST00000321331 UBN1Q9NPG3 1134 aa21.88■■□□□ 1.09
HIGD1A-201ENST00000321331 ODF2LQ9ULJ1 636 aa21.88■■□□□ 1.09
HIGD1A-201ENST00000321331 RBM19Q9Y4C8 960 aaKnown RBP21.88■■□□□ 1.09
HIGD1A-201ENST00000321331 SFI1A8K8P3 1242 aa21.87■■□□□ 1.09
HIGD1A-201ENST00000321331 K7ERI5 159 aa21.87■■□□□ 1.09
HIGD1A-201ENST00000321331 N4BP3O15049 544 aa21.87■■□□□ 1.09
HIGD1A-201ENST00000321331 KRT18P05783 430 aaKnown RBP21.87■■□□□ 1.09
HIGD1A-201ENST00000321331 ITGA4P13612 1032 aa21.87■■□□□ 1.09
HIGD1A-201ENST00000321331 PLS3P13797 630 aa21.87■■□□□ 1.09
HIGD1A-201ENST00000321331 LAG3P18627 525 aa21.87■■□□□ 1.09
HIGD1A-201ENST00000321331 NCLP19338 710 aaKnown RBP21.87■■□□□ 1.09
HIGD1A-201ENST00000321331 CSPP1Q1MSJ5 1256 aa21.87■■□□□ 1.09
HIGD1A-201ENST00000321331 ARSHQ5FYA8 562 aa21.87■■□□□ 1.09
HIGD1A-201ENST00000321331 EIF2AQ9BY44 585 aaKnown RBP21.87■■□□□ 1.09
HIGD1A-201ENST00000321331 RSAD1Q9HA92 442 aa21.87■■□□□ 1.09
HIGD1A-201ENST00000321331 LARSQ9P2J5 1176 aaKnown RBP21.87■■□□□ 1.09
HIGD1A-201ENST00000321331 IPPQ9Y573 584 aa21.87■■□□□ 1.09
HIGD1A-201ENST00000321331 KIAA1671Q9BY89 1806 aa21.87■■□□□ 1.09
HIGD1A-201ENST00000321331 CUTAO60888 179 aa21.87■■□□□ 1.09
HIGD1A-201ENST00000321331 DNM1Q05193 864 aaKnown RBP21.87■■□□□ 1.09
HIGD1A-201ENST00000321331 CCDC85BQ15834 202 aaPredicted RBP21.87■■□□□ 1.09
HIGD1A-201ENST00000321331 LRRC55Q6ZSA7 311 aa21.87■■□□□ 1.09
HIGD1A-201ENST00000321331 SMG8Q8ND04 991 aaKnown RBP21.87■■□□□ 1.09
HIGD1A-201ENST00000321331 URGCPQ8TCY9 931 aa21.87■■□□□ 1.09
HIGD1A-201ENST00000321331 SPIRE2Q8WWL2 714 aa21.87■■□□□ 1.09
HIGD1A-201ENST00000321331 MRPL38Q96DV4 380 aaKnown RBP21.87■■□□□ 1.09
HIGD1A-201ENST00000321331 ADPGKQ9BRR6 497 aa21.87■■□□□ 1.09
HIGD1A-201ENST00000321331 LMAN2LQ9H0V9 348 aa21.87■■□□□ 1.09
HIGD1A-201ENST00000321331 CWH43Q9H720 699 aa21.87■■□□□ 1.09
HIGD1A-201ENST00000321331 INPP5FQ9Y2H2 1132 aa21.87■■□□□ 1.09
HIGD1A-201ENST00000321331 ATP6V1DQ9Y5K8 247 aa21.87■■□□□ 1.09
HIGD1A-201ENST00000321331 PRRC2BQ5JSZ5 2229 aaKnown RBP21.86■■□□□ 1.09
HIGD1A-201ENST00000321331 NPHP3-ACAD11A0A0J9YXS1 232 aa21.86■■□□□ 1.09
HIGD1A-201ENST00000321331 MEIS3P2A8K0S8 358 aa21.86■■□□□ 1.09
HIGD1A-201ENST00000321331 OFD1O75665 1012 aa21.86■■□□□ 1.09
HIGD1A-201ENST00000321331 NPTXRO95502 500 aa21.86■■□□□ 1.09
HIGD1A-201ENST00000321331 CACNB1Q02641 598 aaPredicted RBP21.86■■□□□ 1.09
HIGD1A-201ENST00000321331 NOMO2Q5JPE7 1267 aa21.86■■□□□ 1.09
HIGD1A-201ENST00000321331 AGMOQ6ZNB7 445 aa21.86■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms