RNA–Protein interactions for RNA: ENST00000318007.9

PDLIM5-202, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 1,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-202ENST00000318007 CCDC85CA6NKD9 419 aa16.89■□□□□ 0.29
PDLIM5-202ENST00000318007 ERLIN2O94905 339 aa16.89■□□□□ 0.29
PDLIM5-202ENST00000318007 CKBP12277 381 aa16.89■□□□□ 0.29
PDLIM5-202ENST00000318007 CCNE1P24864 410 aa16.89■□□□□ 0.29
PDLIM5-202ENST00000318007 MYL5Q02045 173 aa16.89■□□□□ 0.29
PDLIM5-202ENST00000318007 NFX1Q12986 1120 aaKnown RBP16.89■□□□□ 0.29
PDLIM5-202ENST00000318007 SNX17Q15036 470 aa16.89■□□□□ 0.29
PDLIM5-202ENST00000318007 IQCB1Q15051 598 aa16.89■□□□□ 0.29
PDLIM5-202ENST00000318007 CSGALNACT2Q8N6G5 542 aa16.89■□□□□ 0.29
PDLIM5-202ENST00000318007 DHTKD1Q96HY7 919 aaPredicted RBP16.89■□□□□ 0.29
PDLIM5-202ENST00000318007 CELF4Q9BZC1 486 aaKnown RBP16.89■□□□□ 0.29
PDLIM5-202ENST00000318007 GCOM2Q9BZD3 368 aaPredicted RBP16.89■□□□□ 0.29
PDLIM5-202ENST00000318007 CCDC113Q9H0I3 377 aa16.89■□□□□ 0.29
PDLIM5-202ENST00000318007 RWDD2AQ9UIY3 292 aa16.89■□□□□ 0.29
PDLIM5-202ENST00000318007 GOLGA8IPA6NC78 632 aa16.88■□□□□ 0.29
PDLIM5-202ENST00000318007 GOLGA8JA6NMD2 632 aa16.88■□□□□ 0.29
PDLIM5-202ENST00000318007 GOLGA6L19H0YKK7 550 aa16.88■□□□□ 0.29
PDLIM5-202ENST00000318007 KIF20AO95235 890 aa16.88■□□□□ 0.29
PDLIM5-202ENST00000318007 EIF4BP23588 611 aaKnown RBP16.88■□□□□ 0.29
PDLIM5-202ENST00000318007 NR2F2P24468 414 aa16.88■□□□□ 0.29
PDLIM5-202ENST00000318007 PTPN11Q06124 597 aaPredicted RBP16.88■□□□□ 0.29
PDLIM5-202ENST00000318007 PRPF4BQ13523 1007 aaKnown RBP16.88■□□□□ 0.29
PDLIM5-202ENST00000318007 CEP135Q66GS9 1140 aa16.88■□□□□ 0.29
PDLIM5-202ENST00000318007 TTI2Q6NXR4 508 aa16.88■□□□□ 0.29
PDLIM5-202ENST00000318007 SLC39A4Q6P5W5 647 aa16.88■□□□□ 0.29
PDLIM5-202ENST00000318007 CATSPER4Q7RTX7 472 aa16.88■□□□□ 0.29
PDLIM5-202ENST00000318007 SAAL1Q96ER3 474 aa16.88■□□□□ 0.29
PDLIM5-202ENST00000318007 TCHPQ9BT92 498 aa16.88■□□□□ 0.29
PDLIM5-202ENST00000318007 SRRTQ9BXP5 876 aaKnown RBP16.88■□□□□ 0.29
PDLIM5-202ENST00000318007 C2orf40Q9H1Z8 148 aa16.88■□□□□ 0.29
PDLIM5-202ENST00000318007 AGPAT3Q9NRZ7 376 aa16.88■□□□□ 0.29
PDLIM5-202ENST00000318007 ATP1A3P13637 1013 aa16.88■□□□□ 0.29
PDLIM5-202ENST00000318007 DARSP14868 501 aaKnown RBP16.88■□□□□ 0.29
PDLIM5-202ENST00000318007 CCL23P55773 120 aa16.88■□□□□ 0.29
PDLIM5-202ENST00000318007 OSTNP61366 133 aa16.88■□□□□ 0.29
PDLIM5-202ENST00000318007 FAAP100Q0VG06 881 aa16.88■□□□□ 0.29
PDLIM5-202ENST00000318007 NCAPHQ15003 741 aa16.88■□□□□ 0.29
PDLIM5-202ENST00000318007 BMT2Q1RMZ1 405 aa16.88■□□□□ 0.29
PDLIM5-202ENST00000318007 CENPPQ6IPU0 288 aa16.88■□□□□ 0.29
PDLIM5-202ENST00000318007 ARMCX5Q6P1M9 558 aa16.88■□□□□ 0.29
PDLIM5-202ENST00000318007 HS2ST1Q7LGA3 356 aa16.88■□□□□ 0.29
PDLIM5-202ENST00000318007 ZNF410Q86VK4 478 aa16.88■□□□□ 0.29
PDLIM5-202ENST00000318007 ANKLE1Q8NAG6 615 aa16.88■□□□□ 0.29
PDLIM5-202ENST00000318007 SCLYQ96I15 445 aa16.88■□□□□ 0.29
PDLIM5-202ENST00000318007 TSG101Q99816 390 aa16.88■□□□□ 0.29
PDLIM5-202ENST00000318007 DUSP9Q99956 384 aaKnown RBP16.88■□□□□ 0.29
PDLIM5-202ENST00000318007 TMEM206Q9H813 350 aa16.88■□□□□ 0.29
PDLIM5-202ENST00000318007 TYW1Q9NV66 732 aaKnown RBP16.88■□□□□ 0.29
PDLIM5-202ENST00000318007 NOC2LQ9Y3T9 749 aaKnown RBP16.88■□□□□ 0.29
PDLIM5-202ENST00000318007 TRPV2Q9Y5S1 764 aa16.88■□□□□ 0.29
PDLIM5-202ENST00000318007 RANBP2P49792 3224 aaKnown RBP16.87■□□□□ 0.29
PDLIM5-202ENST00000318007 DCDC2CA8MYV0 355 aa16.87■□□□□ 0.29
PDLIM5-202ENST00000318007 ERCC5P28715 1186 aaPredicted RBP16.87■□□□□ 0.29
PDLIM5-202ENST00000318007 EFNA5P52803 228 aa16.87■□□□□ 0.29
PDLIM5-202ENST00000318007 GSE1Q14687 1217 aa16.87■□□□□ 0.29
PDLIM5-202ENST00000318007 SLC17A8Q8NDX2 589 aa16.87■□□□□ 0.29
PDLIM5-202ENST00000318007 POMGNT1Q8WZA1 660 aa16.87■□□□□ 0.29
PDLIM5-202ENST00000318007 ST6GALNAC4Q9H4F1 302 aa16.87■□□□□ 0.29
PDLIM5-202ENST00000318007 PIN4Q9Y237 131 aaKnown RBP16.87■□□□□ 0.29
PDLIM5-202ENST00000318007 SIP14410 1827 aa16.87■□□□□ 0.29
PDLIM5-202ENST00000318007 BICDL2A1A5D9 508 aa16.86■□□□□ 0.29
PDLIM5-202ENST00000318007 H0YCG3 227 aa16.86■□□□□ 0.29
PDLIM5-202ENST00000318007 CD4P01730 458 aa16.86■□□□□ 0.29
PDLIM5-202ENST00000318007 NR3C1P04150 777 aa16.86■□□□□ 0.29
PDLIM5-202ENST00000318007 ARF4P18085 180 aaPredicted RBP16.86■□□□□ 0.29
PDLIM5-202ENST00000318007 ADSSP30520 456 aa16.86■□□□□ 0.29
PDLIM5-202ENST00000318007 CASP4P49662 377 aa16.86■□□□□ 0.29
PDLIM5-202ENST00000318007 CRYBB1P53674 252 aaPredicted RBP16.86■□□□□ 0.29
PDLIM5-202ENST00000318007 ADAM9Q13443 819 aa16.86■□□□□ 0.29
PDLIM5-202ENST00000318007 ALCAMQ13740 583 aa16.86■□□□□ 0.29
PDLIM5-202ENST00000318007 TRIM71Q2Q1W2 868 aaKnown RBP16.86■□□□□ 0.29
PDLIM5-202ENST00000318007 ZCWPW2Q504Y3 356 aa16.86■□□□□ 0.29
PDLIM5-202ENST00000318007 NME8Q8N427 588 aa16.86■□□□□ 0.29
PDLIM5-202ENST00000318007 ABHD8Q96I13 439 aa16.86■□□□□ 0.29
PDLIM5-202ENST00000318007 MRPL4Q9BYD3 311 aaKnown RBP16.86■□□□□ 0.29
PDLIM5-202ENST00000318007 HAPLN2Q9GZV7 340 aa16.86■□□□□ 0.29
PDLIM5-202ENST00000318007 HIPK3Q9H422 1215 aa16.86■□□□□ 0.29
PDLIM5-202ENST00000318007 AGO3Q9H9G7 860 aaKnown RBP16.86■□□□□ 0.29
PDLIM5-202ENST00000318007 EXOC7Q9UPT5 735 aa16.86■□□□□ 0.29
PDLIM5-202ENST00000318007 MROH7Q68CQ1 1323 aa16.86■□□□□ 0.29
PDLIM5-202ENST00000318007 LAMA3Q16787 3333 aa16.86■□□□□ 0.29
PDLIM5-202ENST00000318007 GOLGA6L3A6NEY3 463 aa16.86■□□□□ 0.29
PDLIM5-202ENST00000318007 TLR3O15455 904 aaKnown RBP16.86■□□□□ 0.29
PDLIM5-202ENST00000318007 CALUO43852 315 aaPredicted RBP16.86■□□□□ 0.29
PDLIM5-202ENST00000318007 TSPAN1O60635 241 aa16.86■□□□□ 0.29
PDLIM5-202ENST00000318007 RPS6KA5O75582 802 aa16.86■□□□□ 0.29
PDLIM5-202ENST00000318007 CD52P31358 61 aa16.86■□□□□ 0.29
PDLIM5-202ENST00000318007 COBLL1Q53SF7 1204 aa16.86■□□□□ 0.29
PDLIM5-202ENST00000318007 ATF7IP2Q5U623 682 aa16.86■□□□□ 0.29
PDLIM5-202ENST00000318007 EEF1DP3Q658K8 133 aa16.86■□□□□ 0.29
PDLIM5-202ENST00000318007 FAM228AQ86W67 206 aa16.86■□□□□ 0.29
PDLIM5-202ENST00000318007 FZD8Q9H461 694 aa16.86■□□□□ 0.29
PDLIM5-202ENST00000318007 TMEM134Q9H6X4 195 aa16.86■□□□□ 0.29
PDLIM5-202ENST00000318007 ACKR2O00590 384 aa16.85■□□□□ 0.29
PDLIM5-202ENST00000318007 PDXKO00764 312 aa16.85■□□□□ 0.29
PDLIM5-202ENST00000318007 CYP2C18P33260 490 aa16.85■□□□□ 0.29
PDLIM5-202ENST00000318007 MGAT3Q09327 533 aa16.85■□□□□ 0.29
PDLIM5-202ENST00000318007 AMHR2Q16671 573 aa16.85■□□□□ 0.29
PDLIM5-202ENST00000318007 PTPN21Q16825 1174 aa16.85■□□□□ 0.29
PDLIM5-202ENST00000318007 ZNF568Q3ZCX4 644 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms