RNA–Protein interactions for RNA: ENST00000317571.7

TTC39C-202, Transcript of tetratricopeptide repeat domain 39C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TTC39C, Length 2,442 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39C-202ENST00000317571 AGPAT1Q99943 283 aa22.33■■□□□ 1.17
TTC39C-202ENST00000317571 DDX47Q9H0S4 455 aaKnown RBP22.33■■□□□ 1.17
TTC39C-202ENST00000317571 ACP6Q9NPH0 428 aa22.33■■□□□ 1.17
TTC39C-202ENST00000317571 BHMG1C9JSJ3 638 aaPredicted RBP22.32■■□□□ 1.16
TTC39C-202ENST00000317571 PGRMC1O00264 195 aaKnown RBP22.32■■□□□ 1.16
TTC39C-202ENST00000317571 TNFAIP3P21580 790 aa22.32■■□□□ 1.16
TTC39C-202ENST00000317571 RPS12P25398 132 aaKnown RBP22.32■■□□□ 1.16
TTC39C-202ENST00000317571 NPTX2P47972 431 aa22.32■■□□□ 1.16
TTC39C-202ENST00000317571 GUCY2FP51841 1108 aa22.32■■□□□ 1.16
TTC39C-202ENST00000317571 TNNC1P63316 161 aa22.32■■□□□ 1.16
TTC39C-202ENST00000317571 KRT76Q01546 638 aa22.32■■□□□ 1.16
TTC39C-202ENST00000317571 SCYL3Q8IZE3 742 aa22.32■■□□□ 1.16
TTC39C-202ENST00000317571 SAMD3Q8N6K7 520 aa22.32■■□□□ 1.16
TTC39C-202ENST00000317571 ELMO3Q96BJ8 720 aa22.32■■□□□ 1.16
TTC39C-202ENST00000317571 ARL8AQ96BM9 186 aa22.32■■□□□ 1.16
TTC39C-202ENST00000317571 CCDC43Q96MW1 224 aaKnown RBP22.32■■□□□ 1.16
TTC39C-202ENST00000317571 SEPT11Q9NVA2 429 aaKnown RBP22.32■■□□□ 1.16
TTC39C-202ENST00000317571 ZNF214Q9UL59 606 aaPredicted RBP22.32■■□□□ 1.16
TTC39C-202ENST00000317571 NR2E1Q9Y466 385 aa22.32■■□□□ 1.16
TTC39C-202ENST00000317571 GJA3Q9Y6H8 435 aa22.32■■□□□ 1.16
TTC39C-202ENST00000317571 ADGRA3Q8IWK6 1321 aa22.32■■□□□ 1.16
TTC39C-202ENST00000317571 NR3C2P08235 984 aa22.32■■□□□ 1.16
TTC39C-202ENST00000317571 PTPRAP18433 802 aa22.32■■□□□ 1.16
TTC39C-202ENST00000317571 NNTQ13423 1086 aa22.32■■□□□ 1.16
TTC39C-202ENST00000317571 TTMPQ5BVD1 217 aa22.32■■□□□ 1.16
TTC39C-202ENST00000317571 KREMEN1Q96MU8 473 aa22.32■■□□□ 1.16
TTC39C-202ENST00000317571 MOV10L1Q9BXT6 1211 aaKnown RBP22.32■■□□□ 1.16
TTC39C-202ENST00000317571 ANKEF1Q9NU02 776 aa22.32■■□□□ 1.16
TTC39C-202ENST00000317571 CTDP1Q9Y5B0 961 aaPredicted RBP22.32■■□□□ 1.16
TTC39C-202ENST00000317571 LCTP09848 1927 aa22.32■■□□□ 1.16
TTC39C-202ENST00000317571 SFNP31947 248 aa22.31■■□□□ 1.16
TTC39C-202ENST00000317571 HMGCS2P54868 508 aa22.31■■□□□ 1.16
TTC39C-202ENST00000317571 PAK2Q13177 524 aa22.31■■□□□ 1.16
TTC39C-202ENST00000317571 SNRNP48Q6IEG0 339 aaKnown RBP22.31■■□□□ 1.16
TTC39C-202ENST00000317571 FOXR1Q6PIV2 292 aa22.31■■□□□ 1.16
TTC39C-202ENST00000317571 LEKR1Q6ZMV7 388 aa22.31■■□□□ 1.16
TTC39C-202ENST00000317571 PCDHB18PQ96TA0 734 aa22.31■■□□□ 1.16
TTC39C-202ENST00000317571 POP1Q99575 1024 aaKnown RBP22.31■■□□□ 1.16
TTC39C-202ENST00000317571 ZNF112Q9UJU3 913 aa22.31■■□□□ 1.16
TTC39C-202ENST00000317571 TBX20Q9UMR3 447 aa22.31■■□□□ 1.16
TTC39C-202ENST00000317571 KCNA2P16389 499 aa22.31■■□□□ 1.16
TTC39C-202ENST00000317571 RFX1P22670 979 aa22.31■■□□□ 1.16
TTC39C-202ENST00000317571 ZNF746Q6NUN9 644 aaPredicted RBP22.31■■□□□ 1.16
TTC39C-202ENST00000317571 DDX42Q86XP3 938 aaKnown RBP eCLIP22.31■■□□□ 1.16
TTC39C-202ENST00000317571 LMBR1Q8WVP7 490 aa22.31■■□□□ 1.16
TTC39C-202ENST00000317571 CTNNBL1Q8WYA6 563 aaPredicted RBP22.31■■□□□ 1.16
TTC39C-202ENST00000317571 FAM84AQ96KN4 292 aa22.31■■□□□ 1.16
TTC39C-202ENST00000317571 NEUROG2Q9H2A3 272 aa22.31■■□□□ 1.16
TTC39C-202ENST00000317571 TOPORSQ9NS56 1045 aaPredicted RBP22.31■■□□□ 1.16
TTC39C-202ENST00000317571 ZNFX1Q9P2E3 1918 aaKnown RBP22.3■■□□□ 1.16
TTC39C-202ENST00000317571 CCDC169A6NNP5 214 aa22.3■■□□□ 1.16
TTC39C-202ENST00000317571 P4HA2O15460 535 aa22.3■■□□□ 1.16
TTC39C-202ENST00000317571 SART1O43290 800 aaKnown RBP22.3■■□□□ 1.16
TTC39C-202ENST00000317571 CHRNB2P17787 502 aa22.3■■□□□ 1.16
TTC39C-202ENST00000317571 MXI1P50539 228 aa22.3■■□□□ 1.16
TTC39C-202ENST00000317571 MCCD1P59942 119 aaPredicted RBP22.3■■□□□ 1.16
TTC39C-202ENST00000317571 MAP4K3Q8IVH8 894 aa22.3■■□□□ 1.16
TTC39C-202ENST00000317571 SYCE1Q8N0S2 351 aa22.3■■□□□ 1.16
TTC39C-202ENST00000317571 IQCKQ8N0W5 287 aa22.3■■□□□ 1.16
TTC39C-202ENST00000317571 WRNIP1Q96S55 665 aa22.3■■□□□ 1.16
TTC39C-202ENST00000317571 TIPINQ9BVW5 301 aa22.3■■□□□ 1.16
TTC39C-202ENST00000317571 GABBR1Q9UBS5 961 aa22.3■■□□□ 1.16
TTC39C-202ENST00000317571 CHORDC1Q9UHD1 332 aaPredicted RBP22.3■■□□□ 1.16
TTC39C-202ENST00000317571 AMFRQ9UKV5 643 aa22.3■■□□□ 1.16
TTC39C-202ENST00000317571 MAPK13O15264 365 aa22.3■■□□□ 1.16
TTC39C-202ENST00000317571 SORBS3O60504 671 aa22.3■■□□□ 1.16
TTC39C-202ENST00000317571 MAP2K1Q02750 393 aaPredicted RBP22.3■■□□□ 1.16
TTC39C-202ENST00000317571 TMEM132BQ14DG7 1078 aa22.3■■□□□ 1.16
TTC39C-202ENST00000317571 SNRNP35Q16560 246 aaKnown RBP22.3■■□□□ 1.16
TTC39C-202ENST00000317571 ZNF280CQ8ND82 737 aa22.3■■□□□ 1.16
TTC39C-202ENST00000317571 CALR3Q96L12 384 aaKnown RBP22.3■■□□□ 1.16
TTC39C-202ENST00000317571 CWC15Q9P013 229 aaKnown RBP22.3■■□□□ 1.16
TTC39C-202ENST00000317571 DAAM1Q9Y4D1 1078 aa22.3■■□□□ 1.16
TTC39C-202ENST00000317571 ANKRD62A6NC57 917 aa22.29■■□□□ 1.16
TTC39C-202ENST00000317571 SGPL1O95470 568 aa22.29■■□□□ 1.16
TTC39C-202ENST00000317571 LRRC31Q6UY01 552 aa22.29■■□□□ 1.16
TTC39C-202ENST00000317571 NOCTQ9UK39 431 aaKnown RBP22.29■■□□□ 1.16
TTC39C-202ENST00000317571 ADAMTS5Q9UNA0 930 aa22.29■■□□□ 1.16
TTC39C-202ENST00000317571 PCDHA10Q9Y5I2 948 aa22.29■■□□□ 1.16
TTC39C-202ENST00000317571 DENND3A2RUS2 1198 aa22.29■■□□□ 1.16
TTC39C-202ENST00000317571 GOLGA6CA6NDK9 693 aa22.29■■□□□ 1.16
TTC39C-202ENST00000317571 GOLGA6DP0CG33 693 aa22.29■■□□□ 1.16
TTC39C-202ENST00000317571 CNGA1P29973 690 aa22.29■■□□□ 1.16
TTC39C-202ENST00000317571 CCND2P30279 289 aa22.29■■□□□ 1.16
TTC39C-202ENST00000317571 NOP9Q86U38 636 aaKnown RBP22.29■■□□□ 1.16
TTC39C-202ENST00000317571 RPUSD2Q8IZ73 545 aaKnown RBP22.29■■□□□ 1.16
TTC39C-202ENST00000317571 CCDC127Q96BQ5 260 aa22.29■■□□□ 1.16
TTC39C-202ENST00000317571 XPNPEP1Q9NQW7 623 aa22.29■■□□□ 1.16
TTC39C-202ENST00000317571 GOLGA6AQ9NYA3 693 aa22.29■■□□□ 1.16
TTC39C-202ENST00000317571 PPP1R1BQ9UD71 204 aaPredicted RBP22.29■■□□□ 1.16
TTC39C-202ENST00000317571 ZNF233A6NK53 670 aa22.28■■□□□ 1.16
TTC39C-202ENST00000317571 KRIT1O00522 736 aa22.28■■□□□ 1.16
TTC39C-202ENST00000317571 KRT14P02533 472 aa22.28■■□□□ 1.16
TTC39C-202ENST00000317571 CCDC172P0C7W6 258 aa22.28■■□□□ 1.16
TTC39C-202ENST00000317571 ALS2CLQ60I27 953 aa22.28■■□□□ 1.16
TTC39C-202ENST00000317571 MREGQ8N565 214 aa22.28■■□□□ 1.16
TTC39C-202ENST00000317571 EPS8L1Q8TE68 723 aa22.28■■□□□ 1.16
TTC39C-202ENST00000317571 ALG3Q92685 438 aa22.28■■□□□ 1.16
TTC39C-202ENST00000317571 GPRASP2Q96D09 838 aa22.28■■□□□ 1.16
TTC39C-202ENST00000317571 SENP7Q9BQF6 1050 aa22.28■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms