RNA–Protein interactions for RNA: ENST00000316707.10

PTPN13-201, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 7,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-201ENST00000316707 RPTORQ8N122 1335 aa5.12□□□□□ -1.59
PTPN13-201ENST00000316707 PNMA6FA0A0J9YX94 578 aa5.12□□□□□ -1.59
PTPN13-201ENST00000316707 A0A1W2PRG0 241 aa5.12□□□□□ -1.59
PTPN13-201ENST00000316707 FSCN2O14926 492 aa5.12□□□□□ -1.59
PTPN13-201ENST00000316707 THAP12O43422 761 aa5.12□□□□□ -1.59
PTPN13-201ENST00000316707 SORBS3O60504 671 aa5.12□□□□□ -1.59
PTPN13-201ENST00000316707 TDP2O95551 362 aa5.12□□□□□ -1.59
PTPN13-201ENST00000316707 GNAT1P11488 350 aa5.12□□□□□ -1.59
PTPN13-201ENST00000316707 SLCO1A2P46721 670 aa5.12□□□□□ -1.59
PTPN13-201ENST00000316707 SLC5A9Q2M3M2 681 aa5.12□□□□□ -1.59
PTPN13-201ENST00000316707 MTHFD1LQ6UB35 978 aa5.12□□□□□ -1.59
PTPN13-201ENST00000316707 ZNF365Q70YC5 407 aa5.12□□□□□ -1.59
PTPN13-201ENST00000316707 FAM13CQ8NE31 585 aa5.12□□□□□ -1.59
PTPN13-201ENST00000316707 CABLES1Q8TDN4 633 aa5.12□□□□□ -1.59
PTPN13-201ENST00000316707 C7orf43Q8WVR3 580 aa5.12□□□□□ -1.59
PTPN13-201ENST00000316707 ERP27Q96DN0 273 aa5.12□□□□□ -1.59
PTPN13-201ENST00000316707 GBP5Q96PP8 586 aa5.12□□□□□ -1.59
PTPN13-201ENST00000316707 TLE6Q9H808 572 aa5.12□□□□□ -1.59
PTPN13-201ENST00000316707 PCDHB13Q9Y5F0 798 aa5.12□□□□□ -1.59
PTPN13-201ENST00000316707 E9PMD0 336 aa5.12□□□□□ -1.59
PTPN13-201ENST00000316707 CYP2D6P10635 497 aa5.12□□□□□ -1.59
PTPN13-201ENST00000316707 PTGIRP43119 386 aa5.12□□□□□ -1.59
PTPN13-201ENST00000316707 VSTM1Q6UX27 236 aa5.12□□□□□ -1.59
PTPN13-201ENST00000316707 GPIHBP1Q8IV16 184 aa5.12□□□□□ -1.59
PTPN13-201ENST00000316707 ALG3Q92685 438 aa5.12□□□□□ -1.59
PTPN13-201ENST00000316707 ZBTB10Q96DT7 871 aa5.12□□□□□ -1.59
PTPN13-201ENST00000316707 CDCA7Q9BWT1 371 aaPredicted RBP5.12□□□□□ -1.59
PTPN13-201ENST00000316707 CDC42EP4Q9H3Q1 356 aaKnown RBP5.12□□□□□ -1.59
PTPN13-201ENST00000316707 PCDHA2Q9Y5H9 948 aa5.12□□□□□ -1.59
PTPN13-201ENST00000316707 SLC4A7Q9Y6M7 1214 aa5.12□□□□□ -1.59
PTPN13-201ENST00000316707 MROH7Q68CQ1 1323 aa5.12□□□□□ -1.59
PTPN13-201ENST00000316707 CTNNA2P26232 953 aa5.12□□□□□ -1.59
PTPN13-201ENST00000316707 DRAP1Q14919 205 aaPredicted RBP5.12□□□□□ -1.59
PTPN13-201ENST00000316707 CCDC174Q6PII3 467 aa5.12□□□□□ -1.59
PTPN13-201ENST00000316707 USP37Q86T82 979 aa5.12□□□□□ -1.59
PTPN13-201ENST00000316707 EPS8L3Q8TE67 593 aaKnown RBP5.12□□□□□ -1.59
PTPN13-201ENST00000316707 TRIM11Q96F44 468 aa5.12□□□□□ -1.59
PTPN13-201ENST00000316707 SNF8Q96H20 258 aa5.12□□□□□ -1.59
PTPN13-201ENST00000316707 OLFM3Q96PB7 478 aa5.12□□□□□ -1.59
PTPN13-201ENST00000316707 DDX23Q9BUQ8 820 aaKnown RBP5.12□□□□□ -1.59
PTPN13-201ENST00000316707 GOLPH3Q9H4A6 298 aa5.12□□□□□ -1.59
PTPN13-201ENST00000316707 KCND2Q9NZV8 630 aa5.12□□□□□ -1.59
PTPN13-201ENST00000316707 KCPQ6ZWJ8 1503 aa5.12□□□□□ -1.59
PTPN13-201ENST00000316707 CREB3O43889 395 aa5.12□□□□□ -1.59
PTPN13-201ENST00000316707 KRT16P08779 473 aa5.12□□□□□ -1.59
PTPN13-201ENST00000316707 ABCB4P21439 1286 aa5.12□□□□□ -1.59
PTPN13-201ENST00000316707 RPA1P27694 616 aa5.12□□□□□ -1.59
PTPN13-201ENST00000316707 RPL21P46778 160 aaKnown RBP5.12□□□□□ -1.59
PTPN13-201ENST00000316707 CENPCQ03188 943 aa5.12□□□□□ -1.59
PTPN13-201ENST00000316707 ALCAMQ13740 583 aa5.12□□□□□ -1.59
PTPN13-201ENST00000316707 SLC35G1Q2M3R5 365 aa5.12□□□□□ -1.59
PTPN13-201ENST00000316707 CCDC25Q86WR0 208 aa5.12□□□□□ -1.59
PTPN13-201ENST00000316707 KIF2BQ8N4N8 673 aa5.12□□□□□ -1.59
PTPN13-201ENST00000316707 ITFG2Q969R8 447 aa5.12□□□□□ -1.59
PTPN13-201ENST00000316707 SEPT11Q9NVA2 429 aaKnown RBP5.12□□□□□ -1.59
PTPN13-201ENST00000316707 PPP1R9AQ9ULJ8 1098 aa5.12□□□□□ -1.59
PTPN13-201ENST00000316707 POTECB2RU33 542 aa5.12□□□□□ -1.59
PTPN13-201ENST00000316707 AKAP3O75969 853 aa5.12□□□□□ -1.59
PTPN13-201ENST00000316707 SHBGP04278 402 aa5.12□□□□□ -1.59
PTPN13-201ENST00000316707 ACTN1P12814 892 aa5.12□□□□□ -1.59
PTPN13-201ENST00000316707 MUTP22033 750 aa5.12□□□□□ -1.59
PTPN13-201ENST00000316707 SLC10A5Q5PT55 438 aa5.12□□□□□ -1.59
PTPN13-201ENST00000316707 MIGA2Q7L4E1 593 aa5.12□□□□□ -1.59
PTPN13-201ENST00000316707 KCNK18Q7Z418 384 aa5.12□□□□□ -1.59
PTPN13-201ENST00000316707 NBPF5PQ86XG9 351 aaPredicted RBP5.12□□□□□ -1.59
PTPN13-201ENST00000316707 ATL2Q8NHH9 583 aa5.12□□□□□ -1.59
PTPN13-201ENST00000316707 MIPOL1Q8TD10 442 aa5.12□□□□□ -1.59
PTPN13-201ENST00000316707 ALKBH8Q96BT7 664 aaKnown RBP5.12□□□□□ -1.59
PTPN13-201ENST00000316707 FAM167BQ9BTA0 163 aa5.12□□□□□ -1.59
PTPN13-201ENST00000316707 MINPP1Q9UNW1 487 aa5.12□□□□□ -1.59
PTPN13-201ENST00000316707 C2CD2LO14523 706 aa5.11□□□□□ -1.59
PTPN13-201ENST00000316707 ATF2P15336 505 aa5.11□□□□□ -1.59
PTPN13-201ENST00000316707 MAP7Q14244 749 aa5.11□□□□□ -1.59
PTPN13-201ENST00000316707 KIF22Q14807 665 aa5.11□□□□□ -1.59
PTPN13-201ENST00000316707 HHATQ5VTY9 493 aa5.11□□□□□ -1.59
PTPN13-201ENST00000316707 DPY19L2P1Q6NXN4 242 aa5.11□□□□□ -1.59
PTPN13-201ENST00000316707 PHLDB2Q86SQ0 1253 aa5.11□□□□□ -1.59
PTPN13-201ENST00000316707 RNF217Q8TC41 542 aa5.11□□□□□ -1.59
PTPN13-201ENST00000316707 MCUR1Q96AQ8 359 aa5.11□□□□□ -1.59
PTPN13-201ENST00000316707 NLRP3Q96P20 1036 aa5.11□□□□□ -1.59
PTPN13-201ENST00000316707 AGPAT1Q99943 283 aa5.11□□□□□ -1.59
PTPN13-201ENST00000316707 TIPINQ9BVW5 301 aa5.11□□□□□ -1.59
PTPN13-201ENST00000316707 SIX2Q9NPC8 291 aa5.11□□□□□ -1.59
PTPN13-201ENST00000316707 DMAP1Q9NPF5 467 aaPredicted RBP5.11□□□□□ -1.59
PTPN13-201ENST00000316707 SDAD1Q9NVU7 687 aaKnown RBP eCLIP5.11□□□□□ -1.59
PTPN13-201ENST00000316707 MYO3BQ8WXR4 1341 aa5.11□□□□□ -1.59
PTPN13-201ENST00000316707 FMO5P49326 533 aa5.11□□□□□ -1.59
PTPN13-201ENST00000316707 LRRC23Q53EV4 343 aaPredicted RBP5.11□□□□□ -1.59
PTPN13-201ENST00000316707 THEMIS2Q5TEJ8 643 aa5.11□□□□□ -1.59
PTPN13-201ENST00000316707 TBC1D9BQ66K14 1250 aa5.11□□□□□ -1.59
PTPN13-201ENST00000316707 ANO7Q6IWH7 933 aa5.11□□□□□ -1.59
PTPN13-201ENST00000316707 SFR1Q86XK3 245 aa5.11□□□□□ -1.59
PTPN13-201ENST00000316707 ECHDC2Q86YB7 292 aa5.11□□□□□ -1.59
PTPN13-201ENST00000316707 TDRPQ86YL5 185 aa5.11□□□□□ -1.59
PTPN13-201ENST00000316707 PIP4K2CQ8TBX8 421 aa5.11□□□□□ -1.59
PTPN13-201ENST00000316707 MBOAT7Q96N66 472 aa5.11□□□□□ -1.59
PTPN13-201ENST00000316707 IL1RAPL1Q9NZN1 696 aa5.11□□□□□ -1.59
PTPN13-201ENST00000316707 APEX2Q9UBZ4 518 aa5.11□□□□□ -1.59
PTPN13-201ENST00000316707 PPP1R1BQ9UD71 204 aaPredicted RBP5.11□□□□□ -1.59
PTPN13-201ENST00000316707 SMAPO00193 183 aa5.11□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 198.2 ms