RNA–Protein interactions for RNA: ENST00000309279.11

CHD6-201, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 1 (best) BASIC

Gene CHD6, Length 1,635 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-201ENST00000309279 TRPV6Q9H1D0 765 aa9.09□□□□□ -0.95
CHD6-201ENST00000309279 TBX21Q9UL17 535 aa9.09□□□□□ -0.95
CHD6-201ENST00000309279 TRPC6Q9Y210 931 aa9.09□□□□□ -0.95
CHD6-201ENST00000309279 ATP11BQ9Y2G3 1177 aa9.09□□□□□ -0.95
CHD6-201ENST00000309279 PRRT4C9JH25 899 aa9.09□□□□□ -0.95
CHD6-201ENST00000309279 ZBTB39O15060 712 aa9.09□□□□□ -0.95
CHD6-201ENST00000309279 TLR3O15455 904 aaKnown RBP9.09□□□□□ -0.95
CHD6-201ENST00000309279 TREHO43280 583 aa9.09□□□□□ -0.95
CHD6-201ENST00000309279 CAPN15O75808 1086 aa9.09□□□□□ -0.95
CHD6-201ENST00000309279 TPM2P07951 284 aa9.09□□□□□ -0.95
CHD6-201ENST00000309279 CLTBP09497 229 aa9.09□□□□□ -0.95
CHD6-201ENST00000309279 CCT6AP40227 531 aaKnown RBP9.09□□□□□ -0.95
CHD6-201ENST00000309279 SEC13P55735 322 aa9.09□□□□□ -0.95
CHD6-201ENST00000309279 ZNF200P98182 395 aaPredicted RBP9.09□□□□□ -0.95
CHD6-201ENST00000309279 PTK7Q13308 1070 aa9.09□□□□□ -0.95
CHD6-201ENST00000309279 DNAJC21Q5F1R6 531 aaKnown RBP9.09□□□□□ -0.95
CHD6-201ENST00000309279 ERAP2Q6P179 960 aa9.09□□□□□ -0.95
CHD6-201ENST00000309279 OTUD6AQ7L8S5 288 aa9.09□□□□□ -0.95
CHD6-201ENST00000309279 PGBD3Q8N328 593 aa9.09□□□□□ -0.95
CHD6-201ENST00000309279 SNX29Q8TEQ0 813 aa9.09□□□□□ -0.95
CHD6-201ENST00000309279 LEO1Q8WVC0 666 aaPredicted RBP9.09□□□□□ -0.95
CHD6-201ENST00000309279 CLIC6Q96NY7 704 aa9.09□□□□□ -0.95
CHD6-201ENST00000309279 NACC1Q96RE7 527 aa9.09□□□□□ -0.95
CHD6-201ENST00000309279 NT5C3AQ9H0P0 336 aa9.09□□□□□ -0.95
CHD6-201ENST00000309279 METTL5Q9NRN9 209 aaKnown RBP9.09□□□□□ -0.95
CHD6-201ENST00000309279 ANKEF1Q9NU02 776 aa9.09□□□□□ -0.95
CHD6-201ENST00000309279 TUBE1Q9UJT0 475 aa9.09□□□□□ -0.95
CHD6-201ENST00000309279 PCDHA7Q9UN72 937 aa9.09□□□□□ -0.95
CHD6-201ENST00000309279 PCDHA2Q9Y5H9 948 aa9.09□□□□□ -0.95
CHD6-201ENST00000309279 ARID2Q68CP9 1835 aa9.08□□□□□ -0.96
CHD6-201ENST00000309279 RANBP2P49792 3224 aaKnown RBP9.08□□□□□ -0.96
CHD6-201ENST00000309279 IGKV6-21A0A0C4DH24 114 aa9.08□□□□□ -0.96
CHD6-201ENST00000309279 TMEM150BA6NC51 233 aa9.08□□□□□ -0.96
CHD6-201ENST00000309279 DDX11L8A8MPP1 907 aa9.08□□□□□ -0.96
CHD6-201ENST00000309279 PPP1R3GB7ZBB8 358 aa9.08□□□□□ -0.96
CHD6-201ENST00000309279 GOLGA6L22H0YM25 854 aa9.08□□□□□ -0.96
CHD6-201ENST00000309279 KIAA0355O15063 1070 aa9.08□□□□□ -0.96
CHD6-201ENST00000309279 MAGEB2O15479 319 aa9.08□□□□□ -0.96
CHD6-201ENST00000309279 EVI5O60447 810 aa9.08□□□□□ -0.96
CHD6-201ENST00000309279 CUTAO60888 179 aa9.08□□□□□ -0.96
CHD6-201ENST00000309279 C22orf31O95567 290 aa9.08□□□□□ -0.96
CHD6-201ENST00000309279 KLRC1P26715 233 aa9.08□□□□□ -0.96
CHD6-201ENST00000309279 UBA7P41226 1012 aa9.08□□□□□ -0.96
CHD6-201ENST00000309279 RARRES1P49788 294 aa9.08□□□□□ -0.96
CHD6-201ENST00000309279 ALKBH2Q6NS38 261 aa9.08□□□□□ -0.96
CHD6-201ENST00000309279 TAF2Q6P1X5 1199 aa9.08□□□□□ -0.96
CHD6-201ENST00000309279 POTEGQ6S5H5 508 aa9.08□□□□□ -0.96
CHD6-201ENST00000309279 MTHFD1LQ6UB35 978 aa9.08□□□□□ -0.96
CHD6-201ENST00000309279 USP49Q70CQ1 688 aa9.08□□□□□ -0.96
CHD6-201ENST00000309279 TRMT1LQ7Z2T5 733 aaKnown RBP9.08□□□□□ -0.96
CHD6-201ENST00000309279 CABP7Q86V35 215 aa9.08□□□□□ -0.96
CHD6-201ENST00000309279 TRAPPC12Q8WVT3 735 aa9.08□□□□□ -0.96
CHD6-201ENST00000309279 CENPTQ96BT3 561 aa9.08□□□□□ -0.96
CHD6-201ENST00000309279 TBC1D20Q96BZ9 403 aa9.08□□□□□ -0.96
CHD6-201ENST00000309279 EPSTI1Q96J88 318 aa9.08□□□□□ -0.96
CHD6-201ENST00000309279 PNMA5Q96PV4 448 aa9.08□□□□□ -0.96
CHD6-201ENST00000309279 PDLIM7Q9NR12 457 aa9.08□□□□□ -0.96
CHD6-201ENST00000309279 CYP26B1Q9NR63 512 aa9.08□□□□□ -0.96
CHD6-201ENST00000309279 PARP2Q9UGN5 583 aa9.08□□□□□ -0.96
CHD6-201ENST00000309279 SEPT9Q9UHD8 586 aaPredicted RBP9.08□□□□□ -0.96
CHD6-201ENST00000309279 DBR1Q9UK59 544 aaKnown RBP9.08□□□□□ -0.96
CHD6-201ENST00000309279 KIAA1024Q9UPX6 916 aa9.08□□□□□ -0.96
CHD6-201ENST00000309279 EPB41L3Q9Y2J2 1087 aaPredicted RBP9.08□□□□□ -0.96
CHD6-201ENST00000309279 KDM3AQ9Y4C1 1321 aa9.08□□□□□ -0.96
CHD6-201ENST00000309279 SMIM35A0A1B0GVV1 85 aa9.07□□□□□ -0.96
CHD6-201ENST00000309279 TRIM43BA6NCK2 446 aa9.07□□□□□ -0.96
CHD6-201ENST00000309279 PITPNM1O00562 1244 aa9.07□□□□□ -0.96
CHD6-201ENST00000309279 KIF5CO60282 957 aa9.07□□□□□ -0.96
CHD6-201ENST00000309279 MAFO75444 373 aaPredicted RBP9.07□□□□□ -0.96
CHD6-201ENST00000309279 RPLP2P05387 115 aaKnown RBP9.07□□□□□ -0.96
CHD6-201ENST00000309279 NEFHP12036 1026 aa9.07□□□□□ -0.96
CHD6-201ENST00000309279 PSMA3P25788 255 aa9.07□□□□□ -0.96
CHD6-201ENST00000309279 MAPK1P28482 360 aa9.07□□□□□ -0.96
CHD6-201ENST00000309279 ME1P48163 572 aa9.07□□□□□ -0.96
CHD6-201ENST00000309279 NPEPPSP55786 919 aa9.07□□□□□ -0.96
CHD6-201ENST00000309279 GRB10Q13322 594 aa9.07□□□□□ -0.96
CHD6-201ENST00000309279 SERINC3Q13530 473 aa9.07□□□□□ -0.96
CHD6-201ENST00000309279 TRIM71Q2Q1W2 868 aaKnown RBP9.07□□□□□ -0.96
CHD6-201ENST00000309279 TMEM119Q4V9L6 283 aa9.07□□□□□ -0.96
CHD6-201ENST00000309279 ALFQ53S48 1182 aa9.07□□□□□ -0.96
CHD6-201ENST00000309279 SPECC1Q5M775 1068 aa9.07□□□□□ -0.96
CHD6-201ENST00000309279 PLA2G4FQ68DD2 849 aa9.07□□□□□ -0.96
CHD6-201ENST00000309279 ADALQ6DHV7 355 aa9.07□□□□□ -0.96
CHD6-201ENST00000309279 SHC4Q6S5L8 630 aa9.07□□□□□ -0.96
CHD6-201ENST00000309279 SH3RF1Q7Z6J0 888 aa9.07□□□□□ -0.96
CHD6-201ENST00000309279 IQCF2Q8IXL9 164 aa9.07□□□□□ -0.96
CHD6-201ENST00000309279 LINC01465Q8N7H1 131 aa9.07□□□□□ -0.96
CHD6-201ENST00000309279 CAGE1Q8TC20 777 aa9.07□□□□□ -0.96
CHD6-201ENST00000309279 PIGOQ8TEQ8 1089 aa9.07□□□□□ -0.96
CHD6-201ENST00000309279 DPF3Q92784 378 aa9.07□□□□□ -0.96
CHD6-201ENST00000309279 SYMPKQ92797 1274 aaKnown RBP9.07□□□□□ -0.96
CHD6-201ENST00000309279 NELL1Q92832 810 aa9.07□□□□□ -0.96
CHD6-201ENST00000309279 TRIM43Q96BQ3 446 aaPredicted RBP9.07□□□□□ -0.96
CHD6-201ENST00000309279 CEP170P1Q96L14 293 aa9.07□□□□□ -0.96
CHD6-201ENST00000309279 SH2D3AQ9BRG2 576 aa9.07□□□□□ -0.96
CHD6-201ENST00000309279 XPO4Q9C0E2 1151 aaKnown RBP9.07□□□□□ -0.96
CHD6-201ENST00000309279 DHX33Q9H6R0 707 aaKnown RBP9.07□□□□□ -0.96
CHD6-201ENST00000309279 DDX19AQ9NUU7 478 aaKnown RBP9.07□□□□□ -0.96
CHD6-201ENST00000309279 TMEM39AQ9NV64 488 aa9.07□□□□□ -0.96
CHD6-201ENST00000309279 TAGLN3Q9UI15 199 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms