RNA–Protein interactions for RNA: ENST00000308987.5

CKS1B-201, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CKS1B, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-201ENST00000308987 UQCRHP07919 91 aa5.64□□□□□ -1.51
CKS1B-201ENST00000308987 USP17L7P0C7H9 530 aa5.64□□□□□ -1.51
CKS1B-201ENST00000308987 ZKSCAN1P17029 563 aaPredicted RBP5.64□□□□□ -1.51
CKS1B-201ENST00000308987 HOXA7P31268 230 aaPredicted RBP5.64□□□□□ -1.51
CKS1B-201ENST00000308987 MCAMP43121 646 aa5.64□□□□□ -1.51
CKS1B-201ENST00000308987 GCLCP48506 637 aaPredicted RBP5.64□□□□□ -1.51
CKS1B-201ENST00000308987 GALK1P51570 392 aa5.64□□□□□ -1.51
CKS1B-201ENST00000308987 AK2P54819 239 aa5.64□□□□□ -1.51
CKS1B-201ENST00000308987 RUFY3Q7L099 469 aa5.64□□□□□ -1.51
CKS1B-201ENST00000308987 METTL16Q86W50 562 aaKnown RBP5.64□□□□□ -1.51
CKS1B-201ENST00000308987 SPPL2CQ8IUH8 684 aa5.64□□□□□ -1.51
CKS1B-201ENST00000308987 TDHQ8IZJ6 230 aa5.64□□□□□ -1.51
CKS1B-201ENST00000308987 SH3RF3Q8TEJ3 882 aaPredicted RBP5.64□□□□□ -1.51
CKS1B-201ENST00000308987 UPF3BQ9BZI7 483 aaKnown RBP5.64□□□□□ -1.51
CKS1B-201ENST00000308987 ADAM7Q9H2U9 754 aa5.64□□□□□ -1.51
CKS1B-201ENST00000308987 TRIT1Q9H3H1 467 aaKnown RBP5.64□□□□□ -1.51
CKS1B-201ENST00000308987 C11orf49Q9H6J7 331 aa5.64□□□□□ -1.51
CKS1B-201ENST00000308987 EPB41L4AQ9HCS5 686 aaPredicted RBP5.64□□□□□ -1.51
CKS1B-201ENST00000308987 DIAPH3Q9NSV4 1193 aa5.64□□□□□ -1.51
CKS1B-201ENST00000308987 GNL3LQ9NVN8 582 aaKnown RBP5.64□□□□□ -1.51
CKS1B-201ENST00000308987 FLRT1Q9NZU1 646 aa5.64□□□□□ -1.51
CKS1B-201ENST00000308987 MBD1Q9UIS9 605 aaPredicted RBP5.64□□□□□ -1.51
CKS1B-201ENST00000308987 STXBP5LQ9Y2K9 1186 aa5.64□□□□□ -1.51
CKS1B-201ENST00000308987 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP5.64□□□□□ -1.512e-9■□□□□ 10
CKS1B-201ENST00000308987 MYH7P12883 1935 aa5.64□□□□□ -1.51
CKS1B-201ENST00000308987 BRWD1Q9NSI6 2320 aa5.63□□□□□ -1.51
CKS1B-201ENST00000308987 ZNF236Q9UL36 1845 aa5.63□□□□□ -1.51
CKS1B-201ENST00000308987 WDFY4Q6ZS81 3184 aa5.63□□□□□ -1.51
CKS1B-201ENST00000308987 ADCY5O95622 1261 aa5.63□□□□□ -1.51
CKS1B-201ENST00000308987 CCDC192P0DO97 292 aa5.63□□□□□ -1.51
CKS1B-201ENST00000308987 CAPN2P17655 700 aa5.63□□□□□ -1.51
CKS1B-201ENST00000308987 CDK8P49336 464 aa5.63□□□□□ -1.51
CKS1B-201ENST00000308987 BACE1P56817 501 aa5.63□□□□□ -1.51
CKS1B-201ENST00000308987 HERVK_113P62684 666 aa5.63□□□□□ -1.51
CKS1B-201ENST00000308987 SRSF3P84103 164 aaKnown RBP5.63□□□□□ -1.51
CKS1B-201ENST00000308987 PLP2Q04941 152 aa5.63□□□□□ -1.51
CKS1B-201ENST00000308987 KRT32Q14532 448 aa5.63□□□□□ -1.51
CKS1B-201ENST00000308987 NOLC1Q14978 699 aaKnown RBP eCLIP5.63□□□□□ -1.513e-12■■■■□ 22
CKS1B-201ENST00000308987 NECTIN1Q15223 517 aa5.63□□□□□ -1.51
CKS1B-201ENST00000308987 TSHZ3Q63HK5 1081 aa5.63□□□□□ -1.51
CKS1B-201ENST00000308987 TTBK2Q6IQ55 1244 aa5.63□□□□□ -1.51
CKS1B-201ENST00000308987 TEX11Q8IYF3 940 aa5.63□□□□□ -1.51
CKS1B-201ENST00000308987 SPATA5Q8NB90 893 aa5.63□□□□□ -1.51
CKS1B-201ENST00000308987 TRPV1Q8NER1 839 aa5.63□□□□□ -1.51
CKS1B-201ENST00000308987 MAP4K1Q92918 833 aa5.63□□□□□ -1.51
CKS1B-201ENST00000308987 CHMP4CQ96CF2 233 aa5.63□□□□□ -1.51
CKS1B-201ENST00000308987 OSBPL7Q9BZF2 842 aa5.63□□□□□ -1.51
CKS1B-201ENST00000308987 SCAND2PQ9GZW5 306 aaPredicted RBP5.63□□□□□ -1.51
CKS1B-201ENST00000308987 IL1RAPL2Q9NP60 686 aa5.63□□□□□ -1.51
CKS1B-201ENST00000308987 PDRG1Q9NUG6 133 aa5.63□□□□□ -1.51
CKS1B-201ENST00000308987 GPATCH2Q9NW75 528 aa5.63□□□□□ -1.51
CKS1B-201ENST00000308987 EBF1Q9UH73 591 aa5.63□□□□□ -1.51
CKS1B-201ENST00000308987 MTMR6Q9Y217 621 aa5.63□□□□□ -1.51
CKS1B-201ENST00000308987 TCF20Q9UGU0 1960 aaKnown RBP5.63□□□□□ -1.51
CKS1B-201ENST00000308987 TCHHQ07283 1943 aa5.62□□□□□ -1.51
CKS1B-201ENST00000308987 OR14I1A6ND48 311 aa5.62□□□□□ -1.51
CKS1B-201ENST00000308987 TREHO43280 583 aa5.62□□□□□ -1.51
CKS1B-201ENST00000308987 PGRP06401 933 aa5.62□□□□□ -1.51
CKS1B-201ENST00000308987 IFIT2P09913 472 aaKnown RBP5.62□□□□□ -1.51
CKS1B-201ENST00000308987 CASTP20810 708 aaKnown RBP5.62□□□□□ -1.51
CKS1B-201ENST00000308987 GJB2P29033 226 aa5.62□□□□□ -1.51
CKS1B-201ENST00000308987 EPHB3P54753 998 aa5.62□□□□□ -1.51
CKS1B-201ENST00000308987 DYNLL1P63167 89 aaKnown RBP5.62□□□□□ -1.51
CKS1B-201ENST00000308987 KRT85P78386 507 aa5.62□□□□□ -1.51
CKS1B-201ENST00000308987 SYCP1Q15431 976 aa5.62□□□□□ -1.51
CKS1B-201ENST00000308987 SPTY2D1Q68D10 685 aaPredicted RBP5.62□□□□□ -1.51
CKS1B-201ENST00000308987 ALG1LQ6GMV1 187 aa5.62□□□□□ -1.51
CKS1B-201ENST00000308987 RBM43Q6ZSC3 357 aaKnown RBP5.62□□□□□ -1.51
CKS1B-201ENST00000308987 GPR142Q7Z601 462 aa5.62□□□□□ -1.51
CKS1B-201ENST00000308987 ARHGAP30Q7Z6I6 1101 aaPredicted RBP5.62□□□□□ -1.51
CKS1B-201ENST00000308987 TSPYL5Q86VY4 417 aaPredicted RBP5.62□□□□□ -1.51
CKS1B-201ENST00000308987 MAPKAPK5Q8IW41 473 aa5.62□□□□□ -1.51
CKS1B-201ENST00000308987 SMAP1Q8IYB5 467 aaPredicted RBP5.62□□□□□ -1.51
CKS1B-201ENST00000308987 PPP1R13LQ8WUF5 828 aa5.62□□□□□ -1.51
CKS1B-201ENST00000308987 IL25Q9H293 177 aa5.62□□□□□ -1.51
CKS1B-201ENST00000308987 DDX19AQ9NUU7 478 aaKnown RBP5.62□□□□□ -1.51
CKS1B-201ENST00000308987 AATFQ9NY61 560 aaKnown RBP eCLIP5.62□□□□□ -1.51
CKS1B-201ENST00000308987 ZBTB21Q9ULJ3 1066 aa5.62□□□□□ -1.51
CKS1B-201ENST00000308987 CNPY2Q9Y2B0 182 aa5.62□□□□□ -1.51
CKS1B-201ENST00000308987 PCDHA11Q9Y5I1 949 aa5.62□□□□□ -1.51
CKS1B-201ENST00000308987 FLT1P17948 1338 aa5.62□□□□□ -1.51
CKS1B-201ENST00000308987 C5orf42Q9H799 3197 aa5.62□□□□□ -1.51
CKS1B-201ENST00000308987 ZC3H12DA2A288 527 aaKnown RBP5.61□□□□□ -1.51
CKS1B-201ENST00000308987 SUV39H1O43463 412 aa5.61□□□□□ -1.51
CKS1B-201ENST00000308987 MAP4K4O95819 1239 aaPredicted RBP5.61□□□□□ -1.51
CKS1B-201ENST00000308987 GUCY1A2P33402 732 aa5.61□□□□□ -1.51
CKS1B-201ENST00000308987 ETV3P41162 512 aa5.61□□□□□ -1.51
CKS1B-201ENST00000308987 IRX3P78415 501 aaPredicted RBP5.61□□□□□ -1.51
CKS1B-201ENST00000308987 CHRNEQ04844 493 aa5.61□□□□□ -1.51
CKS1B-201ENST00000308987 KRTAP1-1Q07627 177 aa5.61□□□□□ -1.51
CKS1B-201ENST00000308987 G3BP1Q13283 466 aaKnown RBP eCLIP5.61□□□□□ -1.51
CKS1B-201ENST00000308987 OS9Q13438 667 aaPredicted RBP5.61□□□□□ -1.51
CKS1B-201ENST00000308987 SEPT6Q14141 434 aa5.61□□□□□ -1.51
CKS1B-201ENST00000308987 DSC3Q14574 896 aa5.61□□□□□ -1.51
CKS1B-201ENST00000308987 C9orf50Q5SZB4 431 aa5.61□□□□□ -1.51
CKS1B-201ENST00000308987 CREB3L3Q68CJ9 461 aa5.61□□□□□ -1.51
CKS1B-201ENST00000308987 ATL3Q6DD88 541 aa5.61□□□□□ -1.51
CKS1B-201ENST00000308987 CWC27Q6UX04 472 aaKnown RBP5.61□□□□□ -1.51
CKS1B-201ENST00000308987 RGS22Q8NE09 1264 aa5.61□□□□□ -1.51
CKS1B-201ENST00000308987 GPRC5AQ8NFJ5 357 aa5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms