RNA–Protein interactions for RNA: ENST00000308177.4

PCDHGC3-201, Transcript of protocadherin gamma subfamily C, 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGC3, Length 4,725 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-201ENST00000308177 KCTD6Q8NC69 237 aa12.24□□□□□ -0.45
PCDHGC3-201ENST00000308177 ANKEF1Q9NU02 776 aa12.24□□□□□ -0.45
PCDHGC3-201ENST00000308177 INTS9Q9NV88 658 aaKnown RBP12.24□□□□□ -0.45
PCDHGC3-201ENST00000308177 CHD2O14647 1828 aaKnown RBP12.24□□□□□ -0.45
PCDHGC3-201ENST00000308177 ZNF185O15231 689 aa12.24□□□□□ -0.45
PCDHGC3-201ENST00000308177 PRPSAP2O60256 369 aa12.24□□□□□ -0.45
PCDHGC3-201ENST00000308177 GALCP54803 685 aa12.24□□□□□ -0.45
PCDHGC3-201ENST00000308177 TGFB2P61812 414 aa12.24□□□□□ -0.45
PCDHGC3-201ENST00000308177 CCDC110Q8TBZ0 833 aa12.24□□□□□ -0.45
PCDHGC3-201ENST00000308177 CCHCR1Q8TD31 782 aa12.24□□□□□ -0.45
PCDHGC3-201ENST00000308177 FAM193BQ96PV7 902 aaPredicted RBP12.24□□□□□ -0.45
PCDHGC3-201ENST00000308177 I3L4J1 428 aa12.24□□□□□ -0.45
PCDHGC3-201ENST00000308177 PSMA2P25787 234 aa12.24□□□□□ -0.45
PCDHGC3-201ENST00000308177 YWHAGP61981 247 aaKnown RBP eCLIP12.24□□□□□ -0.45
PCDHGC3-201ENST00000308177 VSNL1P62760 191 aa12.24□□□□□ -0.45
PCDHGC3-201ENST00000308177 FKBP1AP62942 108 aaKnown RBP12.24□□□□□ -0.45
PCDHGC3-201ENST00000308177 GIT2Q14161 759 aa12.24□□□□□ -0.45
PCDHGC3-201ENST00000308177 DUOXA2Q1HG44 320 aa12.24□□□□□ -0.45
PCDHGC3-201ENST00000308177 SPDYE2Q495Y8 402 aa12.24□□□□□ -0.45
PCDHGC3-201ENST00000308177 KLHDC7AQ5VTJ3 777 aa12.24□□□□□ -0.45
PCDHGC3-201ENST00000308177 ATP2A3Q93084 1043 aa12.24□□□□□ -0.45
PCDHGC3-201ENST00000308177 CD2APQ9Y5K6 639 aa12.24□□□□□ -0.45
PCDHGC3-201ENST00000308177 IQCA1LA6NCM1 817 aa12.23□□□□□ -0.45
PCDHGC3-201ENST00000308177 CALB1P05937 261 aa12.23□□□□□ -0.45
PCDHGC3-201ENST00000308177 ACOT2P49753 483 aa12.23□□□□□ -0.45
PCDHGC3-201ENST00000308177 DNAJC7Q99615 494 aa12.23□□□□□ -0.45
PCDHGC3-201ENST00000308177 LRRC4Q9HBW1 653 aa12.23□□□□□ -0.45
PCDHGC3-201ENST00000308177 TOPORSQ9NS56 1045 aaPredicted RBP12.23□□□□□ -0.45
PCDHGC3-201ENST00000308177 FOXP2O15409 715 aa12.23□□□□□ -0.45
PCDHGC3-201ENST00000308177 FGRP09769 529 aa12.23□□□□□ -0.45
PCDHGC3-201ENST00000308177 ZSCAN20P17040 1043 aaPredicted RBP12.23□□□□□ -0.45
PCDHGC3-201ENST00000308177 CCT5P48643 541 aa12.23□□□□□ -0.45
PCDHGC3-201ENST00000308177 NFX1Q12986 1120 aaKnown RBP12.23□□□□□ -0.45
PCDHGC3-201ENST00000308177 NAB2Q15742 525 aa12.23□□□□□ -0.45
PCDHGC3-201ENST00000308177 CHST13Q8NET6 341 aa12.23□□□□□ -0.45
PCDHGC3-201ENST00000308177 OR6B3Q8NGW1 331 aa12.23□□□□□ -0.45
PCDHGC3-201ENST00000308177 SYN2Q92777 582 aaPredicted RBP12.23□□□□□ -0.45
PCDHGC3-201ENST00000308177 AGPAT3Q9NRZ7 376 aa12.23□□□□□ -0.45
PCDHGC3-201ENST00000308177 SEPT10Q9P0V9 454 aa12.23□□□□□ -0.45
PCDHGC3-201ENST00000308177 MAD1L1Q9Y6D9 718 aa12.23□□□□□ -0.45
PCDHGC3-201ENST00000308177 CTIFO43310 598 aaKnown RBP12.23□□□□□ -0.45
PCDHGC3-201ENST00000308177 SLCO1A2P46721 670 aa12.23□□□□□ -0.45
PCDHGC3-201ENST00000308177 IFNAR2P48551 515 aa12.23□□□□□ -0.45
PCDHGC3-201ENST00000308177 EIF3BP55884 814 aaKnown RBP12.23□□□□□ -0.45
PCDHGC3-201ENST00000308177 BACE1P56817 501 aa12.23□□□□□ -0.45
PCDHGC3-201ENST00000308177 EMC2Q15006 297 aa12.23□□□□□ -0.45
PCDHGC3-201ENST00000308177 SH3RF1Q7Z6J0 888 aa12.23□□□□□ -0.45
PCDHGC3-201ENST00000308177 RDM1Q8NG50 284 aa12.23□□□□□ -0.45
PCDHGC3-201ENST00000308177 GPRASP2Q96D09 838 aa12.23□□□□□ -0.45
PCDHGC3-201ENST00000308177 CCDC97Q96F63 343 aaPredicted RBP12.23□□□□□ -0.45
PCDHGC3-201ENST00000308177 HEMGNQ9BXL5 484 aa12.23□□□□□ -0.45
PCDHGC3-201ENST00000308177 NOC2LQ9Y3T9 749 aaKnown RBP12.23□□□□□ -0.45
PCDHGC3-201ENST00000308177 CIITAP33076 1130 aa12.23□□□□□ -0.45
PCDHGC3-201ENST00000308177 AP3M2P53677 418 aa12.23□□□□□ -0.45
PCDHGC3-201ENST00000308177 PMS1P54277 932 aaKnown RBP12.23□□□□□ -0.45
PCDHGC3-201ENST00000308177 MDM2Q00987 491 aaPredicted RBP12.23□□□□□ -0.45
PCDHGC3-201ENST00000308177 E2F4Q16254 413 aa12.23□□□□□ -0.45
PCDHGC3-201ENST00000308177 FIGNQ5HY92 759 aa12.23□□□□□ -0.45
PCDHGC3-201ENST00000308177 PPM1EQ8WY54 764 aa12.23□□□□□ -0.45
PCDHGC3-201ENST00000308177 PNMA5Q96PV4 448 aa12.23□□□□□ -0.45
PCDHGC3-201ENST00000308177 MRIQ9BWK5 157 aa12.23□□□□□ -0.45
PCDHGC3-201ENST00000308177 NGRNQ9NPE2 291 aaKnown RBP12.23□□□□□ -0.45
PCDHGC3-201ENST00000308177 PPP1R9AQ9ULJ8 1098 aa12.23□□□□□ -0.45
PCDHGC3-201ENST00000308177 MUTP22033 750 aa12.22□□□□□ -0.45
PCDHGC3-201ENST00000308177 TRIM72Q6ZMU5 477 aa12.22□□□□□ -0.45
PCDHGC3-201ENST00000308177 MORC4Q8TE76 937 aa12.22□□□□□ -0.45
PCDHGC3-201ENST00000308177 RBM41Q96IZ5 413 aaKnown RBP12.22□□□□□ -0.45
PCDHGC3-201ENST00000308177 SLC38A10Q9HBR0 1119 aa12.22□□□□□ -0.45
PCDHGC3-201ENST00000308177 ADAM21Q9UKJ8 722 aa12.22□□□□□ -0.45
PCDHGC3-201ENST00000308177 NOVA2Q9UNW9 492 aaKnown RBP12.22□□□□□ -0.45
PCDHGC3-201ENST00000308177 TOPAZ1Q8N9V7 1692 aa12.22□□□□□ -0.45
PCDHGC3-201ENST00000308177 TARSL2A2RTX5 802 aaKnown RBP12.22□□□□□ -0.45
PCDHGC3-201ENST00000308177 RASGRF2O14827 1237 aa12.22□□□□□ -0.45
PCDHGC3-201ENST00000308177 RTN2O75298 545 aa12.22□□□□□ -0.45
PCDHGC3-201ENST00000308177 PLEKP08567 350 aaPredicted RBP12.22□□□□□ -0.45
PCDHGC3-201ENST00000308177 NR1D1P20393 614 aa12.22□□□□□ -0.45
PCDHGC3-201ENST00000308177 KIAA0895Q8NCT3 520 aa12.22□□□□□ -0.45
PCDHGC3-201ENST00000308177 SCFD1Q8WVM8 642 aa12.22□□□□□ -0.45
PCDHGC3-201ENST00000308177 ZWILCHQ9H900 591 aa12.22□□□□□ -0.45
PCDHGC3-201ENST00000308177 MAP3K20Q9NYL2 800 aaKnown RBP12.22□□□□□ -0.45
PCDHGC3-201ENST00000308177 KLHL14Q9P2G3 628 aa12.22□□□□□ -0.45
PCDHGC3-201ENST00000308177 TFR2Q9UP52 801 aa12.22□□□□□ -0.45
PCDHGC3-201ENST00000308177 NFIBO00712 420 aa12.22□□□□□ -0.45
PCDHGC3-201ENST00000308177 TJP3O95049 919 aa12.22□□□□□ -0.45
PCDHGC3-201ENST00000308177 PRKCBP05771 671 aa12.22□□□□□ -0.45
PCDHGC3-201ENST00000308177 TAL1P17542 331 aaPredicted RBP12.22□□□□□ -0.45
PCDHGC3-201ENST00000308177 MMP14P50281 582 aa12.22□□□□□ -0.45
PCDHGC3-201ENST00000308177 GYS2P54840 703 aa12.22□□□□□ -0.45
PCDHGC3-201ENST00000308177 BASP1P80723 227 aaKnown RBP12.22□□□□□ -0.45
PCDHGC3-201ENST00000308177 SPATS2Q86XZ4 545 aaKnown RBP12.22□□□□□ -0.45
PCDHGC3-201ENST00000308177 CYP2W1Q8TAV3 490 aa12.22□□□□□ -0.45
PCDHGC3-201ENST00000308177 L2HGDHQ9H9P8 463 aa12.22□□□□□ -0.45
PCDHGC3-201ENST00000308177 FAM198AQ9UFP1 575 aa12.22□□□□□ -0.45
PCDHGC3-201ENST00000308177 STRIP2Q9ULQ0 834 aa12.22□□□□□ -0.45
PCDHGC3-201ENST00000308177 ARL4AP40617 200 aa12.22□□□□□ -0.45
PCDHGC3-201ENST00000308177 SNRPFP62306 86 aaKnown RBP12.22□□□□□ -0.45
PCDHGC3-201ENST00000308177 TERF2Q15554 542 aa12.22□□□□□ -0.45
PCDHGC3-201ENST00000308177 NBPF12Q5TAG4 269 aaPredicted RBP12.22□□□□□ -0.45
PCDHGC3-201ENST00000308177 DARS2Q6PI48 645 aaKnown RBP12.22□□□□□ -0.45
PCDHGC3-201ENST00000308177 PNMA8AQ86V59 439 aaPredicted RBP12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms