RNA–Protein interactions for RNA: ENST00000306085.10

TRIM56-201, Transcript of tripartite motif containing 56, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TRIM56, Length 10,952 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-201ENST00000306085 PALMO75781 387 aa14.17□□□□□ -0.14
TRIM56-201ENST00000306085 TRIM49P0CI25 452 aa14.17□□□□□ -0.14
TRIM56-201ENST00000306085 TRIM49CP0CI26 452 aa14.17□□□□□ -0.14
TRIM56-201ENST00000306085 LRRC14Q15048 493 aa14.17□□□□□ -0.14
TRIM56-201ENST00000306085 ARMCX4Q5H9R4 360 aa14.17□□□□□ -0.14
TRIM56-201ENST00000306085 RNASE11Q8TAA1 199 aaKnown RBP14.17□□□□□ -0.14
TRIM56-201ENST00000306085 TNNQ9UQP3 1299 aa14.17□□□□□ -0.14
TRIM56-201ENST00000306085 FOSP01100 380 aaPredicted RBP14.17□□□□□ -0.14
TRIM56-201ENST00000306085 KRT78Q8N1N4 520 aa14.17□□□□□ -0.14
TRIM56-201ENST00000306085 SCN3BQ9NY72 215 aa14.17□□□□□ -0.14
TRIM56-201ENST00000306085 TCP11X1B4DZS4 312 aa14.17□□□□□ -0.14
TRIM56-201ENST00000306085 HMGB3O15347 200 aaKnown RBP14.17□□□□□ -0.14
TRIM56-201ENST00000306085 ZAP70P43403 619 aa14.17□□□□□ -0.14
TRIM56-201ENST00000306085 KRT24Q2M2I5 525 aa14.17□□□□□ -0.14
TRIM56-201ENST00000306085 SLFNL1Q499Z3 407 aa14.17□□□□□ -0.14
TRIM56-201ENST00000306085 GLMNQ92990 594 aa14.17□□□□□ -0.14
TRIM56-201ENST00000306085 P2RX5Q93086 422 aa14.17□□□□□ -0.14
TRIM56-201ENST00000306085 NPHS2Q9NP85 383 aa14.17□□□□□ -0.14
TRIM56-201ENST00000306085 KRT84Q9NSB2 600 aa14.17□□□□□ -0.14
TRIM56-201ENST00000306085 ADGRA2Q96PE1 1338 aa14.17□□□□□ -0.14
TRIM56-201ENST00000306085 PDE8AO60658 829 aa14.17□□□□□ -0.14
TRIM56-201ENST00000306085 GCOM2Q9BZD3 368 aaPredicted RBP14.17□□□□□ -0.14
TRIM56-201ENST00000306085 UBTFL6P0CB48 400 aaPredicted RBP14.17□□□□□ -0.14
TRIM56-201ENST00000306085 SRLQ86TD4 932 aa14.17□□□□□ -0.14
TRIM56-201ENST00000306085 C19orf18Q8NEA5 215 aa14.17□□□□□ -0.14
TRIM56-201ENST00000306085 PRMT1Q99873 361 aaKnown RBP14.17□□□□□ -0.14
TRIM56-201ENST00000306085 PRG4Q92954 1404 aaPredicted RBP14.17□□□□□ -0.14
TRIM56-201ENST00000306085 PRKCQQ04759 706 aa14.17□□□□□ -0.14
TRIM56-201ENST00000306085 COX10Q12887 443 aa14.17□□□□□ -0.14
TRIM56-201ENST00000306085 SLC25A24Q6NUK1 477 aa14.17□□□□□ -0.14
TRIM56-201ENST00000306085 SOAT1P35610 550 aa14.17□□□□□ -0.14
TRIM56-201ENST00000306085 FANCEQ9HB96 536 aa14.17□□□□□ -0.14
TRIM56-201ENST00000306085 MEI1Q5TIA1 1274 aa14.17□□□□□ -0.14
TRIM56-201ENST00000306085 NLRP14Q86W24 1093 aa14.17□□□□□ -0.14
TRIM56-201ENST00000306085 BBS7Q8IWZ6 715 aa14.17□□□□□ -0.14
TRIM56-201ENST00000306085 CCNL1Q9UK58 526 aaPredicted RBP14.17□□□□□ -0.14
TRIM56-201ENST00000306085 STRNO43815 780 aa14.16□□□□□ -0.14
TRIM56-201ENST00000306085 DSTYKQ6XUX3 929 aa14.16□□□□□ -0.14
TRIM56-201ENST00000306085 CHSY1Q86X52 802 aa14.16□□□□□ -0.14
TRIM56-201ENST00000306085 SFR1Q86XK3 245 aa14.16□□□□□ -0.14
TRIM56-201ENST00000306085 C20orf96Q9NUD7 363 aaPredicted RBP14.16□□□□□ -0.14
TRIM56-201ENST00000306085 PEX1O43933 1283 aa14.16□□□□□ -0.14
TRIM56-201ENST00000306085 CSTF3Q12996 717 aaKnown RBP14.16□□□□□ -0.14
TRIM56-201ENST00000306085 SCN4BQ8IWT1 228 aa14.16□□□□□ -0.14
TRIM56-201ENST00000306085 ZBED8Q8IZ13 594 aa14.16□□□□□ -0.14
TRIM56-201ENST00000306085 CYFIP2Q96F07 1278 aa14.16□□□□□ -0.14
TRIM56-201ENST00000306085 FARP1Q9Y4F1 1045 aaPredicted RBP14.16□□□□□ -0.14
TRIM56-201ENST00000306085 MYH9P35579 1960 aaKnown RBP14.16□□□□□ -0.14
TRIM56-201ENST00000306085 NDUFA10O95299 355 aa14.16□□□□□ -0.14
TRIM56-201ENST00000306085 ENO3P13929 434 aaPredicted RBP14.16□□□□□ -0.14
TRIM56-201ENST00000306085 ANKRD40Q6AI12 368 aa14.16□□□□□ -0.14
TRIM56-201ENST00000306085 LRRC31Q6UY01 552 aa14.16□□□□□ -0.14
TRIM56-201ENST00000306085 NEK10Q6ZWH5 1172 aa14.16□□□□□ -0.14
TRIM56-201ENST00000306085 LONP2Q86WA8 852 aa14.16□□□□□ -0.14
TRIM56-201ENST00000306085 TBC1D19Q8N5T2 526 aa14.16□□□□□ -0.14
TRIM56-201ENST00000306085 CAPN10Q9HC96 672 aa14.16□□□□□ -0.14
TRIM56-201ENST00000306085 KRR1Q13601 381 aaKnown RBP14.16□□□□□ -0.14
TRIM56-201ENST00000306085 USP39Q53GS9 565 aaKnown RBP14.16□□□□□ -0.14
TRIM56-201ENST00000306085 E4F1Q66K89 784 aaPredicted RBP14.16□□□□□ -0.14
TRIM56-201ENST00000306085 GALNT17Q6IS24 598 aa14.16□□□□□ -0.14
TRIM56-201ENST00000306085 GRAMD1CQ8IYS0 662 aa14.16□□□□□ -0.14
TRIM56-201ENST00000306085 CEP170P1Q96L14 293 aa14.16□□□□□ -0.14
TRIM56-201ENST00000306085 NNMTP40261 264 aa14.16□□□□□ -0.14
TRIM56-201ENST00000306085 MXI1P50539 228 aa14.16□□□□□ -0.14
TRIM56-201ENST00000306085 KIZQ2M2Z5 673 aa14.16□□□□□ -0.14
TRIM56-201ENST00000306085 DCAF15Q66K64 600 aa14.16□□□□□ -0.14
TRIM56-201ENST00000306085 GPT2Q8TD30 523 aa14.16□□□□□ -0.14
TRIM56-201ENST00000306085 IL17RAQ96F46 866 aa14.16□□□□□ -0.14
TRIM56-201ENST00000306085 HES6Q96HZ4 224 aa14.16□□□□□ -0.14
TRIM56-201ENST00000306085 HDHD2Q9H0R4 259 aa14.16□□□□□ -0.14
TRIM56-201ENST00000306085 CLEC4MQ9H2X3 399 aaPredicted RBP14.16□□□□□ -0.14
TRIM56-201ENST00000306085 NOS1P29475 1434 aa14.16□□□□□ -0.14
TRIM56-201ENST00000306085 KRT76Q01546 638 aa14.16□□□□□ -0.14
TRIM56-201ENST00000306085 PDZK1P1A8MUH7 402 aa14.16□□□□□ -0.14
TRIM56-201ENST00000306085 TLR2O60603 784 aa14.16□□□□□ -0.14
TRIM56-201ENST00000306085 SRGAP2O75044 1071 aa14.16□□□□□ -0.14
TRIM56-201ENST00000306085 SYTL3Q4VX76 610 aa14.16□□□□□ -0.14
TRIM56-201ENST00000306085 KIF2CQ99661 725 aa14.16□□□□□ -0.14
TRIM56-201ENST00000306085 CXorf56Q9H5V9 222 aa14.16□□□□□ -0.14
TRIM56-201ENST00000306085 GGT7Q9UJ14 662 aa14.16□□□□□ -0.14
TRIM56-201ENST00000306085 MLNP12872 115 aa14.15□□□□□ -0.14
TRIM56-201ENST00000306085 CYP27A1Q02318 531 aa14.15□□□□□ -0.14
TRIM56-201ENST00000306085 NFIL3Q16649 462 aa14.15□□□□□ -0.14
TRIM56-201ENST00000306085 KDELC2Q7Z4H8 507 aa14.15□□□□□ -0.14
TRIM56-201ENST00000306085 C11orf96Q7Z7L8 435 aa14.15□□□□□ -0.14
TRIM56-201ENST00000306085 TSPYL6Q8N831 410 aa14.15□□□□□ -0.14
TRIM56-201ENST00000306085 METTL22Q9BUU2 404 aaPredicted RBP14.15□□□□□ -0.14
TRIM56-201ENST00000306085 ZBTB40Q9NUA8 1239 aa14.15□□□□□ -0.14
TRIM56-201ENST00000306085 SNX24Q9Y343 169 aa14.15□□□□□ -0.14
TRIM56-201ENST00000306085 KIF21AQ7Z4S6 1674 aa14.15□□□□□ -0.14
TRIM56-201ENST00000306085 ARL4DP49703 201 aa14.15□□□□□ -0.14
TRIM56-201ENST00000306085 IFNEQ86WN2 208 aa14.15□□□□□ -0.14
TRIM56-201ENST00000306085 OR6B3Q8NGW1 331 aa14.15□□□□□ -0.14
TRIM56-201ENST00000306085 USP17L12C9JPN9 530 aa14.15□□□□□ -0.14
TRIM56-201ENST00000306085 USP17L21D6R901 530 aa14.15□□□□□ -0.14
TRIM56-201ENST00000306085 DDI2Q5TDH0 399 aa14.15□□□□□ -0.14
TRIM56-201ENST00000306085 MDM1Q8TC05 714 aa14.15□□□□□ -0.14
TRIM56-201ENST00000306085 TBC1D22AQ8WUA7 517 aa14.15□□□□□ -0.14
TRIM56-201ENST00000306085 ADAM21Q9UKJ8 722 aa14.15□□□□□ -0.14
TRIM56-201ENST00000306085 ADCY9O60503 1353 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms