RNA–Protein interactions for RNA: ENST00000299866.12

TVP23A-201, Transcript of trans-golgi network vesicle protein 23 homolog A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TVP23A, Length 3,360 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23A-201ENST00000299866 CALUO43852 315 aaPredicted RBP13.99□□□□□ -0.17
TVP23A-201ENST00000299866 TPBGLP0DKB5 382 aa13.99□□□□□ -0.17
TVP23A-201ENST00000299866 CCNB1P14635 433 aa13.99□□□□□ -0.17
TVP23A-201ENST00000299866 ANXA13P27216 316 aa13.99□□□□□ -0.17
TVP23A-201ENST00000299866 PSMC6P62333 389 aa13.99□□□□□ -0.17
TVP23A-201ENST00000299866 RRP1BQ14684 758 aaKnown RBP13.99□□□□□ -0.17
TVP23A-201ENST00000299866 SETDB1Q15047 1291 aa13.99□□□□□ -0.17
TVP23A-201ENST00000299866 SEL1L2Q5TEA6 688 aa13.99□□□□□ -0.17
TVP23A-201ENST00000299866 TXNRD3Q86VQ6 643 aa13.99□□□□□ -0.17
TVP23A-201ENST00000299866 CPNE8Q86YQ8 564 aa13.99□□□□□ -0.17
TVP23A-201ENST00000299866 CYP4X1Q8N118 509 aa13.99□□□□□ -0.17
TVP23A-201ENST00000299866 FAM13CQ8NE31 585 aa13.99□□□□□ -0.17
TVP23A-201ENST00000299866 SUPT20HQ8NEM7 779 aa13.99□□□□□ -0.17
TVP23A-201ENST00000299866 STK32AQ8WU08 396 aa13.99□□□□□ -0.17
TVP23A-201ENST00000299866 C2CD2Q9Y426 696 aa13.99□□□□□ -0.17
TVP23A-201ENST00000299866 MED24O75448 989 aa13.99□□□□□ -0.17
TVP23A-201ENST00000299866 CHKAP35790 457 aa13.99□□□□□ -0.17
TVP23A-201ENST00000299866 RFC5P40937 340 aa13.99□□□□□ -0.17
TVP23A-201ENST00000299866 PEX5P50542 639 aa13.99□□□□□ -0.17
TVP23A-201ENST00000299866 RPS6KA3P51812 740 aa13.99□□□□□ -0.17
TVP23A-201ENST00000299866 ZC3H3Q8IXZ2 948 aaKnown RBP13.99□□□□□ -0.17
TVP23A-201ENST00000299866 ART4Q93070 314 aa13.99□□□□□ -0.17
TVP23A-201ENST00000299866 DHX36Q9H2U1 1008 aaKnown RBP13.99□□□□□ -0.17
TVP23A-201ENST00000299866 IRAK4Q9NWZ3 460 aa13.99□□□□□ -0.17
TVP23A-201ENST00000299866 KDM3AQ9Y4C1 1321 aa13.99□□□□□ -0.17
TVP23A-201ENST00000299866 SFI1A8K8P3 1242 aa13.99□□□□□ -0.17
TVP23A-201ENST00000299866 RSPH10B2B2RC85 870 aa13.99□□□□□ -0.17
TVP23A-201ENST00000299866 ENTPD5O75356 428 aa13.99□□□□□ -0.17
TVP23A-201ENST00000299866 GCNT3O95395 438 aa13.99□□□□□ -0.17
TVP23A-201ENST00000299866 RSPH10BP0C881 870 aa13.99□□□□□ -0.17
TVP23A-201ENST00000299866 PYGMP11217 842 aa13.99□□□□□ -0.17
TVP23A-201ENST00000299866 EPHB2P29323 1055 aa13.99□□□□□ -0.17
TVP23A-201ENST00000299866 COILP38432 576 aaPredicted RBP13.99□□□□□ -0.17
TVP23A-201ENST00000299866 CDK8P49336 464 aa13.99□□□□□ -0.17
TVP23A-201ENST00000299866 POLE2P56282 527 aa13.99□□□□□ -0.17
TVP23A-201ENST00000299866 NBPF20Q3BBV1 942 aa13.99□□□□□ -0.17
TVP23A-201ENST00000299866 RNF220Q5VTB9 566 aa13.99□□□□□ -0.17
TVP23A-201ENST00000299866 LRRC47Q8N1G4 583 aaKnown RBP13.99□□□□□ -0.17
TVP23A-201ENST00000299866 PWWP2AQ96N64 755 aa13.99□□□□□ -0.17
TVP23A-201ENST00000299866 CYP39A1Q9NYL5 469 aa13.99□□□□□ -0.17
TVP23A-201ENST00000299866 PCYOX1Q9UHG3 505 aa13.99□□□□□ -0.17
TVP23A-201ENST00000299866 PCDHA3Q9Y5H8 950 aa13.99□□□□□ -0.17
TVP23A-201ENST00000299866 SYNGAP1Q96PV0 1343 aa13.98□□□□□ -0.17
TVP23A-201ENST00000299866 ESYT2A0FGR8 921 aa13.98□□□□□ -0.17
TVP23A-201ENST00000299866 WFS1O76024 890 aa13.98□□□□□ -0.17
TVP23A-201ENST00000299866 CAMTA2O94983 1202 aa13.98□□□□□ -0.17
TVP23A-201ENST00000299866 ATP6V1C1P21283 382 aa13.98□□□□□ -0.17
TVP23A-201ENST00000299866 FOXN2P32314 431 aa13.98□□□□□ -0.17
TVP23A-201ENST00000299866 VPS41P49754 854 aa13.98□□□□□ -0.17
TVP23A-201ENST00000299866 MRPS35P82673 323 aaKnown RBP13.98□□□□□ -0.17
TVP23A-201ENST00000299866 MUM1Q2TAK8 710 aa13.98□□□□□ -0.17
TVP23A-201ENST00000299866 RNF43Q68DV7 783 aa13.98□□□□□ -0.17
TVP23A-201ENST00000299866 ZNF746Q6NUN9 644 aaPredicted RBP13.98□□□□□ -0.17
TVP23A-201ENST00000299866 OLIG1Q8TAK6 271 aa13.98□□□□□ -0.17
TVP23A-201ENST00000299866 SERPINB12Q96P63 405 aa13.98□□□□□ -0.17
TVP23A-201ENST00000299866 PPP1R12CQ9BZL4 782 aa13.98□□□□□ -0.17
TVP23A-201ENST00000299866 ASIC3Q9UHC3 531 aa13.98□□□□□ -0.17
TVP23A-201ENST00000299866 TRAF3IP3Q9Y228 551 aa13.98□□□□□ -0.17
TVP23A-201ENST00000299866 ZNF142P52746 1687 aaPredicted RBP13.98□□□□□ -0.17
TVP23A-201ENST00000299866 PASKQ96RG2 1323 aa13.98□□□□□ -0.17
TVP23A-201ENST00000299866 PITPNM2Q9BZ72 1349 aa13.98□□□□□ -0.17
TVP23A-201ENST00000299866 RREB1Q92766 1687 aa13.98□□□□□ -0.17
TVP23A-201ENST00000299866 PTDSS1P48651 473 aaKnown RBP13.98□□□□□ -0.17
TVP23A-201ENST00000299866 PPP1R15BQ5SWA1 713 aa13.98□□□□□ -0.17
TVP23A-201ENST00000299866 DNAJC9Q8WXX5 260 aa13.98□□□□□ -0.17
TVP23A-201ENST00000299866 REEP2Q9BRK0 252 aa13.98□□□□□ -0.17
TVP23A-201ENST00000299866 KIAA1683Q9H0B3 1180 aa13.98□□□□□ -0.17
TVP23A-201ENST00000299866 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.98□□□□□ -0.17
TVP23A-201ENST00000299866 COMTP21964 271 aa13.97□□□□□ -0.17
TVP23A-201ENST00000299866 ATP5DP30049 168 aa13.97□□□□□ -0.17
TVP23A-201ENST00000299866 KLC1Q07866 573 aa13.97□□□□□ -0.17
TVP23A-201ENST00000299866 DNAJC3Q13217 504 aa13.97□□□□□ -0.17
TVP23A-201ENST00000299866 MTFR1Q15390 333 aa13.97□□□□□ -0.17
TVP23A-201ENST00000299866 TSNAXIP1Q2TAA8 658 aa13.97□□□□□ -0.17
TVP23A-201ENST00000299866 ARMC3Q5W041 872 aa13.97□□□□□ -0.17
TVP23A-201ENST00000299866 TRMT10CQ7L0Y3 403 aaKnown RBP13.97□□□□□ -0.17
TVP23A-201ENST00000299866 CCDC24Q8N4L8 307 aa13.97□□□□□ -0.17
TVP23A-201ENST00000299866 C1orf54Q8WWF1 131 aa13.97□□□□□ -0.17
TVP23A-201ENST00000299866 SPOCK2Q92563 424 aa13.97□□□□□ -0.17
TVP23A-201ENST00000299866 METTL14Q9HCE5 456 aaKnown RBP13.97□□□□□ -0.17
TVP23A-201ENST00000299866 ATMINO43313 823 aaPredicted RBP13.97□□□□□ -0.17
TVP23A-201ENST00000299866 TAC1P20366 129 aa13.97□□□□□ -0.17
TVP23A-201ENST00000299866 RPL13P26373 211 aaKnown RBP13.97□□□□□ -0.17
TVP23A-201ENST00000299866 TRAF1Q13077 416 aa13.97□□□□□ -0.17
TVP23A-201ENST00000299866 GIT2Q14161 759 aa13.97□□□□□ -0.17
TVP23A-201ENST00000299866 GRIK5Q16478 980 aa13.97□□□□□ -0.17
TVP23A-201ENST00000299866 CLEC10AQ8IUN9 316 aa13.97□□□□□ -0.17
TVP23A-201ENST00000299866 MFN1Q8IWA4 741 aa13.97□□□□□ -0.17
TVP23A-201ENST00000299866 SLC20A1Q8WUM9 679 aa13.97□□□□□ -0.17
TVP23A-201ENST00000299866 UCMAQ8WVF2 138 aa13.97□□□□□ -0.17
TVP23A-201ENST00000299866 BTBD6Q96KE9 485 aa13.97□□□□□ -0.17
TVP23A-201ENST00000299866 STK33Q9BYT3 514 aa13.97□□□□□ -0.17
TVP23A-201ENST00000299866 CCDC87Q9NVE4 849 aa13.97□□□□□ -0.17
TVP23A-201ENST00000299866 MTUS1Q9ULD2 1270 aa13.97□□□□□ -0.17
TVP23A-201ENST00000299866 COL5A2P05997 1499 aaPredicted RBP13.97□□□□□ -0.17
TVP23A-201ENST00000299866 ANKRD62A6NC57 917 aa13.97□□□□□ -0.17
TVP23A-201ENST00000299866 THAP12O43422 761 aa13.97□□□□□ -0.17
TVP23A-201ENST00000299866 SPAG7O75391 227 aa13.97□□□□□ -0.17
TVP23A-201ENST00000299866 CBX6O95503 412 aa13.97□□□□□ -0.17
TVP23A-201ENST00000299866 LDHBP07195 334 aaKnown RBP13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms