RNA–Protein interactions for RNA: ENST00000299333.7

SCN3B-201, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 5,665 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-201ENST00000299333 MTF1Q14872 753 aa15.75■□□□□ 0.11
SCN3B-201ENST00000299333 DAB2IPQ5VWQ8 1189 aa15.75■□□□□ 0.11
SCN3B-201ENST00000299333 IZUMO3Q5VZ72 239 aa15.75■□□□□ 0.11
SCN3B-201ENST00000299333 ATP11CQ8NB49 1132 aa15.75■□□□□ 0.11
SCN3B-201ENST00000299333 TMA16Q96EY4 203 aaKnown RBP15.75■□□□□ 0.11
SCN3B-201ENST00000299333 WDR11Q9BZH6 1224 aa15.75■□□□□ 0.11
SCN3B-201ENST00000299333 TRABDQ9H4I3 376 aa15.75■□□□□ 0.11
SCN3B-201ENST00000299333 CCDC134Q9H6E4 229 aa15.75■□□□□ 0.11
SCN3B-201ENST00000299333 ASXL2Q76L83 1435 aa15.75■□□□□ 0.11
SCN3B-201ENST00000299333 MAPRE2Q15555 327 aa15.75■□□□□ 0.11
SCN3B-201ENST00000299333 RNF135Q8IUD6 432 aa15.75■□□□□ 0.11
SCN3B-201ENST00000299333 ST13P5Q8NFI4 369 aaPredicted RBP15.75■□□□□ 0.11
SCN3B-201ENST00000299333 ULK4Q96C45 1275 aa15.75■□□□□ 0.11
SCN3B-201ENST00000299333 THTPAQ9BU02 230 aa15.75■□□□□ 0.11
SCN3B-201ENST00000299333 BEGAINQ9BUH8 593 aa15.75■□□□□ 0.11
SCN3B-201ENST00000299333 BRIP1Q9BX63 1249 aa15.75■□□□□ 0.11
SCN3B-201ENST00000299333 M0R3G1 203 aa15.75■□□□□ 0.11
SCN3B-201ENST00000299333 RPS6P62753 249 aaKnown RBP15.75■□□□□ 0.11
SCN3B-201ENST00000299333 INAQ16352 499 aa15.75■□□□□ 0.11
SCN3B-201ENST00000299333 OTULINQ96BN8 352 aa15.75■□□□□ 0.11
SCN3B-201ENST00000299333 OPTNQ96CV9 577 aa15.75■□□□□ 0.11
SCN3B-201ENST00000299333 PRPF18Q99633 342 aaKnown RBP15.75■□□□□ 0.11
SCN3B-201ENST00000299333 MCM8Q9UJA3 840 aa15.75■□□□□ 0.11
SCN3B-201ENST00000299333 CCNL1Q9UK58 526 aaPredicted RBP15.75■□□□□ 0.11
SCN3B-201ENST00000299333 TCP10L2B9ZVM9 353 aa15.75■□□□□ 0.11
SCN3B-201ENST00000299333 PRPF3O43395 683 aaKnown RBP15.75■□□□□ 0.11
SCN3B-201ENST00000299333 ATP6V1B1P15313 513 aa15.75■□□□□ 0.11
SCN3B-201ENST00000299333 PRCPP42785 496 aa15.75■□□□□ 0.11
SCN3B-201ENST00000299333 WASHC5Q12768 1159 aa15.75■□□□□ 0.11
SCN3B-201ENST00000299333 BYSLQ13895 437 aaKnown RBP15.75■□□□□ 0.11
SCN3B-201ENST00000299333 UBE2SQ16763 222 aa15.75■□□□□ 0.11
SCN3B-201ENST00000299333 ARL13BQ3SXY8 428 aa15.75■□□□□ 0.11
SCN3B-201ENST00000299333 ZNF507Q8TCN5 953 aa15.75■□□□□ 0.11
SCN3B-201ENST00000299333 PARVBQ9HBI1 364 aa15.75■□□□□ 0.11
SCN3B-201ENST00000299333 GJB4Q9NTQ9 266 aa15.75■□□□□ 0.11
SCN3B-201ENST00000299333 ARHGEF10O15013 1369 aa15.75■□□□□ 0.11
SCN3B-201ENST00000299333 TTC26A0AVF1 554 aa15.74■□□□□ 0.11
SCN3B-201ENST00000299333 AGTP01019 485 aa15.74■□□□□ 0.11
SCN3B-201ENST00000299333 TRIM16LQ309B1 348 aa15.74■□□□□ 0.11
SCN3B-201ENST00000299333 DNAL1Q4LDG9 190 aa15.74■□□□□ 0.11
SCN3B-201ENST00000299333 FSD1LQ9BXM9 530 aa15.74■□□□□ 0.11
SCN3B-201ENST00000299333 VIPAS39Q9H9C1 493 aa15.74■□□□□ 0.11
SCN3B-201ENST00000299333 BNIP3LO60238 219 aa15.74■□□□□ 0.11
SCN3B-201ENST00000299333 TYK2P29597 1187 aa15.74■□□□□ 0.11
SCN3B-201ENST00000299333 CORO7P57737 925 aa15.74■□□□□ 0.11
SCN3B-201ENST00000299333 NCAPG2Q86XI2 1143 aa15.74■□□□□ 0.11
SCN3B-201ENST00000299333 SULF1Q8IWU6 871 aa15.74■□□□□ 0.11
SCN3B-201ENST00000299333 PUS3Q9BZE2 481 aaKnown RBP15.74■□□□□ 0.11
SCN3B-201ENST00000299333 KLHL25Q9H0H3 589 aa15.74■□□□□ 0.11
SCN3B-201ENST00000299333 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.74■□□□□ 0.11
SCN3B-201ENST00000299333 NFIBO00712 420 aa15.74■□□□□ 0.11
SCN3B-201ENST00000299333 PRR29P0C7W0 189 aa15.74■□□□□ 0.11
SCN3B-201ENST00000299333 RFX1P22670 979 aa15.74■□□□□ 0.11
SCN3B-201ENST00000299333 LSP1P33241 339 aa15.74■□□□□ 0.11
SCN3B-201ENST00000299333 CTTNQ14247 550 aaKnown RBP15.74■□□□□ 0.11
SCN3B-201ENST00000299333 FASTKD1Q53R41 847 aaKnown RBP15.74■□□□□ 0.11
SCN3B-201ENST00000299333 CLEC4FQ8N1N0 589 aa15.74■□□□□ 0.11
SCN3B-201ENST00000299333 STX19Q8N4C7 294 aa15.74■□□□□ 0.11
SCN3B-201ENST00000299333 IRX2Q9BZI1 471 aaPredicted RBP15.74■□□□□ 0.11
SCN3B-201ENST00000299333 IGF2BP3O00425 579 aaKnown RBP eCLIP15.74■□□□□ 0.11
SCN3B-201ENST00000299333 PIK3R2O00459 728 aa15.74■□□□□ 0.11
SCN3B-201ENST00000299333 ENO3P13929 434 aaPredicted RBP15.74■□□□□ 0.11
SCN3B-201ENST00000299333 TFDP2Q14188 446 aa15.74■□□□□ 0.11
SCN3B-201ENST00000299333 CDC37Q16543 378 aaPredicted RBP15.74■□□□□ 0.11
SCN3B-201ENST00000299333 METTL23Q86XA0 190 aa15.74■□□□□ 0.11
SCN3B-201ENST00000299333 CCDC103Q8IW40 242 aa15.74■□□□□ 0.11
SCN3B-201ENST00000299333 HPCAL4Q9UM19 191 aa15.74■□□□□ 0.11
SCN3B-201ENST00000299333 NEMP1O14524 444 aa15.74■□□□□ 0.11
SCN3B-201ENST00000299333 DDHD2O94830 711 aa15.74■□□□□ 0.11
SCN3B-201ENST00000299333 ANKMY2Q8IV38 441 aa15.74■□□□□ 0.11
SCN3B-201ENST00000299333 NUP93Q8N1F7 819 aa15.74■□□□□ 0.11
SCN3B-201ENST00000299333 ATXN7L3BQ96GX2 97 aa15.74■□□□□ 0.11
SCN3B-201ENST00000299333 MTRQ99707 1265 aa15.74■□□□□ 0.11
SCN3B-201ENST00000299333 AS3MTQ9HBK9 375 aa15.74■□□□□ 0.11
SCN3B-201ENST00000299333 NOD2Q9HC29 1040 aa15.74■□□□□ 0.11
SCN3B-201ENST00000299333 TRIM39Q9HCM9 518 aa15.74■□□□□ 0.11
SCN3B-201ENST00000299333 DBR1Q9UK59 544 aaKnown RBP15.74■□□□□ 0.11
SCN3B-201ENST00000299333 LZTS3O60299 673 aaPredicted RBP15.73■□□□□ 0.11
SCN3B-201ENST00000299333 PPARGP37231 505 aaPredicted RBP15.73■□□□□ 0.11
SCN3B-201ENST00000299333 KRT17Q04695 432 aa15.73■□□□□ 0.11
SCN3B-201ENST00000299333 LONRF1Q17RB8 773 aa15.73■□□□□ 0.11
SCN3B-201ENST00000299333 FAM83BQ5T0W9 1011 aa15.73■□□□□ 0.11
SCN3B-201ENST00000299333 GPATCH4Q5T3I0 446 aaKnown RBP15.73■□□□□ 0.11
SCN3B-201ENST00000299333 XPO6Q96QU8 1125 aaKnown RBP15.73■□□□□ 0.11
SCN3B-201ENST00000299333 C11orf70Q9BRQ4 267 aa15.73■□□□□ 0.11
SCN3B-201ENST00000299333 TSSK1BQ9BXA7 367 aa15.73■□□□□ 0.11
SCN3B-201ENST00000299333 ADGBQ8N7X0 1667 aa15.73■□□□□ 0.11
SCN3B-201ENST00000299333 KAT6BQ8WYB5 2073 aa15.73■□□□□ 0.11
SCN3B-201ENST00000299333 ZSCAN20P17040 1043 aaPredicted RBP15.73■□□□□ 0.11
SCN3B-201ENST00000299333 MARK3P27448 753 aa15.73■□□□□ 0.11
SCN3B-201ENST00000299333 OR2W6PQ8NHA6 318 aa15.73■□□□□ 0.11
SCN3B-201ENST00000299333 KCNF1Q9H3M0 494 aa15.73■□□□□ 0.11
SCN3B-201ENST00000299333 SYTL2Q9HCH5 934 aa15.73■□□□□ 0.11
SCN3B-201ENST00000299333 SARS2Q9NP81 518 aaKnown RBP15.73■□□□□ 0.11
SCN3B-201ENST00000299333 MARCOQ9UEW3 520 aaPredicted RBP15.73■□□□□ 0.11
SCN3B-201ENST00000299333 SEPT3Q9UH03 358 aa15.73■□□□□ 0.11
SCN3B-201ENST00000299333 PCP4L1A6NKN8 68 aa15.73■□□□□ 0.11
SCN3B-201ENST00000299333 PRKAB2O43741 272 aa15.73■□□□□ 0.11
SCN3B-201ENST00000299333 HORMAD1Q86X24 394 aa15.73■□□□□ 0.11
SCN3B-201ENST00000299333 MS4A14Q96JA4 679 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms