RNA–Protein interactions for RNA: ENST00000297071.8

TRA2A-201, Transcript of transformer 2 alpha homolog, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRA2A, Length 1,845 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-201ENST00000297071 HLA-DOAP06340 250 aa20.64■□□□□ 0.9
TRA2A-201ENST00000297071 RSPH10BP0C881 870 aa20.64■□□□□ 0.9
TRA2A-201ENST00000297071 SLC16A2P36021 539 aa20.64■□□□□ 0.9
TRA2A-201ENST00000297071 MYL7Q01449 175 aa20.64■□□□□ 0.9
TRA2A-201ENST00000297071 SYDE1Q6ZW31 735 aaPredicted RBP20.64■□□□□ 0.9
TRA2A-201ENST00000297071 TBC1D16Q8TBP0 767 aa20.64■□□□□ 0.9
TRA2A-201ENST00000297071 CD101Q93033 1021 aa20.64■□□□□ 0.9
TRA2A-201ENST00000297071 SEMA4AQ9H3S1 761 aa20.64■□□□□ 0.9
TRA2A-201ENST00000297071 MSH4O15457 936 aa20.64■□□□□ 0.89
TRA2A-201ENST00000297071 RTN2O75298 545 aa20.64■□□□□ 0.89
TRA2A-201ENST00000297071 SUN1O94901 812 aa20.64■□□□□ 0.89
TRA2A-201ENST00000297071 NQO1P15559 274 aaKnown RBP20.64■□□□□ 0.89
TRA2A-201ENST00000297071 COILP38432 576 aaPredicted RBP20.64■□□□□ 0.89
TRA2A-201ENST00000297071 SKIV2L2P42285 1042 aaKnown RBP20.64■□□□□ 0.89
TRA2A-201ENST00000297071 IFI35P80217 286 aaPredicted RBP20.64■□□□□ 0.89
TRA2A-201ENST00000297071 KCTD1Q719H9 257 aa20.64■□□□□ 0.89
TRA2A-201ENST00000297071 LMO3Q8TAP4 145 aa20.64■□□□□ 0.89
TRA2A-201ENST00000297071 ARHGEF1Q92888 912 aaKnown RBP20.64■□□□□ 0.89
TRA2A-201ENST00000297071 PRMT1Q99873 361 aaKnown RBP20.64■□□□□ 0.89
TRA2A-201ENST00000297071 HSD17B14Q9BPX1 270 aa20.64■□□□□ 0.89
TRA2A-201ENST00000297071 ELAC2Q9BQ52 826 aaKnown RBP20.64■□□□□ 0.89
TRA2A-201ENST00000297071 PARVGQ9HBI0 331 aa20.64■□□□□ 0.89
TRA2A-201ENST00000297071 PIK3CDO00329 1044 aa20.63■□□□□ 0.89
TRA2A-201ENST00000297071 MEIS1O00470 390 aa20.63■□□□□ 0.89
TRA2A-201ENST00000297071 OPLAHO14841 1288 aa20.63■□□□□ 0.89
TRA2A-201ENST00000297071 GNPATO15228 680 aa20.63■□□□□ 0.89
TRA2A-201ENST00000297071 GJB6O95452 261 aa20.63■□□□□ 0.89
TRA2A-201ENST00000297071 KRT13P13646 458 aa20.63■□□□□ 0.89
TRA2A-201ENST00000297071 ABCB4P21439 1286 aa20.63■□□□□ 0.89
TRA2A-201ENST00000297071 EIF6P56537 245 aaKnown RBP20.63■□□□□ 0.89
TRA2A-201ENST00000297071 CCDC137Q6PK04 289 aaKnown RBP20.63■□□□□ 0.89
TRA2A-201ENST00000297071 ZNF720Q7Z2F6 126 aa20.63■□□□□ 0.89
TRA2A-201ENST00000297071 CNBD1Q8NA66 436 aa20.63■□□□□ 0.89
TRA2A-201ENST00000297071 FIZ1Q96SL8 496 aa20.63■□□□□ 0.89
TRA2A-201ENST00000297071 STRA6Q9BX79 667 aa20.63■□□□□ 0.89
TRA2A-201ENST00000297071 LRRC19Q9H756 370 aa20.63■□□□□ 0.89
TRA2A-201ENST00000297071 ZNFX1Q9P2E3 1918 aaKnown RBP20.63■□□□□ 0.89
TRA2A-201ENST00000297071 TLDC2A0PJX2 215 aa20.62■□□□□ 0.89
TRA2A-201ENST00000297071 VIMP08670 466 aaKnown RBP20.62■□□□□ 0.89
TRA2A-201ENST00000297071 CCND1P24385 295 aa20.62■□□□□ 0.89
TRA2A-201ENST00000297071 BNIP1Q12981 228 aa20.62■□□□□ 0.89
TRA2A-201ENST00000297071 TRAF1Q13077 416 aa20.62■□□□□ 0.89
TRA2A-201ENST00000297071 SLC13A5Q86YT5 568 aaPredicted RBP20.62■□□□□ 0.89
TRA2A-201ENST00000297071 C12orf56Q8IXR9 622 aa20.62■□□□□ 0.89
TRA2A-201ENST00000297071 RPGRQ92834 1020 aaKnown RBP20.62■□□□□ 0.89
TRA2A-201ENST00000297071 C18orf8Q96DM3 657 aa20.62■□□□□ 0.89
TRA2A-201ENST00000297071 RBM17Q96I25 401 aaKnown RBP20.62■□□□□ 0.89
TRA2A-201ENST00000297071 L3MBTL3Q96JM7 780 aaPredicted RBP20.62■□□□□ 0.89
TRA2A-201ENST00000297071 IFT74Q96LB3 600 aa20.62■□□□□ 0.89
TRA2A-201ENST00000297071 AGPAT3Q9NRZ7 376 aa20.62■□□□□ 0.89
TRA2A-201ENST00000297071 EPB41L3Q9Y2J2 1087 aaPredicted RBP20.62■□□□□ 0.89
TRA2A-201ENST00000297071 RGPD3A6NKT7 1758 aaPredicted RBP20.62■□□□□ 0.89
TRA2A-201ENST00000297071 RGPD4Q7Z3J3 1758 aa20.62■□□□□ 0.89
TRA2A-201ENST00000297071 MAPK13O15264 365 aa20.62■□□□□ 0.89
TRA2A-201ENST00000297071 WFS1O76024 890 aa20.62■□□□□ 0.89
TRA2A-201ENST00000297071 MAN1A1P33908 653 aa20.62■□□□□ 0.89
TRA2A-201ENST00000297071 NCALDP61601 193 aa20.62■□□□□ 0.89
TRA2A-201ENST00000297071 CAV1Q03135 178 aa20.62■□□□□ 0.89
TRA2A-201ENST00000297071 CCDC15Q0P6D6 951 aa20.62■□□□□ 0.89
TRA2A-201ENST00000297071 BFSP1Q12934 665 aa20.62■□□□□ 0.89
TRA2A-201ENST00000297071 CBWD6Q4V339 395 aa20.62■□□□□ 0.89
TRA2A-201ENST00000297071 CBWD3Q5JTY5 395 aa20.62■□□□□ 0.89
TRA2A-201ENST00000297071 CBWD5Q5RIA9 395 aa20.62■□□□□ 0.89
TRA2A-201ENST00000297071 TTC27Q6P3X3 843 aa20.62■□□□□ 0.89
TRA2A-201ENST00000297071 EXOC3L1Q86VI1 746 aa20.62■□□□□ 0.89
TRA2A-201ENST00000297071 CCDC24Q8N4L8 307 aa20.62■□□□□ 0.89
TRA2A-201ENST00000297071 GRAMD1AQ96CP6 724 aa20.62■□□□□ 0.89
TRA2A-201ENST00000297071 DDX4Q9NQI0 724 aaKnown RBP20.62■□□□□ 0.89
TRA2A-201ENST00000297071 BAIAP2L1Q9UHR4 511 aa20.62■□□□□ 0.89
TRA2A-201ENST00000297071 C15orf41Q9Y2V0 281 aa20.62■□□□□ 0.89
TRA2A-201ENST00000297071 FAM86B1E9PN63 330 aa20.61■□□□□ 0.89
TRA2A-201ENST00000297071 FAM86B2P0C5J1 330 aa20.61■□□□□ 0.89
TRA2A-201ENST00000297071 RARAP10276 462 aa20.61■□□□□ 0.89
TRA2A-201ENST00000297071 MAPTP10636 758 aaKnown RBP20.61■□□□□ 0.89
TRA2A-201ENST00000297071 CETN1Q12798 172 aa20.61■□□□□ 0.89
TRA2A-201ENST00000297071 PPP2R5CQ13362 524 aa20.61■□□□□ 0.89
TRA2A-201ENST00000297071 ZNF211Q13398 564 aaPredicted RBP20.61■□□□□ 0.89
TRA2A-201ENST00000297071 ALCAMQ13740 583 aa20.61■□□□□ 0.89
TRA2A-201ENST00000297071 CCDC125Q86Z20 511 aa20.61■□□□□ 0.89
TRA2A-201ENST00000297071 CLEC10AQ8IUN9 316 aa20.61■□□□□ 0.89
TRA2A-201ENST00000297071 MYCT1Q8N699 235 aa20.61■□□□□ 0.89
TRA2A-201ENST00000297071 MAIP1Q8WWC4 291 aa20.61■□□□□ 0.89
TRA2A-201ENST00000297071 GPR101Q96P66 508 aaPredicted RBP20.61■□□□□ 0.89
TRA2A-201ENST00000297071 P2RX7Q99572 595 aaKnown RBP20.61■□□□□ 0.89
TRA2A-201ENST00000297071 NOP53Q9NZM5 478 aaKnown RBP20.61■□□□□ 0.89
TRA2A-201ENST00000297071 CTTNBP2NLQ9P2B4 639 aa20.61■□□□□ 0.89
TRA2A-201ENST00000297071 ARL2BPQ9Y2Y0 163 aa20.61■□□□□ 0.89
TRA2A-201ENST00000297071 ATP2C2O75185 946 aa20.6■□□□□ 0.89
TRA2A-201ENST00000297071 HOXA10P31260 410 aaPredicted RBP20.6■□□□□ 0.89
TRA2A-201ENST00000297071 CCNG1P51959 295 aa20.6■□□□□ 0.89
TRA2A-201ENST00000297071 KCNA1Q09470 495 aa20.6■□□□□ 0.89
TRA2A-201ENST00000297071 SIX1Q15475 284 aaPredicted RBP20.6■□□□□ 0.89
TRA2A-201ENST00000297071 SLFN13Q68D06 897 aa20.6■□□□□ 0.89
TRA2A-201ENST00000297071 RHBDF2Q6PJF5 856 aa20.6■□□□□ 0.89
TRA2A-201ENST00000297071 HHIPL2Q6UWX4 724 aa20.6■□□□□ 0.89
TRA2A-201ENST00000297071 FBXO11Q86XK2 927 aa20.6■□□□□ 0.89
TRA2A-201ENST00000297071 EPS8L3Q8TE67 593 aaKnown RBP20.6■□□□□ 0.89
TRA2A-201ENST00000297071 CKAP2Q8WWK9 683 aa20.6■□□□□ 0.89
TRA2A-201ENST00000297071 PLVAPQ9BX97 442 aa20.6■□□□□ 0.89
TRA2A-201ENST00000297071 COA1Q9GZY4 146 aa20.6■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms