RNA–Protein interactions for RNA: ENST00000295057.3

LRRTM1-201, Transcript of leucine rich repeat transmembrane neuronal 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRRTM1, Length 2,599 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1-201ENST00000295057 SH3GL3Q99963 347 aa16.53■□□□□ 0.24
LRRTM1-201ENST00000295057 EDEM3Q9BZQ6 932 aa16.53■□□□□ 0.24
LRRTM1-201ENST00000295057 ZHX2Q9Y6X8 837 aa16.53■□□□□ 0.24
LRRTM1-201ENST00000295057 ANKRD33BA6NCL7 494 aa16.52■□□□□ 0.24
LRRTM1-201ENST00000295057 WDR46O15213 610 aaKnown RBP16.52■□□□□ 0.24
LRRTM1-201ENST00000295057 SHBGP04278 402 aa16.52■□□□□ 0.24
LRRTM1-201ENST00000295057 CYP3A4P08684 503 aa16.52■□□□□ 0.24
LRRTM1-201ENST00000295057 LRRC63Q05C16 580 aa16.52■□□□□ 0.24
LRRTM1-201ENST00000295057 ADCY2Q08462 1091 aa16.52■□□□□ 0.24
LRRTM1-201ENST00000295057 COASYQ13057 564 aa16.52■□□□□ 0.24
LRRTM1-201ENST00000295057 CTTNQ14247 550 aaKnown RBP16.52■□□□□ 0.24
LRRTM1-201ENST00000295057 FAM133BQ5BKY9 247 aaKnown RBP16.52■□□□□ 0.24
LRRTM1-201ENST00000295057 HYIQ5T013 277 aa16.52■□□□□ 0.24
LRRTM1-201ENST00000295057 ATP8A1Q9Y2Q0 1164 aa16.52■□□□□ 0.24
LRRTM1-201ENST00000295057 DDX39AO00148 427 aaKnown RBP16.52■□□□□ 0.23
LRRTM1-201ENST00000295057 FGFR1OPO95684 399 aaKnown RBP16.52■□□□□ 0.23
LRRTM1-201ENST00000295057 ZBTB48P10074 688 aaPredicted RBP16.52■□□□□ 0.23
LRRTM1-201ENST00000295057 CHN1P15882 459 aa16.52■□□□□ 0.23
LRRTM1-201ENST00000295057 CYP11B2P19099 503 aa16.52■□□□□ 0.23
LRRTM1-201ENST00000295057 HMGCS2P54868 508 aa16.52■□□□□ 0.23
LRRTM1-201ENST00000295057 CCDC63Q8NA47 563 aa16.52■□□□□ 0.23
LRRTM1-201ENST00000295057 ACTRT1Q8TDG2 376 aa16.52■□□□□ 0.23
LRRTM1-201ENST00000295057 ZNF317Q96PQ6 595 aaPredicted RBP16.52■□□□□ 0.23
LRRTM1-201ENST00000295057 FAM129AQ9BZQ8 928 aa16.52■□□□□ 0.23
LRRTM1-201ENST00000295057 PANK4Q9NVE7 773 aa16.52■□□□□ 0.23
LRRTM1-201ENST00000295057 ATAD5Q96QE3 1844 aa16.52■□□□□ 0.23
LRRTM1-201ENST00000295057 PGRMC1O00264 195 aaKnown RBP16.51■□□□□ 0.23
LRRTM1-201ENST00000295057 TRAF5O00463 557 aa16.51■□□□□ 0.23
LRRTM1-201ENST00000295057 PTPRAP18433 802 aa16.51■□□□□ 0.23
LRRTM1-201ENST00000295057 MTMR3Q13615 1198 aa16.51■□□□□ 0.23
LRRTM1-201ENST00000295057 PIGOQ8TEQ8 1089 aa16.51■□□□□ 0.23
LRRTM1-201ENST00000295057 SYN2Q92777 582 aaPredicted RBP16.51■□□□□ 0.23
LRRTM1-201ENST00000295057 ATG4CQ96DT6 458 aa16.51■□□□□ 0.23
LRRTM1-201ENST00000295057 TRIM51Q9BSJ1 452 aa16.51■□□□□ 0.23
LRRTM1-201ENST00000295057 GGT7Q9UJ14 662 aa16.51■□□□□ 0.23
LRRTM1-201ENST00000295057 SLC12A4Q9UP95 1085 aa16.51■□□□□ 0.23
LRRTM1-201ENST00000295057 RIPK3Q9Y572 518 aa16.51■□□□□ 0.23
LRRTM1-201ENST00000295057 COL4A3BPQ9Y5P4 624 aa16.51■□□□□ 0.23
LRRTM1-201ENST00000295057 PVALEFA0A1B0GWK0 134 aa16.51■□□□□ 0.23
LRRTM1-201ENST00000295057 EME2A4GXA9 379 aaPredicted RBP16.51■□□□□ 0.23
LRRTM1-201ENST00000295057 ANP32DO95626 131 aa16.51■□□□□ 0.23
LRRTM1-201ENST00000295057 LMNB1P20700 586 aa16.51■□□□□ 0.23
LRRTM1-201ENST00000295057 SLC12A3P55017 1021 aa16.51■□□□□ 0.23
LRRTM1-201ENST00000295057 PTK2Q05397 1052 aa16.51■□□□□ 0.23
LRRTM1-201ENST00000295057 FAM43BQ6ZT52 329 aaPredicted RBP16.51■□□□□ 0.23
LRRTM1-201ENST00000295057 SCYL3Q8IZE3 742 aa16.51■□□□□ 0.23
LRRTM1-201ENST00000295057 LRRC57Q8N9N7 239 aa16.51■□□□□ 0.23
LRRTM1-201ENST00000295057 P3H4Q92791 437 aa16.51■□□□□ 0.23
LRRTM1-201ENST00000295057 TLCD1Q96CP7 247 aa16.51■□□□□ 0.23
LRRTM1-201ENST00000295057 FAM20AQ96MK3 541 aa16.51■□□□□ 0.23
LRRTM1-201ENST00000295057 EIF2AK1Q9BQI3 630 aaKnown RBP16.51■□□□□ 0.23
LRRTM1-201ENST00000295057 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.51■□□□□ 0.23
LRRTM1-201ENST00000295057 NT5C3AQ9H0P0 336 aa16.51■□□□□ 0.23
LRRTM1-201ENST00000295057 EBF2Q9HAK2 575 aa16.51■□□□□ 0.23
LRRTM1-201ENST00000295057 KIF9Q9HAQ2 790 aa16.51■□□□□ 0.23
LRRTM1-201ENST00000295057 SLC38A10Q9HBR0 1119 aa16.51■□□□□ 0.23
LRRTM1-201ENST00000295057 AGAP1Q9UPQ3 857 aa16.51■□□□□ 0.23
LRRTM1-201ENST00000295057 KDM3AQ9Y4C1 1321 aa16.5■□□□□ 0.23
LRRTM1-201ENST00000295057 PEX10O60683 326 aa16.5■□□□□ 0.23
LRRTM1-201ENST00000295057 MMEP08473 750 aa16.5■□□□□ 0.23
LRRTM1-201ENST00000295057 ITGB5P18084 799 aa16.5■□□□□ 0.23
LRRTM1-201ENST00000295057 CEP55Q53EZ4 464 aa16.5■□□□□ 0.23
LRRTM1-201ENST00000295057 OTOP1Q7RTM1 612 aa16.5■□□□□ 0.23
LRRTM1-201ENST00000295057 NELFCDQ8IXH7 590 aa16.5■□□□□ 0.23
LRRTM1-201ENST00000295057 LPAR1Q92633 364 aa16.5■□□□□ 0.23
LRRTM1-201ENST00000295057 SPDL1Q96EA4 605 aa16.5■□□□□ 0.23
LRRTM1-201ENST00000295057 PBKQ96KB5 322 aa16.5■□□□□ 0.23
LRRTM1-201ENST00000295057 CALR3Q96L12 384 aaKnown RBP16.5■□□□□ 0.23
LRRTM1-201ENST00000295057 SELENOSQ9BQE4 189 aa16.5■□□□□ 0.23
LRRTM1-201ENST00000295057 BATF3Q9NR55 127 aa16.5■□□□□ 0.23
LRRTM1-201ENST00000295057 SMIM23A6NLE4 172 aa16.5■□□□□ 0.23
LRRTM1-201ENST00000295057 TBX3O15119 743 aa16.5■□□□□ 0.23
LRRTM1-201ENST00000295057 ACTN1P12814 892 aa16.5■□□□□ 0.23
LRRTM1-201ENST00000295057 BACE1P56817 501 aa16.5■□□□□ 0.23
LRRTM1-201ENST00000295057 ASIC2Q16515 512 aa16.5■□□□□ 0.23
LRRTM1-201ENST00000295057 ZNF571Q7Z3V5 609 aaPredicted RBP16.5■□□□□ 0.23
LRRTM1-201ENST00000295057 TPH2Q8IWU9 490 aa16.5■□□□□ 0.23
LRRTM1-201ENST00000295057 LRRC34Q8IZ02 419 aa16.5■□□□□ 0.23
LRRTM1-201ENST00000295057 GPC2Q8N158 579 aa16.5■□□□□ 0.23
LRRTM1-201ENST00000295057 NUCKS1Q9H1E3 243 aaKnown RBP16.5■□□□□ 0.23
LRRTM1-201ENST00000295057 PICK1Q9NRD5 415 aa16.5■□□□□ 0.23
LRRTM1-201ENST00000295057 ETAA1Q9NY74 926 aa16.5■□□□□ 0.23
LRRTM1-201ENST00000295057 PPP1R9AQ9ULJ8 1098 aa16.5■□□□□ 0.23
LRRTM1-201ENST00000295057 NR2E1Q9Y466 385 aa16.5■□□□□ 0.23
LRRTM1-201ENST00000295057 FAM170AA1A519 330 aa16.49■□□□□ 0.23
LRRTM1-201ENST00000295057 RSPH10B2B2RC85 870 aa16.49■□□□□ 0.23
LRRTM1-201ENST00000295057 CES2O00748 559 aa16.49■□□□□ 0.23
LRRTM1-201ENST00000295057 KRT18P05783 430 aaKnown RBP16.49■□□□□ 0.23
LRRTM1-201ENST00000295057 RSPH10BP0C881 870 aa16.49■□□□□ 0.23
LRRTM1-201ENST00000295057 RPA1P27694 616 aa16.49■□□□□ 0.23
LRRTM1-201ENST00000295057 HERC4Q5GLZ8 1057 aaPredicted RBP16.49■□□□□ 0.23
LRRTM1-201ENST00000295057 TAX1BP1Q86VP1 789 aa16.49■□□□□ 0.23
LRRTM1-201ENST00000295057 ZNF280CQ8ND82 737 aa16.49■□□□□ 0.23
LRRTM1-201ENST00000295057 AGAP11Q8TF27 550 aa16.49■□□□□ 0.23
LRRTM1-201ENST00000295057 DYDC2Q96IM9 177 aa16.49■□□□□ 0.23
LRRTM1-201ENST00000295057 TSG101Q99816 390 aa16.49■□□□□ 0.23
LRRTM1-201ENST00000295057 ELAC2Q9BQ52 826 aaKnown RBP16.49■□□□□ 0.23
LRRTM1-201ENST00000295057 WDR11Q9BZH6 1224 aa16.49■□□□□ 0.23
LRRTM1-201ENST00000295057 BHMT2Q9H2M3 363 aa16.49■□□□□ 0.23
LRRTM1-201ENST00000295057 ADAM7Q9H2U9 754 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms