RNA–Protein interactions for RNA: ENST00000291547.9

PKNOX1-201, Transcript of PBX/knotted 1 homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PKNOX1, Length 5,003 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-201ENST00000291547 MOV10L1Q9BXT6 1211 aaKnown RBP11.42□□□□□ -0.58
PKNOX1-201ENST00000291547 ABHD10Q9NUJ1 306 aa11.42□□□□□ -0.58
PKNOX1-201ENST00000291547 ADAM22Q9P0K1 906 aa11.42□□□□□ -0.58
PKNOX1-201ENST00000291547 PIK3C2AO00443 1686 aa11.42□□□□□ -0.58
PKNOX1-201ENST00000291547 GOLGA8IPA6NC78 632 aa11.42□□□□□ -0.58
PKNOX1-201ENST00000291547 GOLGA8JA6NMD2 632 aa11.42□□□□□ -0.58
PKNOX1-201ENST00000291547 USP27XA6NNY8 438 aa11.42□□□□□ -0.58
PKNOX1-201ENST00000291547 WBP4O75554 376 aaKnown RBP11.42□□□□□ -0.58
PKNOX1-201ENST00000291547 KRT8P05787 483 aa11.42□□□□□ -0.58
PKNOX1-201ENST00000291547 CARSP49589 748 aaKnown RBP11.42□□□□□ -0.58
PKNOX1-201ENST00000291547 ERFP50548 548 aa11.42□□□□□ -0.58
PKNOX1-201ENST00000291547 CAV1Q03135 178 aa11.42□□□□□ -0.58
PKNOX1-201ENST00000291547 KCNA1Q09470 495 aa11.42□□□□□ -0.58
PKNOX1-201ENST00000291547 SIRT2Q8IXJ6 389 aa11.42□□□□□ -0.58
PKNOX1-201ENST00000291547 TAGAPQ8N103 731 aa11.42□□□□□ -0.58
PKNOX1-201ENST00000291547 RBM41Q96IZ5 413 aaKnown RBP11.42□□□□□ -0.58
PKNOX1-201ENST00000291547 H0Y626 953 aa11.42□□□□□ -0.58
PKNOX1-201ENST00000291547 H7C1W4 665 aa11.42□□□□□ -0.58
PKNOX1-201ENST00000291547 DEAF1O75398 565 aaPredicted RBP11.42□□□□□ -0.58
PKNOX1-201ENST00000291547 TRIM16O95361 564 aa11.42□□□□□ -0.58
PKNOX1-201ENST00000291547 ADORA1P30542 326 aa11.42□□□□□ -0.58
PKNOX1-201ENST00000291547 NSUN2Q08J23 767 aaKnown RBP eCLIP11.42□□□□□ -0.58
PKNOX1-201ENST00000291547 TFDP2Q14188 446 aa11.42□□□□□ -0.58
PKNOX1-201ENST00000291547 CLEC4GQ6UXB4 293 aa11.42□□□□□ -0.58
PKNOX1-201ENST00000291547 ARMCX6Q7L4S7 300 aa11.42□□□□□ -0.58
PKNOX1-201ENST00000291547 PIGSQ96S52 555 aa11.42□□□□□ -0.58
PKNOX1-201ENST00000291547 TEX12Q9BXU0 123 aa11.42□□□□□ -0.58
PKNOX1-201ENST00000291547 ASPSCR1Q9BZE9 553 aa11.42□□□□□ -0.58
PKNOX1-201ENST00000291547 KIF17Q9P2E2 1029 aa11.42□□□□□ -0.58
PKNOX1-201ENST00000291547 PXDNQ92626 1479 aa11.41□□□□□ -0.58
PKNOX1-201ENST00000291547 SEMA3EO15041 775 aa11.41□□□□□ -0.58
PKNOX1-201ENST00000291547 EIF3HO15372 352 aaKnown RBP eCLIP11.41□□□□□ -0.58
PKNOX1-201ENST00000291547 AP1B1Q10567 949 aa11.41□□□□□ -0.58
PKNOX1-201ENST00000291547 ZBTB33Q86T24 672 aa11.41□□□□□ -0.58
PKNOX1-201ENST00000291547 CCDC17Q96LX7 622 aa11.41□□□□□ -0.58
PKNOX1-201ENST00000291547 AIFM3Q96NN9 605 aa11.41□□□□□ -0.58
PKNOX1-201ENST00000291547 OSBPL3Q9H4L5 887 aa11.41□□□□□ -0.58
PKNOX1-201ENST00000291547 KLHL8Q9P2G9 620 aaPredicted RBP11.41□□□□□ -0.58
PKNOX1-201ENST00000291547 DNAJC12Q9UKB3 198 aa11.41□□□□□ -0.58
PKNOX1-201ENST00000291547 NWD1Q149M9 1564 aa11.41□□□□□ -0.58
PKNOX1-201ENST00000291547 SYNDIG1LA6NDD5 238 aa11.41□□□□□ -0.58
PKNOX1-201ENST00000291547 STXBP3O00186 592 aa11.41□□□□□ -0.58
PKNOX1-201ENST00000291547 ZSCAN9O15535 394 aaPredicted RBP11.41□□□□□ -0.58
PKNOX1-201ENST00000291547 CAND2O75155 1236 aa11.41□□□□□ -0.58
PKNOX1-201ENST00000291547 LARGE1O95461 756 aa11.41□□□□□ -0.58
PKNOX1-201ENST00000291547 PAMP19021 973 aa11.41□□□□□ -0.58
PKNOX1-201ENST00000291547 PPARGP37231 505 aaPredicted RBP11.41□□□□□ -0.58
PKNOX1-201ENST00000291547 GFM2Q969S9 779 aaKnown RBP11.41□□□□□ -0.58
PKNOX1-201ENST00000291547 KCND1Q9NSA2 647 aa11.41□□□□□ -0.58
PKNOX1-201ENST00000291547 TLR7Q9NYK1 1049 aaKnown RBP11.41□□□□□ -0.58
PKNOX1-201ENST00000291547 COL15A1P39059 1388 aa11.41□□□□□ -0.58
PKNOX1-201ENST00000291547 BNIP3LO60238 219 aa11.41□□□□□ -0.58
PKNOX1-201ENST00000291547 SNX2O60749 519 aa11.41□□□□□ -0.58
PKNOX1-201ENST00000291547 PDE8BO95263 885 aa11.41□□□□□ -0.58
PKNOX1-201ENST00000291547 PAX7P23759 505 aa11.41□□□□□ -0.58
PKNOX1-201ENST00000291547 POU5F1BQ06416 359 aa11.41□□□□□ -0.58
PKNOX1-201ENST00000291547 KRT39Q6A163 491 aa11.41□□□□□ -0.58
PKNOX1-201ENST00000291547 NFRKBQ6P4R8 1299 aa11.41□□□□□ -0.58
PKNOX1-201ENST00000291547 PPP4R3CPQ6ZMV5 832 aa11.41□□□□□ -0.58
PKNOX1-201ENST00000291547 KCTD1Q719H9 257 aa11.41□□□□□ -0.58
PKNOX1-201ENST00000291547 ABI1Q8IZP0 508 aa11.41□□□□□ -0.58
PKNOX1-201ENST00000291547 TTC13Q8NBP0 860 aa11.41□□□□□ -0.58
PKNOX1-201ENST00000291547 RNF139Q8WU17 664 aa11.41□□□□□ -0.58
PKNOX1-201ENST00000291547 COA7Q96BR5 231 aa11.41□□□□□ -0.58
PKNOX1-201ENST00000291547 NEUROG2Q9H2A3 272 aa11.41□□□□□ -0.58
PKNOX1-201ENST00000291547 SRP68Q9UHB9 627 aaKnown RBP11.41□□□□□ -0.58
PKNOX1-201ENST00000291547 RGPD8O14715 1765 aaPredicted RBP11.41□□□□□ -0.58
PKNOX1-201ENST00000291547 KLHL33A6NCF5 533 aa11.41□□□□□ -0.58
PKNOX1-201ENST00000291547 C21orf2O43822 256 aa11.41□□□□□ -0.58
PKNOX1-201ENST00000291547 SEC24DO94855 1032 aaPredicted RBP11.41□□□□□ -0.58
PKNOX1-201ENST00000291547 SLC16A2P36021 539 aa11.41□□□□□ -0.58
PKNOX1-201ENST00000291547 DDR1Q08345 913 aa11.41□□□□□ -0.58
PKNOX1-201ENST00000291547 CCDC144BQ3MJ40 725 aa11.41□□□□□ -0.58
PKNOX1-201ENST00000291547 ARL13BQ3SXY8 428 aa11.41□□□□□ -0.58
PKNOX1-201ENST00000291547 CDV3Q9UKY7 258 aaKnown RBP11.41□□□□□ -0.58
PKNOX1-201ENST00000291547 VIRMAQ69YN4 1812 aaKnown RBP11.4□□□□□ -0.58
PKNOX1-201ENST00000291547 LGALS16A8MUM7 142 aa11.4□□□□□ -0.58
PKNOX1-201ENST00000291547 CCDC22O60826 627 aa11.4□□□□□ -0.58
PKNOX1-201ENST00000291547 ALDH1B1P30837 517 aa11.4□□□□□ -0.58
PKNOX1-201ENST00000291547 HOXA7P31268 230 aaPredicted RBP11.4□□□□□ -0.58
PKNOX1-201ENST00000291547 PGM1P36871 562 aa11.4□□□□□ -0.58
PKNOX1-201ENST00000291547 HADHAP40939 763 aa11.4□□□□□ -0.58
PKNOX1-201ENST00000291547 SERPINB10P48595 397 aa11.4□□□□□ -0.58
PKNOX1-201ENST00000291547 CCZ1BP86790 482 aa11.4□□□□□ -0.58
PKNOX1-201ENST00000291547 CCZ1P86791 482 aaPredicted RBP11.4□□□□□ -0.58
PKNOX1-201ENST00000291547 GUCY1A3Q02108 690 aa11.4□□□□□ -0.58
PKNOX1-201ENST00000291547 UBE3AQ05086 875 aa11.4□□□□□ -0.58
PKNOX1-201ENST00000291547 CHRNDQ07001 517 aa11.4□□□□□ -0.58
PKNOX1-201ENST00000291547 ZNF211Q13398 564 aaPredicted RBP11.4□□□□□ -0.58
PKNOX1-201ENST00000291547 DCAF15Q66K64 600 aa11.4□□□□□ -0.58
PKNOX1-201ENST00000291547 FRA10AC1Q70Z53 315 aa11.4□□□□□ -0.58
PKNOX1-201ENST00000291547 ULK4Q96C45 1275 aa11.4□□□□□ -0.58
PKNOX1-201ENST00000291547 TAF1DQ9H5J8 278 aaPredicted RBP11.4□□□□□ -0.58
PKNOX1-201ENST00000291547 HACD3Q9P035 362 aa11.4□□□□□ -0.58
PKNOX1-201ENST00000291547 USP14P54578 494 aa11.4□□□□□ -0.58
PKNOX1-201ENST00000291547 CDC37Q16543 378 aaPredicted RBP11.4□□□□□ -0.58
PKNOX1-201ENST00000291547 TJAP1Q5JTD0 557 aa11.4□□□□□ -0.58
PKNOX1-201ENST00000291547 ARMCX2Q7L311 632 aa11.4□□□□□ -0.58
PKNOX1-201ENST00000291547 DTX3LQ8TDB6 740 aa11.4□□□□□ -0.58
PKNOX1-201ENST00000291547 COG1Q8WTW3 980 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms