RNA–Protein interactions for RNA: ENST00000289448.2

HMHB1-201, Transcript of histocompatibility minor HB-1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HMHB1, Length 384 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMHB1-201ENST00000289448 ALDH7A1P49419 539 aaKnown RBP10.62□□□□□ -0.71
HMHB1-201ENST00000289448 RAB27AP51159 221 aa10.62□□□□□ -0.71
HMHB1-201ENST00000289448 NBR1Q14596 966 aa10.62□□□□□ -0.71
HMHB1-201ENST00000289448 LLGL2Q6P1M3 1020 aa10.62□□□□□ -0.71
HMHB1-201ENST00000289448 TMEM184AQ6ZMB5 413 aa10.62□□□□□ -0.71
HMHB1-201ENST00000289448 CATSPER3Q86XQ3 398 aa10.62□□□□□ -0.71
HMHB1-201ENST00000289448 RNF135Q8IUD6 432 aa10.62□□□□□ -0.71
HMHB1-201ENST00000289448 C4orf32Q8N8J7 132 aa10.62□□□□□ -0.71
HMHB1-201ENST00000289448 SMG8Q8ND04 991 aaKnown RBP10.62□□□□□ -0.71
HMHB1-201ENST00000289448 FBXO18Q8NFZ0 1043 aa10.62□□□□□ -0.71
HMHB1-201ENST00000289448 AUTS2Q8WXX7 1259 aa10.62□□□□□ -0.71
HMHB1-201ENST00000289448 SUSD6Q92537 303 aa10.62□□□□□ -0.71
HMHB1-201ENST00000289448 CPB2Q96IY4 423 aa10.62□□□□□ -0.71
HMHB1-201ENST00000289448 APOL5Q9BWW9 433 aa10.62□□□□□ -0.71
HMHB1-201ENST00000289448 EIF2AQ9BY44 585 aaKnown RBP10.62□□□□□ -0.71
HMHB1-201ENST00000289448 GBP3Q9H0R5 595 aa10.62□□□□□ -0.71
HMHB1-201ENST00000289448 FOXP1Q9H334 677 aaPredicted RBP10.62□□□□□ -0.71
HMHB1-201ENST00000289448 NGRNQ9NPE2 291 aaKnown RBP10.62□□□□□ -0.71
HMHB1-201ENST00000289448 GPRC5CQ9NQ84 441 aa10.62□□□□□ -0.71
HMHB1-201ENST00000289448 TECTAO75443 2155 aa10.62□□□□□ -0.71
HMHB1-201ENST00000289448 LOC730098B7Z3J9 87 aa10.61□□□□□ -0.71
HMHB1-201ENST00000289448 INO80B-WBP1J3KQ70 363 aa10.61□□□□□ -0.71
HMHB1-201ENST00000289448 B4GALT5O43286 388 aa10.61□□□□□ -0.71
HMHB1-201ENST00000289448 DCXO43602 365 aa10.61□□□□□ -0.71
HMHB1-201ENST00000289448 USO1O60763 962 aaKnown RBP10.61□□□□□ -0.71
HMHB1-201ENST00000289448 CLASP2O75122 1294 aaKnown RBP10.61□□□□□ -0.71
HMHB1-201ENST00000289448 DGAT1O75907 488 aa10.61□□□□□ -0.71
HMHB1-201ENST00000289448 ALADP13716 330 aa10.61□□□□□ -0.71
HMHB1-201ENST00000289448 NCLP19338 710 aaKnown RBP10.61□□□□□ -0.71
HMHB1-201ENST00000289448 TECP42680 631 aa10.61□□□□□ -0.71
HMHB1-201ENST00000289448 MBTD1Q05BQ5 628 aa10.61□□□□□ -0.71
HMHB1-201ENST00000289448 MXD4Q14582 209 aaPredicted RBP10.61□□□□□ -0.71
HMHB1-201ENST00000289448 SAFBQ15424 915 aaKnown RBP eCLIP10.61□□□□□ -0.71
HMHB1-201ENST00000289448 ANKRD54Q6NXT1 300 aa10.61□□□□□ -0.71
HMHB1-201ENST00000289448 IFNLR1Q8IU57 520 aaPredicted RBP10.61□□□□□ -0.71
HMHB1-201ENST00000289448 VPS52Q8N1B4 723 aa10.61□□□□□ -0.71
HMHB1-201ENST00000289448 FEZF2Q8TBJ5 459 aa10.61□□□□□ -0.71
HMHB1-201ENST00000289448 PGBD4Q96DM1 585 aa10.61□□□□□ -0.71
HMHB1-201ENST00000289448 IGSF21Q96ID5 467 aa10.61□□□□□ -0.71
HMHB1-201ENST00000289448 ZSCAN31Q96LW9 406 aaPredicted RBP10.61□□□□□ -0.71
HMHB1-201ENST00000289448 ZBP1Q9H171 429 aa10.61□□□□□ -0.71
HMHB1-201ENST00000289448 POLR3FQ9H1D9 316 aaPredicted RBP10.61□□□□□ -0.71
HMHB1-201ENST00000289448 MUTYHQ9UIF7 546 aa10.61□□□□□ -0.71
HMHB1-201ENST00000289448 CDH22Q9UJ99 828 aa10.61□□□□□ -0.71
HMHB1-201ENST00000289448 HES2Q9Y543 173 aa10.61□□□□□ -0.71
HMHB1-201ENST00000289448 ERLIN2O94905 339 aa10.6□□□□□ -0.71
HMHB1-201ENST00000289448 CXCL14O95715 111 aa10.6□□□□□ -0.71
HMHB1-201ENST00000289448 POMCP01189 267 aa10.6□□□□□ -0.71
HMHB1-201ENST00000289448 OR52Z1P0C646 297 aa10.6□□□□□ -0.71
HMHB1-201ENST00000289448 XRCC6P12956 609 aaKnown RBP eCLIP10.6□□□□□ -0.71
HMHB1-201ENST00000289448 ARF4P18085 180 aaPredicted RBP10.6□□□□□ -0.71
HMHB1-201ENST00000289448 RBM25P49756 843 aaKnown RBP10.6□□□□□ -0.71
HMHB1-201ENST00000289448 TOB1P50616 345 aaPredicted RBP10.6□□□□□ -0.71
HMHB1-201ENST00000289448 RNASELQ05823 741 aaKnown RBP10.6□□□□□ -0.71
HMHB1-201ENST00000289448 POU5F1BQ06416 359 aa10.6□□□□□ -0.71
HMHB1-201ENST00000289448 SMC1AQ14683 1233 aaKnown RBP10.6□□□□□ -0.71
HMHB1-201ENST00000289448 CBX2Q14781 532 aaPredicted RBP10.6□□□□□ -0.71
HMHB1-201ENST00000289448 ECM1Q16610 540 aa10.6□□□□□ -0.71
HMHB1-201ENST00000289448 HERC4Q5GLZ8 1057 aaPredicted RBP10.6□□□□□ -0.71
HMHB1-201ENST00000289448 TTC38Q5R3I4 469 aa10.6□□□□□ -0.71
HMHB1-201ENST00000289448 POTEGQ6S5H5 508 aa10.6□□□□□ -0.71
HMHB1-201ENST00000289448 MAEAQ7L5Y9 396 aa10.6□□□□□ -0.71
HMHB1-201ENST00000289448 DDX53Q86TM3 631 aaKnown RBP10.6□□□□□ -0.71
HMHB1-201ENST00000289448 CDR2LQ86X02 465 aaPredicted RBP10.6□□□□□ -0.71
HMHB1-201ENST00000289448 NOSTRINQ8IVI9 506 aa10.6□□□□□ -0.71
HMHB1-201ENST00000289448 RSPH1Q8WYR4 309 aa10.6□□□□□ -0.71
HMHB1-201ENST00000289448 TMEM169Q96HH4 297 aa10.6□□□□□ -0.71
HMHB1-201ENST00000289448 POP1Q99575 1024 aaKnown RBP10.6□□□□□ -0.71
HMHB1-201ENST00000289448 POLR3CQ9BUI4 534 aaPredicted RBP10.6□□□□□ -0.71
HMHB1-201ENST00000289448 PHF7Q9BWX1 381 aaPredicted RBP10.6□□□□□ -0.71
HMHB1-201ENST00000289448 CSRNP2Q9H175 543 aa10.6□□□□□ -0.71
HMHB1-201ENST00000289448 RSAD1Q9HA92 442 aa10.6□□□□□ -0.71
HMHB1-201ENST00000289448 TUFT1Q9NNX1 390 aa10.6□□□□□ -0.71
HMHB1-201ENST00000289448 SH2B1Q9NRF2 756 aaPredicted RBP10.6□□□□□ -0.71
HMHB1-201ENST00000289448 MIOSQ9NXC5 875 aa10.6□□□□□ -0.71
HMHB1-201ENST00000289448 IPPQ9Y573 584 aa10.6□□□□□ -0.71
HMHB1-201ENST00000289448 HCFC2Q9Y5Z7 792 aa10.6□□□□□ -0.71
HMHB1-201ENST00000289448 ARID2Q68CP9 1835 aa10.6□□□□□ -0.71
HMHB1-201ENST00000289448 ARL5CA6NH57 179 aa10.59□□□□□ -0.71
HMHB1-201ENST00000289448 TTLL13PA6NNM8 815 aa10.59□□□□□ -0.71
HMHB1-201ENST00000289448 PRR33A8MZF0 331 aa10.59□□□□□ -0.71
HMHB1-201ENST00000289448 F8W810 466 aa10.59□□□□□ -0.71
HMHB1-201ENST00000289448 INPPL1O15357 1258 aa10.59□□□□□ -0.71
HMHB1-201ENST00000289448 CTSAP10619 480 aa10.59□□□□□ -0.71
HMHB1-201ENST00000289448 ITGA4P13612 1032 aa10.59□□□□□ -0.71
HMHB1-201ENST00000289448 U2AF2P26368 475 aaKnown RBP eCLIP10.59□□□□□ -0.71
HMHB1-201ENST00000289448 RPA1P27694 616 aa10.59□□□□□ -0.71
HMHB1-201ENST00000289448 AXLP30530 894 aa10.59□□□□□ -0.71
HMHB1-201ENST00000289448 HMGN5P82970 282 aaKnown RBP10.59□□□□□ -0.71
HMHB1-201ENST00000289448 TFDP1Q14186 410 aa10.59□□□□□ -0.71
HMHB1-201ENST00000289448 KANK3Q6NY19 840 aa10.59□□□□□ -0.71
HMHB1-201ENST00000289448 FAM184AQ8NB25 1140 aa10.59□□□□□ -0.71
HMHB1-201ENST00000289448 BSNDQ8WZ55 320 aa10.59□□□□□ -0.71
HMHB1-201ENST00000289448 RPGRIP1Q96KN7 1286 aa10.59□□□□□ -0.71
HMHB1-201ENST00000289448 ZFP42Q96MM3 310 aa10.59□□□□□ -0.71
HMHB1-201ENST00000289448 NACC1Q96RE7 527 aa10.59□□□□□ -0.71
HMHB1-201ENST00000289448 GAD1Q99259 594 aa10.59□□□□□ -0.71
HMHB1-201ENST00000289448 NFKBIZQ9BYH8 718 aa10.59□□□□□ -0.71
HMHB1-201ENST00000289448 NXF3Q9H4D5 531 aaKnown RBP10.59□□□□□ -0.71
HMHB1-201ENST00000289448 POLD4Q9HCU8 107 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms