RNA–Protein interactions for RNA: ENST00000281834.3

TNFSF4-201, Transcript of TNF superfamily member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFSF4, Length 3,470 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4-201ENST00000281834 LY6KQ17RY6 165 aa6.55□□□□□ -1.36
TNFSF4-201ENST00000281834 ZFYVE27Q5T4F4 411 aa6.55□□□□□ -1.36
TNFSF4-201ENST00000281834 SPOPLQ6IQ16 392 aa6.55□□□□□ -1.36
TNFSF4-201ENST00000281834 AADACL2Q6P093 401 aa6.55□□□□□ -1.36
TNFSF4-201ENST00000281834 B3GNT9Q6UX72 402 aa6.55□□□□□ -1.36
TNFSF4-201ENST00000281834 INTS8Q75QN2 995 aaKnown RBP6.55□□□□□ -1.36
TNFSF4-201ENST00000281834 DDX42Q86XP3 938 aaKnown RBP eCLIP6.55□□□□□ -1.36
TNFSF4-201ENST00000281834 LRRC71Q8N4P6 559 aa6.55□□□□□ -1.36
TNFSF4-201ENST00000281834 GOLGA6L1Q8N7Z2 621 aa6.55□□□□□ -1.36
TNFSF4-201ENST00000281834 ARHGEF26Q96DR7 871 aa6.55□□□□□ -1.36
TNFSF4-201ENST00000281834 IFT74Q96LB3 600 aa6.55□□□□□ -1.36
TNFSF4-201ENST00000281834 SELENOOQ9BVL4 669 aa6.55□□□□□ -1.36
TNFSF4-201ENST00000281834 IGSF9BQ9UPX0 1349 aa6.55□□□□□ -1.36
TNFSF4-201ENST00000281834 CLEC11AQ9Y240 323 aa6.55□□□□□ -1.36
TNFSF4-201ENST00000281834 GINS2Q9Y248 185 aa6.55□□□□□ -1.36
TNFSF4-201ENST00000281834 RPTORQ8N122 1335 aa6.55□□□□□ -1.36
TNFSF4-201ENST00000281834 BUB1BO60566 1050 aaPredicted RBP6.55□□□□□ -1.36
TNFSF4-201ENST00000281834 SGPL1O95470 568 aa6.55□□□□□ -1.36
TNFSF4-201ENST00000281834 FTLP02792 175 aaPredicted RBP6.55□□□□□ -1.36
TNFSF4-201ENST00000281834 PSAPP07602 524 aa6.55□□□□□ -1.36
TNFSF4-201ENST00000281834 LMNB1P20700 586 aa6.55□□□□□ -1.36
TNFSF4-201ENST00000281834 SSR1P43307 286 aaKnown RBP6.55□□□□□ -1.36
TNFSF4-201ENST00000281834 CARSP49589 748 aaKnown RBP6.55□□□□□ -1.36
TNFSF4-201ENST00000281834 MAP3K10Q02779 954 aa6.55□□□□□ -1.36
TNFSF4-201ENST00000281834 STXBP2Q15833 593 aa6.55□□□□□ -1.36
TNFSF4-201ENST00000281834 GJC2Q5T442 439 aaPredicted RBP6.55□□□□□ -1.36
TNFSF4-201ENST00000281834 CATSPERGQ6ZRH7 1159 aa6.55□□□□□ -1.36
TNFSF4-201ENST00000281834 SLC47A2Q86VL8 602 aa6.55□□□□□ -1.36
TNFSF4-201ENST00000281834 PASD1Q8IV76 773 aa6.55□□□□□ -1.36
TNFSF4-201ENST00000281834 C4orf19Q8IY42 314 aa6.55□□□□□ -1.36
TNFSF4-201ENST00000281834 RPUSD2Q8IZ73 545 aaKnown RBP6.55□□□□□ -1.36
TNFSF4-201ENST00000281834 GOLGA5Q8TBA6 731 aa6.55□□□□□ -1.36
TNFSF4-201ENST00000281834 SLC35G2Q8TBE7 412 aa6.55□□□□□ -1.36
TNFSF4-201ENST00000281834 NEK9Q8TD19 979 aa6.55□□□□□ -1.36
TNFSF4-201ENST00000281834 FNBP1Q96RU3 617 aa6.55□□□□□ -1.36
TNFSF4-201ENST00000281834 RUFY1Q96T51 708 aa6.55□□□□□ -1.36
TNFSF4-201ENST00000281834 STK33Q9BYT3 514 aa6.55□□□□□ -1.36
TNFSF4-201ENST00000281834 TMEM117Q9H0C3 514 aa6.55□□□□□ -1.36
TNFSF4-201ENST00000281834 VPS33BQ9H267 617 aa6.55□□□□□ -1.36
TNFSF4-201ENST00000281834 DPH5Q9H2P9 285 aa6.55□□□□□ -1.36
TNFSF4-201ENST00000281834 BTBD7Q9P203 1132 aa6.55□□□□□ -1.36
TNFSF4-201ENST00000281834 TNS1Q9HBL0 1735 aaKnown RBP6.54□□□□□ -1.36
TNFSF4-201ENST00000281834 USP2O75604 605 aaPredicted RBP6.54□□□□□ -1.36
TNFSF4-201ENST00000281834 GJB1P08034 283 aa6.54□□□□□ -1.36
TNFSF4-201ENST00000281834 GLI1P08151 1106 aa6.54□□□□□ -1.36
TNFSF4-201ENST00000281834 ITGA4P13612 1032 aa6.54□□□□□ -1.36
TNFSF4-201ENST00000281834 SFNP31947 248 aa6.54□□□□□ -1.36
TNFSF4-201ENST00000281834 DRP2Q13474 957 aa6.54□□□□□ -1.36
TNFSF4-201ENST00000281834 MAP9Q49MG5 647 aa6.54□□□□□ -1.36
TNFSF4-201ENST00000281834 ZNF394Q53GI3 561 aa6.54□□□□□ -1.36
TNFSF4-201ENST00000281834 KCTD16Q68DU8 428 aa6.54□□□□□ -1.36
TNFSF4-201ENST00000281834 CPNE8Q86YQ8 564 aa6.54□□□□□ -1.36
TNFSF4-201ENST00000281834 METTL13Q8N6R0 699 aa6.54□□□□□ -1.36
TNFSF4-201ENST00000281834 TMEM161BQ8NDZ6 487 aa6.54□□□□□ -1.36
TNFSF4-201ENST00000281834 DEPTORQ8TB45 409 aa6.54□□□□□ -1.36
TNFSF4-201ENST00000281834 TRAPPC12Q8WVT3 735 aa6.54□□□□□ -1.36
TNFSF4-201ENST00000281834 SYN2Q92777 582 aaPredicted RBP6.54□□□□□ -1.36
TNFSF4-201ENST00000281834 SEMA4DQ92854 862 aa6.54□□□□□ -1.36
TNFSF4-201ENST00000281834 TATDN2Q93075 761 aa6.54□□□□□ -1.36
TNFSF4-201ENST00000281834 BORCS6Q96GS4 357 aa6.54□□□□□ -1.36
TNFSF4-201ENST00000281834 TARS2Q9BW92 718 aaKnown RBP6.54□□□□□ -1.36
TNFSF4-201ENST00000281834 CD2APQ9Y5K6 639 aa6.54□□□□□ -1.36
TNFSF4-201ENST00000281834 MYH11P35749 1972 aa6.54□□□□□ -1.36
TNFSF4-201ENST00000281834 KRIT1O00522 736 aa6.54□□□□□ -1.36
TNFSF4-201ENST00000281834 NOP56O00567 594 aaKnown RBP6.54□□□□□ -1.36
TNFSF4-201ENST00000281834 GGPS1O95749 300 aa6.54□□□□□ -1.36
TNFSF4-201ENST00000281834 KCNA2P16389 499 aa6.54□□□□□ -1.36
TNFSF4-201ENST00000281834 GGCXP38435 758 aa6.54□□□□□ -1.36
TNFSF4-201ENST00000281834 CDR1P51861 262 aa6.54□□□□□ -1.36
TNFSF4-201ENST00000281834 DMTNQ08495 405 aa6.54□□□□□ -1.36
TNFSF4-201ENST00000281834 TMEM63BQ5T3F8 832 aa6.54□□□□□ -1.36
TNFSF4-201ENST00000281834 LLGL2Q6P1M3 1020 aa6.54□□□□□ -1.36
TNFSF4-201ENST00000281834 RNF10Q8N5U6 811 aaKnown RBP6.54□□□□□ -1.36
TNFSF4-201ENST00000281834 SLC7A3Q8WY07 619 aa6.54□□□□□ -1.36
TNFSF4-201ENST00000281834 INPP4AQ96PE3 977 aaPredicted RBP6.54□□□□□ -1.36
TNFSF4-201ENST00000281834 CELF4Q9BZC1 486 aaKnown RBP6.54□□□□□ -1.36
TNFSF4-201ENST00000281834 ZNF302Q9NR11 478 aa6.54□□□□□ -1.36
TNFSF4-201ENST00000281834 CYP26B1Q9NR63 512 aa6.54□□□□□ -1.36
TNFSF4-201ENST00000281834 KCND2Q9NZV8 630 aa6.54□□□□□ -1.36
TNFSF4-201ENST00000281834 STIM2Q9P246 746 aa6.54□□□□□ -1.36
TNFSF4-201ENST00000281834 AMACRQ9UHK6 382 aa6.54□□□□□ -1.36
TNFSF4-201ENST00000281834 RAB21Q9UL25 225 aa6.54□□□□□ -1.36
TNFSF4-201ENST00000281834 BZW2Q9Y6E2 419 aaKnown RBP6.54□□□□□ -1.36
TNFSF4-201ENST00000281834 COL2A1P02458 1487 aaPredicted RBP6.54□□□□□ -1.36
TNFSF4-201ENST00000281834 C19orf81C9J6K1 198 aa6.53□□□□□ -1.36
TNFSF4-201ENST00000281834 PJA2O43164 708 aa6.53□□□□□ -1.36
TNFSF4-201ENST00000281834 SLC26A4O43511 780 aa6.53□□□□□ -1.36
TNFSF4-201ENST00000281834 KIF4AO95239 1232 aa6.53□□□□□ -1.36
TNFSF4-201ENST00000281834 LCA5LO95447 670 aa6.53□□□□□ -1.36
TNFSF4-201ENST00000281834 FGGP02679 453 aa6.53□□□□□ -1.36
TNFSF4-201ENST00000281834 STRN3Q13033 797 aa6.53□□□□□ -1.36
TNFSF4-201ENST00000281834 EMC2Q15006 297 aa6.53□□□□□ -1.36
TNFSF4-201ENST00000281834 ZBTB41Q5SVQ8 909 aa6.53□□□□□ -1.36
TNFSF4-201ENST00000281834 DAB2IPQ5VWQ8 1189 aa6.53□□□□□ -1.36
TNFSF4-201ENST00000281834 MIS18BP1Q6P0N0 1132 aa6.53□□□□□ -1.36
TNFSF4-201ENST00000281834 ZC3H3Q8IXZ2 948 aaKnown RBP6.53□□□□□ -1.36
TNFSF4-201ENST00000281834 TPCN2Q8NHX9 752 aa6.53□□□□□ -1.36
TNFSF4-201ENST00000281834 COPS5Q92905 334 aa6.53□□□□□ -1.36
TNFSF4-201ENST00000281834 ATP6V0A4Q9HBG4 840 aa6.53□□□□□ -1.36
TNFSF4-201ENST00000281834 XPNPEP1Q9NQW7 623 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms