RNA–Protein interactions for RNA: ENST00000277575.5

USP6NL-201, Transcript of USP6 N-terminal like, humanhuman

APPRIS P3 TSL 5 BASIC

Gene USP6NL, Length 4,512 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-201ENST00000277575 VCXQ9H320 206 aa12.04□□□□□ -0.48
USP6NL-201ENST00000277575 CAPN7Q9Y6W3 813 aa12.04□□□□□ -0.48
USP6NL-201ENST00000277575 POLR1AO95602 1720 aaPredicted RBP12.04□□□□□ -0.48
USP6NL-201ENST00000277575 A0A1B0GTH6 734 aa12.04□□□□□ -0.48
USP6NL-201ENST00000277575 ACOT2P49753 483 aa12.04□□□□□ -0.48
USP6NL-201ENST00000277575 MXD4Q14582 209 aaPredicted RBP12.04□□□□□ -0.48
USP6NL-201ENST00000277575 KCND2Q9NZV8 630 aa12.04□□□□□ -0.48
USP6NL-201ENST00000277575 MAD2L2Q9UI95 211 aa12.04□□□□□ -0.48
USP6NL-201ENST00000277575 POLIQ9UNA4 740 aa12.04□□□□□ -0.48
USP6NL-201ENST00000277575 BNIP3LO60238 219 aa12.04□□□□□ -0.48
USP6NL-201ENST00000277575 SLC25A27O95847 323 aa12.04□□□□□ -0.48
USP6NL-201ENST00000277575 MAP7Q14244 749 aa12.04□□□□□ -0.48
USP6NL-201ENST00000277575 MTF1Q14872 753 aa12.04□□□□□ -0.48
USP6NL-201ENST00000277575 NFRKBQ6P4R8 1299 aa12.04□□□□□ -0.48
USP6NL-201ENST00000277575 TRIM42Q8IWZ5 723 aa12.04□□□□□ -0.48
USP6NL-201ENST00000277575 GINM1Q9NU53 330 aa12.04□□□□□ -0.48
USP6NL-201ENST00000277575 REREQ9P2R6 1566 aa12.04□□□□□ -0.48
USP6NL-201ENST00000277575 C6orf222P0C671 652 aaPredicted RBP12.03□□□□□ -0.48
USP6NL-201ENST00000277575 CA4P22748 312 aa12.03□□□□□ -0.48
USP6NL-201ENST00000277575 GRIN1Q05586 938 aa12.03□□□□□ -0.48
USP6NL-201ENST00000277575 RBBP5Q15291 538 aaKnown RBP12.03□□□□□ -0.48
USP6NL-201ENST00000277575 ZNF710Q8N1W2 664 aa12.03□□□□□ -0.48
USP6NL-201ENST00000277575 CCDC197Q8NCU1 140 aa12.03□□□□□ -0.48
USP6NL-201ENST00000277575 RFFLQ8WZ73 363 aa12.03□□□□□ -0.48
USP6NL-201ENST00000277575 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.03□□□□□ -0.48
USP6NL-201ENST00000277575 ACAP3Q96P50 834 aa12.03□□□□□ -0.48
USP6NL-201ENST00000277575 GCNAQ96QF7 691 aa12.03□□□□□ -0.48
USP6NL-201ENST00000277575 OSBPL9Q96SU4 736 aa12.03□□□□□ -0.48
USP6NL-201ENST00000277575 TTC1Q99614 292 aa12.03□□□□□ -0.48
USP6NL-201ENST00000277575 KLC2Q9H0B6 622 aa12.03□□□□□ -0.48
USP6NL-201ENST00000277575 KCNH7Q9NS40 1196 aa12.03□□□□□ -0.48
USP6NL-201ENST00000277575 RIMS1Q86UR5 1692 aaKnown RBP12.03□□□□□ -0.48
USP6NL-201ENST00000277575 TXNDC9O14530 226 aa12.03□□□□□ -0.48
USP6NL-201ENST00000277575 CYP26A1O43174 497 aa12.03□□□□□ -0.48
USP6NL-201ENST00000277575 CAP2P40123 477 aa12.03□□□□□ -0.48
USP6NL-201ENST00000277575 ZNF157P51786 506 aaPredicted RBP12.03□□□□□ -0.48
USP6NL-201ENST00000277575 EDRF1Q3B7T1 1238 aa12.03□□□□□ -0.48
USP6NL-201ENST00000277575 PLA2G4FQ68DD2 849 aa12.03□□□□□ -0.48
USP6NL-201ENST00000277575 ATP6V1E2Q96A05 226 aa12.03□□□□□ -0.48
USP6NL-201ENST00000277575 FAF2Q96CS3 445 aa12.03□□□□□ -0.48
USP6NL-201ENST00000277575 CALR3Q96L12 384 aaKnown RBP12.03□□□□□ -0.48
USP6NL-201ENST00000277575 NUDCD1Q96RS6 583 aa12.03□□□□□ -0.48
USP6NL-201ENST00000277575 USP27XA6NNY8 438 aa12.03□□□□□ -0.48
USP6NL-201ENST00000277575 SLC16A3O15427 465 aaKnown RBP12.03□□□□□ -0.48
USP6NL-201ENST00000277575 NCK2O43639 380 aa12.03□□□□□ -0.48
USP6NL-201ENST00000277575 KRT7P08729 469 aa12.03□□□□□ -0.48
USP6NL-201ENST00000277575 PLS3P13797 630 aa12.03□□□□□ -0.48
USP6NL-201ENST00000277575 SCFD2Q8WU76 684 aa12.03□□□□□ -0.48
USP6NL-201ENST00000277575 KCNB2Q92953 911 aa12.03□□□□□ -0.48
USP6NL-201ENST00000277575 PARK7Q99497 189 aaKnown RBP12.03□□□□□ -0.48
USP6NL-201ENST00000277575 DDX47Q9H0S4 455 aaKnown RBP12.03□□□□□ -0.48
USP6NL-201ENST00000277575 KLHL8Q9P2G9 620 aaPredicted RBP12.03□□□□□ -0.48
USP6NL-201ENST00000277575 LCMT1Q9UIC8 334 aa12.03□□□□□ -0.48
USP6NL-201ENST00000277575 PIN4Q9Y237 131 aaKnown RBP12.03□□□□□ -0.48
USP6NL-201ENST00000277575 SLC26A4O43511 780 aa12.03□□□□□ -0.48
USP6NL-201ENST00000277575 KRT10P13645 584 aa12.03□□□□□ -0.48
USP6NL-201ENST00000277575 FXR2P51116 673 aaKnown RBP eCLIP12.03□□□□□ -0.48
USP6NL-201ENST00000277575 NPEPPSP55786 919 aa12.03□□□□□ -0.48
USP6NL-201ENST00000277575 PRKCEQ02156 737 aa12.03□□□□□ -0.48
USP6NL-201ENST00000277575 FAM102AQ5T9C2 384 aaPredicted RBP12.03□□□□□ -0.48
USP6NL-201ENST00000277575 MAP3K21Q5TCX8 1036 aa12.03□□□□□ -0.48
USP6NL-201ENST00000277575 ZNF560Q96MR9 790 aa12.03□□□□□ -0.48
USP6NL-201ENST00000277575 CHP1Q99653 195 aa12.03□□□□□ -0.48
USP6NL-201ENST00000277575 PFASO15067 1338 aa12.02□□□□□ -0.48
USP6NL-201ENST00000277575 CCL15-CCL14A0A0B4J2E2 113 aa12.02□□□□□ -0.48
USP6NL-201ENST00000277575 UBE2Q2LH0YL09 131 aa12.02□□□□□ -0.48
USP6NL-201ENST00000277575 CYP2B6P20813 491 aa12.02□□□□□ -0.48
USP6NL-201ENST00000277575 CCL15Q16663 113 aa12.02□□□□□ -0.48
USP6NL-201ENST00000277575 XRRA1Q6P2D8 792 aa12.02□□□□□ -0.48
USP6NL-201ENST00000277575 SCYL3Q8IZE3 742 aa12.02□□□□□ -0.48
USP6NL-201ENST00000277575 CHST13Q8NET6 341 aa12.02□□□□□ -0.48
USP6NL-201ENST00000277575 URGCPQ8TCY9 931 aa12.02□□□□□ -0.48
USP6NL-201ENST00000277575 RTFDC1Q9BY42 306 aaPredicted RBP12.02□□□□□ -0.48
USP6NL-201ENST00000277575 SAYSD1Q9NPB0 183 aa12.02□□□□□ -0.48
USP6NL-201ENST00000277575 ANGPTL3Q9Y5C1 460 aa12.02□□□□□ -0.48
USP6NL-201ENST00000277575 MAGEB2O15479 319 aa12.02□□□□□ -0.49
USP6NL-201ENST00000277575 SART1O43290 800 aaKnown RBP12.02□□□□□ -0.49
USP6NL-201ENST00000277575 GH1P01241 217 aa12.02□□□□□ -0.49
USP6NL-201ENST00000277575 MYBP10242 640 aa12.02□□□□□ -0.49
USP6NL-201ENST00000277575 CASP7P55210 303 aa12.02□□□□□ -0.49
USP6NL-201ENST00000277575 HUNKP57058 714 aa12.02□□□□□ -0.49
USP6NL-201ENST00000277575 IFT88Q13099 833 aa12.02□□□□□ -0.49
USP6NL-201ENST00000277575 KYAT1Q16773 422 aa12.02□□□□□ -0.49
USP6NL-201ENST00000277575 ZC2HC1CQ53FD0 456 aaPredicted RBP12.02□□□□□ -0.49
USP6NL-201ENST00000277575 RAB44Q7Z6P3 723 aaPredicted RBP12.02□□□□□ -0.49
USP6NL-201ENST00000277575 RHOT1Q8IXI2 618 aa12.02□□□□□ -0.49
USP6NL-201ENST00000277575 CFAP61Q8NHU2 1237 aa12.02□□□□□ -0.49
USP6NL-201ENST00000277575 ZKSCAN4Q969J2 545 aaPredicted RBP12.02□□□□□ -0.49
USP6NL-201ENST00000277575 CFAP36Q96G28 342 aa12.02□□□□□ -0.49
USP6NL-201ENST00000277575 MOV10L1Q9BXT6 1211 aaKnown RBP12.02□□□□□ -0.49
USP6NL-201ENST00000277575 IP6K2Q9UHH9 426 aa12.02□□□□□ -0.49
USP6NL-201ENST00000277575 PACSIN2Q9UNF0 486 aaPredicted RBP12.02□□□□□ -0.49
USP6NL-201ENST00000277575 A0A1B0GUA9 196 aa12.02□□□□□ -0.49
USP6NL-201ENST00000277575 NR1D1P20393 614 aa12.02□□□□□ -0.49
USP6NL-201ENST00000277575 ADORA2BP29275 332 aa12.02□□□□□ -0.49
USP6NL-201ENST00000277575 FMO5P49326 533 aa12.02□□□□□ -0.49
USP6NL-201ENST00000277575 ARL4CP56559 192 aa12.02□□□□□ -0.49
USP6NL-201ENST00000277575 SNRNP35Q16560 246 aaKnown RBP12.02□□□□□ -0.49
USP6NL-201ENST00000277575 C6orf118Q5T5N4 469 aa12.02□□□□□ -0.49
USP6NL-201ENST00000277575 AGPAT1Q99943 283 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms