RNA–Protein interactions for RNA: ENST00000273027.6

CPNE9-201, Transcript of copine family member 9, humanhuman

TSL 3

Gene CPNE9, Length 588 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE9-201ENST00000273027 DHX34Q14147 1143 aaKnown RBP10.93□□□□□ -0.66
CPNE9-201ENST00000273027 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.93□□□□□ -0.66
CPNE9-201ENST00000273027 INTS8Q75QN2 995 aaKnown RBP10.93□□□□□ -0.66
CPNE9-201ENST00000273027 ZNF720Q7Z2F6 126 aa10.93□□□□□ -0.66
CPNE9-201ENST00000273027 YTHDF3Q7Z739 585 aaKnown RBP10.93□□□□□ -0.66
CPNE9-201ENST00000273027 FAM178BQ8IXR5 827 aa10.93□□□□□ -0.66
CPNE9-201ENST00000273027 MYCT1Q8N699 235 aa10.93□□□□□ -0.66
CPNE9-201ENST00000273027 HES6Q96HZ4 224 aa10.93□□□□□ -0.66
CPNE9-201ENST00000273027 LRCH3Q96II8 777 aa10.93□□□□□ -0.66
CPNE9-201ENST00000273027 ATP6V1G3Q96LB4 118 aa10.93□□□□□ -0.66
CPNE9-201ENST00000273027 KRT12Q99456 494 aa10.93□□□□□ -0.66
CPNE9-201ENST00000273027 RANBP17Q9H2T7 1088 aaKnown RBP10.93□□□□□ -0.66
CPNE9-201ENST00000273027 PRO3102Q9H379 93 aa10.93□□□□□ -0.66
CPNE9-201ENST00000273027 RASAL2Q9UJF2 1139 aa10.93□□□□□ -0.66
CPNE9-201ENST00000273027 DBR1Q9UK59 544 aaKnown RBP10.93□□□□□ -0.66
CPNE9-201ENST00000273027 FEM1BQ9UK73 627 aa10.93□□□□□ -0.66
CPNE9-201ENST00000273027 PRR12Q9ULL5 1215 aa10.93□□□□□ -0.66
CPNE9-201ENST00000273027 UTP11Q9Y3A2 253 aaKnown RBP10.93□□□□□ -0.66
CPNE9-201ENST00000273027 COL6A3P12111 3177 aa10.93□□□□□ -0.66
CPNE9-201ENST00000273027 SOX1O00570 391 aaPredicted RBP10.92□□□□□ -0.66
CPNE9-201ENST00000273027 TGFB1I1O43294 461 aa10.92□□□□□ -0.66
CPNE9-201ENST00000273027 NCK2O43639 380 aa10.92□□□□□ -0.66
CPNE9-201ENST00000273027 CEP104O60308 925 aa10.92□□□□□ -0.66
CPNE9-201ENST00000273027 GAS7O60861 476 aa10.92□□□□□ -0.66
CPNE9-201ENST00000273027 ZMYND10O75800 440 aa10.92□□□□□ -0.66
CPNE9-201ENST00000273027 SLITRK3O94933 977 aa10.92□□□□□ -0.66
CPNE9-201ENST00000273027 FTCDO95954 541 aa10.92□□□□□ -0.66
CPNE9-201ENST00000273027 GNRH1P01148 92 aa10.92□□□□□ -0.66
CPNE9-201ENST00000273027 MYZAPP0CAP1 466 aa10.92□□□□□ -0.66
CPNE9-201ENST00000273027 HOXD13P35453 343 aa10.92□□□□□ -0.66
CPNE9-201ENST00000273027 USP8P40818 1118 aa10.92□□□□□ -0.66
CPNE9-201ENST00000273027 MNX1P50219 401 aaPredicted RBP10.92□□□□□ -0.66
CPNE9-201ENST00000273027 SLC7A5Q01650 507 aa10.92□□□□□ -0.66
CPNE9-201ENST00000273027 NFIAQ12857 509 aa10.92□□□□□ -0.66
CPNE9-201ENST00000273027 VGLL4Q14135 290 aa10.92□□□□□ -0.66
CPNE9-201ENST00000273027 CEP55Q53EZ4 464 aa10.92□□□□□ -0.66
CPNE9-201ENST00000273027 B3GNT9Q6UX72 402 aa10.92□□□□□ -0.66
CPNE9-201ENST00000273027 USP37Q86T82 979 aa10.92□□□□□ -0.66
CPNE9-201ENST00000273027 NT5DC3Q86UY8 548 aa10.92□□□□□ -0.66
CPNE9-201ENST00000273027 TAX1BP1Q86VP1 789 aa10.92□□□□□ -0.66
CPNE9-201ENST00000273027 MCF2L2Q86YR7 1114 aa10.92□□□□□ -0.66
CPNE9-201ENST00000273027 ANKRD13CQ8N6S4 541 aa10.92□□□□□ -0.66
CPNE9-201ENST00000273027 BCAS4Q8TDM0 211 aa10.92□□□□□ -0.66
CPNE9-201ENST00000273027 HDAC7Q8WUI4 952 aa10.92□□□□□ -0.66
CPNE9-201ENST00000273027 FAM151AQ8WW52 585 aa10.92□□□□□ -0.66
CPNE9-201ENST00000273027 P3H4Q92791 437 aa10.92□□□□□ -0.66
CPNE9-201ENST00000273027 CCDC43Q96MW1 224 aaKnown RBP10.92□□□□□ -0.66
CPNE9-201ENST00000273027 RPS6KC1Q96S38 1066 aa10.92□□□□□ -0.66
CPNE9-201ENST00000273027 STRA6Q9BX79 667 aa10.92□□□□□ -0.66
CPNE9-201ENST00000273027 PLVAPQ9BX97 442 aa10.92□□□□□ -0.66
CPNE9-201ENST00000273027 APEX2Q9UBZ4 518 aa10.92□□□□□ -0.66
CPNE9-201ENST00000273027 RSPH14Q9UHP6 348 aa10.92□□□□□ -0.66
CPNE9-201ENST00000273027 NFU1Q9UMS0 254 aa10.92□□□□□ -0.66
CPNE9-201ENST00000273027 CSADQ9Y600 493 aa10.92□□□□□ -0.66
CPNE9-201ENST00000273027 SYNGAP1Q96PV0 1343 aa10.91□□□□□ -0.66
CPNE9-201ENST00000273027 NPHP3-ACAD11A0A0J9YXS1 232 aa10.91□□□□□ -0.66
CPNE9-201ENST00000273027 ARHGEF35A5YM69 484 aa10.91□□□□□ -0.66
CPNE9-201ENST00000273027 TMCO5BA8MYB1 307 aa10.91□□□□□ -0.66
CPNE9-201ENST00000273027 F8VZ95 297 aa10.91□□□□□ -0.66
CPNE9-201ENST00000273027 MEIS1O00470 390 aa10.91□□□□□ -0.66
CPNE9-201ENST00000273027 KRIT1O00522 736 aa10.91□□□□□ -0.66
CPNE9-201ENST00000273027 PODXLO00592 558 aa10.91□□□□□ -0.66
CPNE9-201ENST00000273027 RAD51CO43502 376 aa10.91□□□□□ -0.66
CPNE9-201ENST00000273027 EVI5O60447 810 aa10.91□□□□□ -0.66
CPNE9-201ENST00000273027 DKC1O60832 514 aaKnown RBP eCLIP10.91□□□□□ -0.66
CPNE9-201ENST00000273027 P4HBP07237 508 aaKnown RBP10.91□□□□□ -0.66
CPNE9-201ENST00000273027 GJB1P08034 283 aa10.91□□□□□ -0.66
CPNE9-201ENST00000273027 CETPP11597 493 aa10.91□□□□□ -0.66
CPNE9-201ENST00000273027 GZMAP12544 262 aa10.91□□□□□ -0.66
CPNE9-201ENST00000273027 CCL5P13501 91 aa10.91□□□□□ -0.66
CPNE9-201ENST00000273027 NR1D1P20393 614 aa10.91□□□□□ -0.66
CPNE9-201ENST00000273027 TNFAIP3P21580 790 aa10.91□□□□□ -0.66
CPNE9-201ENST00000273027 GRK4P32298 578 aa10.91□□□□□ -0.66
CPNE9-201ENST00000273027 STAT3P40763 770 aa10.91□□□□□ -0.66
CPNE9-201ENST00000273027 PSMC4P43686 418 aa10.91□□□□□ -0.66
CPNE9-201ENST00000273027 CARSP49589 748 aaKnown RBP10.91□□□□□ -0.66
CPNE9-201ENST00000273027 CASP5P51878 434 aa10.91□□□□□ -0.66
CPNE9-201ENST00000273027 PRMT2P55345 433 aa10.91□□□□□ -0.66
CPNE9-201ENST00000273027 PSMC6P62333 389 aa10.91□□□□□ -0.66
CPNE9-201ENST00000273027 GNGT1P63211 74 aa10.91□□□□□ -0.66
CPNE9-201ENST00000273027 ARID5AQ03989 594 aa10.91□□□□□ -0.66
CPNE9-201ENST00000273027 PPATQ06203 517 aa10.91□□□□□ -0.66
CPNE9-201ENST00000273027 DCAF17Q5H9S7 520 aaPredicted RBP10.91□□□□□ -0.66
CPNE9-201ENST00000273027 C11orf63Q6NUN7 778 aa10.91□□□□□ -0.66
CPNE9-201ENST00000273027 DAAM2Q86T65 1068 aa10.91□□□□□ -0.66
CPNE9-201ENST00000273027 CLEC10AQ8IUN9 316 aa10.91□□□□□ -0.66
CPNE9-201ENST00000273027 CDAN1Q8IWY9 1227 aa10.91□□□□□ -0.66
CPNE9-201ENST00000273027 METTL13Q8N6R0 699 aa10.91□□□□□ -0.66
CPNE9-201ENST00000273027 UBL4BQ8N7F7 174 aa10.91□□□□□ -0.66
CPNE9-201ENST00000273027 RDM1Q8NG50 284 aa10.91□□□□□ -0.66
CPNE9-201ENST00000273027 RAET1EQ8TD07 263 aa10.91□□□□□ -0.66
CPNE9-201ENST00000273027 CASKIN2Q8WXE0 1202 aa10.91□□□□□ -0.66
CPNE9-201ENST00000273027 ACCSQ96QU6 501 aa10.91□□□□□ -0.66
CPNE9-201ENST00000273027 FGFBP2Q9BYJ0 223 aa10.91□□□□□ -0.66
CPNE9-201ENST00000273027 RNF208Q9H0X6 261 aa10.91□□□□□ -0.66
CPNE9-201ENST00000273027 EPN3Q9H201 632 aa10.91□□□□□ -0.66
CPNE9-201ENST00000273027 TDRD3Q9H7E2 651 aaKnown RBP10.91□□□□□ -0.66
CPNE9-201ENST00000273027 CNOT10Q9H9A5 744 aaKnown RBP10.91□□□□□ -0.66
CPNE9-201ENST00000273027 XPO5Q9HAV4 1204 aaKnown RBP eCLIP10.91□□□□□ -0.66
CPNE9-201ENST00000273027 TMBIM4Q9HC24 238 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms