RNA–Protein interactions for RNA: ENST00000272395.2

TRIM43-201, Transcript of tripartite motif containing 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM43, Length 1,682 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43-201ENST00000272395 DEFB118Q96PH6 123 aa9.51□□□□□ -0.89
TRIM43-201ENST00000272395 MPHOSPH6Q99547 160 aaKnown RBP9.51□□□□□ -0.89
TRIM43-201ENST00000272395 ABHD16BQ9H3Z7 469 aa9.51□□□□□ -0.89
TRIM43-201ENST00000272395 METTL14Q9HCE5 456 aaKnown RBP9.51□□□□□ -0.89
TRIM43-201ENST00000272395 VTA1Q9NP79 307 aa9.51□□□□□ -0.89
TRIM43-201ENST00000272395 FBXL5Q9UKA1 691 aa9.51□□□□□ -0.89
TRIM43-201ENST00000272395 DNM3Q9UQ16 869 aa9.51□□□□□ -0.89
TRIM43-201ENST00000272395 BRCA2P51587 3418 aa9.51□□□□□ -0.89
TRIM43-201ENST00000272395 LOC102724159A0A0B4J2E5 919 aa9.5□□□□□ -0.89
TRIM43-201ENST00000272395 POTEB3A0JP26 581 aa9.5□□□□□ -0.89
TRIM43-201ENST00000272395 GOLGA8KD6RF30 607 aa9.5□□□□□ -0.89
TRIM43-201ENST00000272395 E9PMD0 336 aa9.5□□□□□ -0.89
TRIM43-201ENST00000272395 SEPT4O43236 478 aa9.5□□□□□ -0.89
TRIM43-201ENST00000272395 CALUO43852 315 aaPredicted RBP9.5□□□□□ -0.89
TRIM43-201ENST00000272395 SMPD1P17405 629 aa9.5□□□□□ -0.89
TRIM43-201ENST00000272395 RPL13P26373 211 aaKnown RBP9.5□□□□□ -0.89
TRIM43-201ENST00000272395 CIITAP33076 1130 aa9.5□□□□□ -0.89
TRIM43-201ENST00000272395 APBA1Q02410 837 aa9.5□□□□□ -0.89
TRIM43-201ENST00000272395 SPIRE1Q08AE8 756 aa9.5□□□□□ -0.89
TRIM43-201ENST00000272395 KLHL30Q0D2K2 578 aa9.5□□□□□ -0.89
TRIM43-201ENST00000272395 PWP2Q15269 919 aaKnown RBP9.5□□□□□ -0.89
TRIM43-201ENST00000272395 ASIC2Q16515 512 aa9.5□□□□□ -0.89
TRIM43-201ENST00000272395 LY6KQ17RY6 165 aa9.5□□□□□ -0.89
TRIM43-201ENST00000272395 BMT2Q1RMZ1 405 aa9.5□□□□□ -0.89
TRIM43-201ENST00000272395 LHX8Q68G74 356 aa9.5□□□□□ -0.89
TRIM43-201ENST00000272395 NFRKBQ6P4R8 1299 aa9.5□□□□□ -0.89
TRIM43-201ENST00000272395 POTEBQ6S5H4 581 aa9.5□□□□□ -0.89
TRIM43-201ENST00000272395 GBP6Q6ZN66 633 aa9.5□□□□□ -0.89
TRIM43-201ENST00000272395 IFT20Q8IY31 132 aa9.5□□□□□ -0.89
TRIM43-201ENST00000272395 SYT2Q8N9I0 419 aaPredicted RBP9.5□□□□□ -0.89
TRIM43-201ENST00000272395 EIF1ADQ8N9N8 165 aaKnown RBP9.5□□□□□ -0.89
TRIM43-201ENST00000272395 COPS5Q92905 334 aa9.5□□□□□ -0.89
TRIM43-201ENST00000272395 LRRC1Q9BTT6 524 aa9.5□□□□□ -0.89
TRIM43-201ENST00000272395 WDR11Q9BZH6 1224 aa9.5□□□□□ -0.89
TRIM43-201ENST00000272395 GANQ9H2C0 597 aa9.5□□□□□ -0.89
TRIM43-201ENST00000272395 EHMT1Q9H9B1 1298 aa9.5□□□□□ -0.89
TRIM43-201ENST00000272395 NLRC4Q9NPP4 1024 aa9.5□□□□□ -0.89
TRIM43-201ENST00000272395 PAK6Q9NQU5 681 aaPredicted RBP9.5□□□□□ -0.89
TRIM43-201ENST00000272395 ARMCX3Q9UH62 379 aaPredicted RBP9.5□□□□□ -0.89
TRIM43-201ENST00000272395 DDX20Q9UHI6 824 aaKnown RBP9.5□□□□□ -0.89
TRIM43-201ENST00000272395 PLXNA1Q9UIW2 1896 aa9.49□□□□□ -0.89
TRIM43-201ENST00000272395 GTPBP10A4D1E9 387 aaKnown RBP9.49□□□□□ -0.89
TRIM43-201ENST00000272395 POTEFA5A3E0 1075 aa9.49□□□□□ -0.89
TRIM43-201ENST00000272395 CCDC85CA6NKD9 419 aa9.49□□□□□ -0.89
TRIM43-201ENST00000272395 FAM86B1E9PN63 330 aa9.49□□□□□ -0.89
TRIM43-201ENST00000272395 SLC16A3O15427 465 aaKnown RBP9.49□□□□□ -0.89
TRIM43-201ENST00000272395 SHOX2O60902 331 aaPredicted RBP9.49□□□□□ -0.89
TRIM43-201ENST00000272395 MED24O75448 989 aa9.49□□□□□ -0.89
TRIM43-201ENST00000272395 GFPT2O94808 682 aa9.49□□□□□ -0.89
TRIM43-201ENST00000272395 CYP3A4P08684 503 aa9.49□□□□□ -0.89
TRIM43-201ENST00000272395 FAM86B2P0C5J1 330 aa9.49□□□□□ -0.89
TRIM43-201ENST00000272395 EPB41P11171 864 aaKnown RBP9.49□□□□□ -0.89
TRIM43-201ENST00000272395 AKR1A1P14550 325 aa9.49□□□□□ -0.89
TRIM43-201ENST00000272395 GAP43P17677 238 aa9.49□□□□□ -0.89
TRIM43-201ENST00000272395 NR2F2P24468 414 aa9.49□□□□□ -0.89
TRIM43-201ENST00000272395 TNFAIP2Q03169 654 aa9.49□□□□□ -0.89
TRIM43-201ENST00000272395 KCNH2Q12809 1159 aa9.49□□□□□ -0.89
TRIM43-201ENST00000272395 PPFIA1Q13136 1202 aa9.49□□□□□ -0.89
TRIM43-201ENST00000272395 GIT2Q14161 759 aa9.49□□□□□ -0.89
TRIM43-201ENST00000272395 KNOP1Q1ED39 458 aaKnown RBP9.49□□□□□ -0.89
TRIM43-201ENST00000272395 ARSHQ5FYA8 562 aa9.49□□□□□ -0.89
TRIM43-201ENST00000272395 MEI1Q5TIA1 1274 aa9.49□□□□□ -0.89
TRIM43-201ENST00000272395 C8orf74Q6P047 294 aa9.49□□□□□ -0.89
TRIM43-201ENST00000272395 NELFCDQ8IXH7 590 aa9.49□□□□□ -0.89
TRIM43-201ENST00000272395 DRC1Q96MC2 740 aa9.49□□□□□ -0.89
TRIM43-201ENST00000272395 SH3GL2Q99962 352 aa9.49□□□□□ -0.89
TRIM43-201ENST00000272395 POLR3CQ9BUI4 534 aaPredicted RBP9.49□□□□□ -0.89
TRIM43-201ENST00000272395 BCAS3Q9H6U6 928 aa9.49□□□□□ -0.89
TRIM43-201ENST00000272395 PKD2L1Q9P0L9 805 aa9.49□□□□□ -0.89
TRIM43-201ENST00000272395 SALL4Q9UJQ4 1053 aa9.49□□□□□ -0.89
TRIM43-201ENST00000272395 DAAM1Q9Y4D1 1078 aa9.49□□□□□ -0.89
TRIM43-201ENST00000272395 UBIAD1Q9Y5Z9 338 aa9.49□□□□□ -0.89
TRIM43-201ENST00000272395 ZNFX1Q9P2E3 1918 aaKnown RBP9.49□□□□□ -0.89
TRIM43-201ENST00000272395 LRRC37A2A6NM11 1700 aa9.49□□□□□ -0.89
TRIM43-201ENST00000272395 RBM47A0AV96 593 aaKnown RBP9.48□□□□□ -0.89
TRIM43-201ENST00000272395 PHACTR2O75167 634 aa9.48□□□□□ -0.89
TRIM43-201ENST00000272395 PGK1P00558 417 aa9.48□□□□□ -0.89
TRIM43-201ENST00000272395 AFPP02771 609 aaKnown RBP9.48□□□□□ -0.89
TRIM43-201ENST00000272395 MYBL2P10244 700 aa9.48□□□□□ -0.89
TRIM43-201ENST00000272395 TXNP10599 105 aaKnown RBP9.48□□□□□ -0.89
TRIM43-201ENST00000272395 ZNF76P36508 570 aa9.48□□□□□ -0.89
TRIM43-201ENST00000272395 GGCXP38435 758 aa9.48□□□□□ -0.89
TRIM43-201ENST00000272395 PRKCIP41743 596 aa9.48□□□□□ -0.89
TRIM43-201ENST00000272395 NAP1L1P55209 391 aaKnown RBP9.48□□□□□ -0.89
TRIM43-201ENST00000272395 SOX10P56693 466 aa9.48□□□□□ -0.89
TRIM43-201ENST00000272395 SP2Q02086 613 aa9.48□□□□□ -0.89
TRIM43-201ENST00000272395 RAD51AP2Q09MP3 1159 aa9.48□□□□□ -0.89
TRIM43-201ENST00000272395 PAK2Q13177 524 aa9.48□□□□□ -0.89
TRIM43-201ENST00000272395 RAPGEF1Q13905 1077 aa9.48□□□□□ -0.89
TRIM43-201ENST00000272395 NFIL3Q16649 462 aa9.48□□□□□ -0.89
TRIM43-201ENST00000272395 KIAA0753Q2KHM9 967 aa9.48□□□□□ -0.89
TRIM43-201ENST00000272395 CCDC62Q6P9F0 684 aa9.48□□□□□ -0.89
TRIM43-201ENST00000272395 SND1Q7KZF4 910 aaKnown RBP eCLIP9.48□□□□□ -0.89
TRIM43-201ENST00000272395 VPS36Q86VN1 386 aa9.48□□□□□ -0.89
TRIM43-201ENST00000272395 CATSPER3Q86XQ3 398 aa9.48□□□□□ -0.89
TRIM43-201ENST00000272395 FMNL3Q8IVF7 1028 aa9.48□□□□□ -0.89
TRIM43-201ENST00000272395 FAM76AQ8TAV0 307 aa9.48□□□□□ -0.89
TRIM43-201ENST00000272395 SCFD2Q8WU76 684 aa9.48□□□□□ -0.89
TRIM43-201ENST00000272395 INPP4AQ96PE3 977 aaPredicted RBP9.48□□□□□ -0.89
TRIM43-201ENST00000272395 MXRA8Q9BRK3 442 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms