RNA–Protein interactions for RNA: ENST00000269138.9

SS18-202, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2

Gene SS18, Length 1,548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-202ENST00000269138 MYOGP15173 224 aa14.05□□□□□ -0.16
SS18-202ENST00000269138 PBX2P40425 430 aa14.05□□□□□ -0.16
SS18-202ENST00000269138 SMTNP53814 917 aa14.05□□□□□ -0.16
SS18-202ENST00000269138 NCKAP1LP55160 1127 aa14.05□□□□□ -0.16
SS18-202ENST00000269138 FAM189BP81408 668 aa14.05□□□□□ -0.16
SS18-202ENST00000269138 FAM160A1Q05DH4 1040 aa14.05□□□□□ -0.16
SS18-202ENST00000269138 MAPK6Q16659 721 aa14.05□□□□□ -0.16
SS18-202ENST00000269138 FAM187BQ17R55 369 aa14.05□□□□□ -0.16
SS18-202ENST00000269138 HERC4Q5GLZ8 1057 aaPredicted RBP14.05□□□□□ -0.16
SS18-202ENST00000269138 HABP4Q5JVS0 413 aaKnown RBP14.05□□□□□ -0.16
SS18-202ENST00000269138 UBXN11Q5T124 520 aa14.05□□□□□ -0.16
SS18-202ENST00000269138 TWF2Q6IBS0 349 aaKnown RBP14.05□□□□□ -0.16
SS18-202ENST00000269138 CNNM4Q6P4Q7 775 aa14.05□□□□□ -0.16
SS18-202ENST00000269138 PPP4R3CPQ6ZMV5 832 aa14.05□□□□□ -0.16
SS18-202ENST00000269138 HAUS6Q7Z4H7 955 aa14.05□□□□□ -0.16
SS18-202ENST00000269138 CRIPAKQ8N1N5 446 aa14.05□□□□□ -0.16
SS18-202ENST00000269138 CNNM3Q8NE01 707 aa14.05□□□□□ -0.16
SS18-202ENST00000269138 PHOSPHO2Q8TCD6 241 aa14.05□□□□□ -0.16
SS18-202ENST00000269138 HPS3Q969F9 1004 aa14.05□□□□□ -0.16
SS18-202ENST00000269138 TOP1MTQ969P6 601 aa14.05□□□□□ -0.16
SS18-202ENST00000269138 FGFBP2Q9BYJ0 223 aa14.05□□□□□ -0.16
SS18-202ENST00000269138 TMEM134Q9H6X4 195 aa14.05□□□□□ -0.16
SS18-202ENST00000269138 PRMT7Q9NVM4 692 aaPredicted RBP14.05□□□□□ -0.16
SS18-202ENST00000269138 HSFX4A0A1B0GTS1 333 aaPredicted RBP14.05□□□□□ -0.16
SS18-202ENST00000269138 HSFX3A0A1B0GWH4 333 aaPredicted RBP14.05□□□□□ -0.16
SS18-202ENST00000269138 K7ENM7 598 aa14.05□□□□□ -0.16
SS18-202ENST00000269138 ACKR2O00590 384 aa14.05□□□□□ -0.16
SS18-202ENST00000269138 NR1I2O75469 434 aa14.05□□□□□ -0.16
SS18-202ENST00000269138 GAP43P17677 238 aa14.05□□□□□ -0.16
SS18-202ENST00000269138 SARSP49591 514 aaKnown RBP14.05□□□□□ -0.16
SS18-202ENST00000269138 COASYQ13057 564 aa14.05□□□□□ -0.16
SS18-202ENST00000269138 PRPF4BQ13523 1007 aaKnown RBP14.05□□□□□ -0.16
SS18-202ENST00000269138 PCBP1Q15365 356 aaKnown RBP eCLIP14.05□□□□□ -0.16
SS18-202ENST00000269138 LRIT3Q3SXY7 679 aa14.05□□□□□ -0.16
SS18-202ENST00000269138 ZC2HC1CQ53FD0 456 aaPredicted RBP14.05□□□□□ -0.16
SS18-202ENST00000269138 SLC24A5Q71RS6 500 aa14.05□□□□□ -0.16
SS18-202ENST00000269138 ECHDC2Q86YB7 292 aa14.05□□□□□ -0.16
SS18-202ENST00000269138 FAM178BQ8IXR5 827 aa14.05□□□□□ -0.16
SS18-202ENST00000269138 CCDC65Q8IXS2 484 aa14.05□□□□□ -0.16
SS18-202ENST00000269138 EIF2AQ9BY44 585 aaKnown RBP14.05□□□□□ -0.16
SS18-202ENST00000269138 C1orf112Q9NSG2 853 aa14.05□□□□□ -0.16
SS18-202ENST00000269138 MICAL3Q7RTP6 2002 aa14.04□□□□□ -0.16
SS18-202ENST00000269138 PHLPP2Q6ZVD8 1323 aa14.04□□□□□ -0.16
SS18-202ENST00000269138 CNTNAP2Q9UHC6 1331 aa14.04□□□□□ -0.16
SS18-202ENST00000269138 A0A1B0GUA9 196 aa14.04□□□□□ -0.16
SS18-202ENST00000269138 GTPBP6O43824 516 aaPredicted RBP14.04□□□□□ -0.16
SS18-202ENST00000269138 GJB5O95377 273 aa14.04□□□□□ -0.16
SS18-202ENST00000269138 ATF7P17544 494 aaPredicted RBP14.04□□□□□ -0.16
SS18-202ENST00000269138 AXLP30530 894 aa14.04□□□□□ -0.16
SS18-202ENST00000269138 GATMP50440 423 aa14.04□□□□□ -0.16
SS18-202ENST00000269138 UBE2HP62256 183 aa14.04□□□□□ -0.16
SS18-202ENST00000269138 EEF1DP3Q658K8 133 aa14.04□□□□□ -0.16
SS18-202ENST00000269138 ZNF720Q7Z2F6 126 aa14.04□□□□□ -0.16
SS18-202ENST00000269138 RNF169Q8NCN4 708 aa14.04□□□□□ -0.16
SS18-202ENST00000269138 GLIS3Q8NEA6 775 aa14.04□□□□□ -0.16
SS18-202ENST00000269138 PRIMPOLQ96LW4 560 aa14.04□□□□□ -0.16
SS18-202ENST00000269138 ZBED2Q9BTP6 218 aa14.04□□□□□ -0.16
SS18-202ENST00000269138 TARS2Q9BW92 718 aaKnown RBP14.04□□□□□ -0.16
SS18-202ENST00000269138 PDZD7Q9H5P4 517 aa14.04□□□□□ -0.16
SS18-202ENST00000269138 DACT1Q9NYF0 836 aa14.04□□□□□ -0.16
SS18-202ENST00000269138 KCNG1Q9UIX4 513 aa14.04□□□□□ -0.16
SS18-202ENST00000269138 YBX2Q9Y2T7 364 aaKnown RBP14.04□□□□□ -0.16
SS18-202ENST00000269138 A0A0U1RQF3 1178 aa14.03□□□□□ -0.16
SS18-202ENST00000269138 KLRC4O43908 158 aa14.03□□□□□ -0.16
SS18-202ENST00000269138 CASP5P51878 434 aa14.03□□□□□ -0.16
SS18-202ENST00000269138 NCBP1Q09161 790 aaKnown RBP14.03□□□□□ -0.16
SS18-202ENST00000269138 TMEM132AQ24JP5 1023 aa14.03□□□□□ -0.16
SS18-202ENST00000269138 NOTUMQ6P988 496 aa14.03□□□□□ -0.16
SS18-202ENST00000269138 FAM43BQ6ZT52 329 aaPredicted RBP14.03□□□□□ -0.16
SS18-202ENST00000269138 UNC13DQ70J99 1090 aa14.03□□□□□ -0.16
SS18-202ENST00000269138 ZNF598Q86UK7 904 aaKnown RBP14.03□□□□□ -0.16
SS18-202ENST00000269138 NPAS4Q8IUM7 802 aa14.03□□□□□ -0.16
SS18-202ENST00000269138 LPPQ93052 612 aa14.03□□□□□ -0.16
SS18-202ENST00000269138 LRCH3Q96II8 777 aa14.03□□□□□ -0.16
SS18-202ENST00000269138 ACO2Q99798 780 aaKnown RBP14.03□□□□□ -0.16
SS18-202ENST00000269138 PBX4Q9BYU1 374 aa14.03□□□□□ -0.16
SS18-202ENST00000269138 IKZF4Q9H2S9 585 aa14.03□□□□□ -0.16
SS18-202ENST00000269138 MRPL44Q9H9J2 332 aaKnown RBP14.03□□□□□ -0.16
SS18-202ENST00000269138 LMBRD1Q9NUN5 540 aa14.03□□□□□ -0.16
SS18-202ENST00000269138 FAM105AQ9NUU6 356 aa14.03□□□□□ -0.16
SS18-202ENST00000269138 RNF19AQ9NV58 838 aa14.03□□□□□ -0.16
SS18-202ENST00000269138 SEL1LQ9UBV2 794 aa14.03□□□□□ -0.16
SS18-202ENST00000269138 TBX20Q9UMR3 447 aa14.03□□□□□ -0.16
SS18-202ENST00000269138 PCDHB7Q9Y5E2 793 aa14.03□□□□□ -0.16
SS18-202ENST00000269138 PCDHB2Q9Y5E7 798 aa14.03□□□□□ -0.16
SS18-202ENST00000269138 PTPRSQ13332 1948 aa14.03□□□□□ -0.16
SS18-202ENST00000269138 LCHNA4D1U4 455 aa14.02□□□□□ -0.16
SS18-202ENST00000269138 MEIS3P2A8K0S8 358 aa14.02□□□□□ -0.16
SS18-202ENST00000269138 TLL1O43897 1013 aa14.02□□□□□ -0.16
SS18-202ENST00000269138 ARHGEF15O94989 841 aa14.02□□□□□ -0.16
SS18-202ENST00000269138 NPTXRO95502 500 aa14.02□□□□□ -0.16
SS18-202ENST00000269138 MYBP10242 640 aa14.02□□□□□ -0.16
SS18-202ENST00000269138 FGFR1P11362 822 aa14.02□□□□□ -0.16
SS18-202ENST00000269138 SMAD3P84022 425 aaKnown RBP14.02□□□□□ -0.16
SS18-202ENST00000269138 GTF2BQ00403 316 aa14.02□□□□□ -0.16
SS18-202ENST00000269138 STRN3Q13033 797 aa14.02□□□□□ -0.16
SS18-202ENST00000269138 ATF7IP2Q5U623 682 aa14.02□□□□□ -0.16
SS18-202ENST00000269138 SMG8Q8ND04 991 aaKnown RBP14.02□□□□□ -0.16
SS18-202ENST00000269138 ZBTB45Q96K62 511 aaPredicted RBP14.02□□□□□ -0.16
SS18-202ENST00000269138 GBP4Q96PP9 640 aa14.02□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms