RNA–Protein interactions for RNA: ENST00000265038.9

ERCC8-201, Transcript of ERCC excision repair 8, CSA ubiquitin ligase complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ERCC8, Length 2,017 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC8-201ENST00000265038 HOXA2O43364 376 aa9.31□□□□□ -0.92
ERCC8-201ENST00000265038 EDN1P05305 212 aa9.31□□□□□ -0.92
ERCC8-201ENST00000265038 SKIP12755 728 aa9.31□□□□□ -0.92
ERCC8-201ENST00000265038 RAB27AP51159 221 aa9.31□□□□□ -0.92
ERCC8-201ENST00000265038 DHX8Q14562 1220 aaKnown RBP9.31□□□□□ -0.92
ERCC8-201ENST00000265038 AXDND1Q5T1B0 1012 aaPredicted RBP9.31□□□□□ -0.92
ERCC8-201ENST00000265038 AGMOQ6ZNB7 445 aa9.31□□□□□ -0.92
ERCC8-201ENST00000265038 GPBP1Q86WP2 473 aa9.31□□□□□ -0.92
ERCC8-201ENST00000265038 CDR2LQ86X02 465 aaPredicted RBP9.31□□□□□ -0.92
ERCC8-201ENST00000265038 ZBTB8OSQ8IWT0 167 aa9.31□□□□□ -0.92
ERCC8-201ENST00000265038 RASSF8Q8NHQ8 419 aa9.31□□□□□ -0.92
ERCC8-201ENST00000265038 MAFAQ8NHW3 353 aaPredicted RBP9.31□□□□□ -0.92
ERCC8-201ENST00000265038 HELQQ8TDG4 1101 aa9.31□□□□□ -0.92
ERCC8-201ENST00000265038 PRIMPOLQ96LW4 560 aa9.31□□□□□ -0.92
ERCC8-201ENST00000265038 DRC1Q96MC2 740 aa9.31□□□□□ -0.92
ERCC8-201ENST00000265038 NTPCRQ9BSD7 190 aaKnown RBP9.31□□□□□ -0.92
ERCC8-201ENST00000265038 PANK2Q9BZ23 570 aa9.31□□□□□ -0.92
ERCC8-201ENST00000265038 PRMT7Q9NVM4 692 aaPredicted RBP9.31□□□□□ -0.92
ERCC8-201ENST00000265038 KCND2Q9NZV8 630 aa9.31□□□□□ -0.92
ERCC8-201ENST00000265038 CCDC39Q9UFE4 941 aa9.31□□□□□ -0.92
ERCC8-201ENST00000265038 RCOR1Q9UKL0 485 aa9.31□□□□□ -0.92
ERCC8-201ENST00000265038 MICAL3Q7RTP6 2002 aa9.3□□□□□ -0.92
ERCC8-201ENST00000265038 WDR81Q562E7 1941 aa9.3□□□□□ -0.92
ERCC8-201ENST00000265038 CCDC169A6NNP5 214 aa9.3□□□□□ -0.92
ERCC8-201ENST00000265038 ACKR2O00590 384 aa9.3□□□□□ -0.92
ERCC8-201ENST00000265038 OFD1O75665 1012 aa9.3□□□□□ -0.92
ERCC8-201ENST00000265038 PRKCBP05771 671 aa9.3□□□□□ -0.92
ERCC8-201ENST00000265038 RB1P06400 928 aa9.3□□□□□ -0.92
ERCC8-201ENST00000265038 PLS3P13797 630 aa9.3□□□□□ -0.92
ERCC8-201ENST00000265038 LIG1P18858 919 aa9.3□□□□□ -0.92
ERCC8-201ENST00000265038 NCLP19338 710 aaKnown RBP9.3□□□□□ -0.92
ERCC8-201ENST00000265038 CTNNB1P35222 781 aa9.3□□□□□ -0.92
ERCC8-201ENST00000265038 NCBP1Q09161 790 aaKnown RBP9.3□□□□□ -0.92
ERCC8-201ENST00000265038 GPM6BQ13491 265 aa9.3□□□□□ -0.92
ERCC8-201ENST00000265038 GIT2Q14161 759 aa9.3□□□□□ -0.92
ERCC8-201ENST00000265038 MAPK6Q16659 721 aa9.3□□□□□ -0.92
ERCC8-201ENST00000265038 RRAGBQ5VZM2 374 aa9.3□□□□□ -0.92
ERCC8-201ENST00000265038 NOTUMQ6P988 496 aa9.3□□□□□ -0.92
ERCC8-201ENST00000265038 SHC4Q6S5L8 630 aa9.3□□□□□ -0.92
ERCC8-201ENST00000265038 TAS1R3Q7RTX0 852 aa9.3□□□□□ -0.92
ERCC8-201ENST00000265038 LARP4BQ92615 738 aaKnown RBP9.3□□□□□ -0.92
ERCC8-201ENST00000265038 CCDC51Q96ER9 411 aa9.3□□□□□ -0.92
ERCC8-201ENST00000265038 RNF39Q9H2S5 420 aa9.3□□□□□ -0.92
ERCC8-201ENST00000265038 C17orf75Q9HAS0 396 aa9.3□□□□□ -0.92
ERCC8-201ENST00000265038 ARHGAP28Q9P2N2 729 aa9.3□□□□□ -0.92
ERCC8-201ENST00000265038 PCDHA7Q9UN72 937 aa9.3□□□□□ -0.92
ERCC8-201ENST00000265038 RWDD3Q9Y3V2 267 aa9.3□□□□□ -0.92
ERCC8-201ENST00000265038 IPPQ9Y573 584 aa9.3□□□□□ -0.92
ERCC8-201ENST00000265038 LAMA2P24043 3122 aaKnown RBP9.3□□□□□ -0.92
ERCC8-201ENST00000265038 TTC3P53804 2025 aa9.3□□□□□ -0.92
ERCC8-201ENST00000265038 CNTNAP2Q9UHC6 1331 aa9.29□□□□□ -0.92
ERCC8-201ENST00000265038 CUTAO60888 179 aa9.29□□□□□ -0.92
ERCC8-201ENST00000265038 EFNA5P52803 228 aa9.29□□□□□ -0.92
ERCC8-201ENST00000265038 DMP1Q13316 513 aaPredicted RBP9.29□□□□□ -0.92
ERCC8-201ENST00000265038 NT5DC1Q5TFE4 455 aa9.29□□□□□ -0.92
ERCC8-201ENST00000265038 ABI1Q8IZP0 508 aa9.29□□□□□ -0.92
ERCC8-201ENST00000265038 KCNG4Q8TDN1 519 aa9.29□□□□□ -0.92
ERCC8-201ENST00000265038 SPIRE2Q8WWL2 714 aa9.29□□□□□ -0.92
ERCC8-201ENST00000265038 REEP2Q9BRK0 252 aa9.29□□□□□ -0.92
ERCC8-201ENST00000265038 PLVAPQ9BX97 442 aa9.29□□□□□ -0.92
ERCC8-201ENST00000265038 TMEM134Q9H6X4 195 aa9.29□□□□□ -0.92
ERCC8-201ENST00000265038 KMT5AQ9NQR1 393 aa9.29□□□□□ -0.92
ERCC8-201ENST00000265038 STK17AQ9UEE5 414 aa9.29□□□□□ -0.92
ERCC8-201ENST00000265038 CFAP45Q9UL16 551 aa9.29□□□□□ -0.92
ERCC8-201ENST00000265038 HES2Q9Y543 173 aa9.29□□□□□ -0.92
ERCC8-201ENST00000265038 K7ERI5 159 aa9.29□□□□□ -0.92
ERCC8-201ENST00000265038 GRM6O15303 877 aa9.29□□□□□ -0.92
ERCC8-201ENST00000265038 SLC16A4O15374 487 aa9.29□□□□□ -0.92
ERCC8-201ENST00000265038 NPTXRO95502 500 aa9.29□□□□□ -0.92
ERCC8-201ENST00000265038 TXLNAP40222 546 aa9.29□□□□□ -0.92
ERCC8-201ENST00000265038 AFF1P51825 1210 aaKnown RBP9.29□□□□□ -0.92
ERCC8-201ENST00000265038 PRPF4BQ13523 1007 aaKnown RBP9.29□□□□□ -0.92
ERCC8-201ENST00000265038 CCDC85BQ15834 202 aaPredicted RBP9.29□□□□□ -0.92
ERCC8-201ENST00000265038 EEF1DP3Q658K8 133 aa9.29□□□□□ -0.92
ERCC8-201ENST00000265038 SLC27A1Q6PCB7 646 aa9.29□□□□□ -0.92
ERCC8-201ENST00000265038 KLHL23Q8NBE8 558 aa9.29□□□□□ -0.92
ERCC8-201ENST00000265038 TMEM161BQ8NDZ6 487 aa9.29□□□□□ -0.92
ERCC8-201ENST00000265038 CNNM3Q8NE01 707 aa9.29□□□□□ -0.92
ERCC8-201ENST00000265038 PPM1EQ8WY54 764 aa9.29□□□□□ -0.92
ERCC8-201ENST00000265038 PGBD4Q96DM1 585 aa9.29□□□□□ -0.92
ERCC8-201ENST00000265038 NXF3Q9H4D5 531 aaKnown RBP9.29□□□□□ -0.92
ERCC8-201ENST00000265038 PDZD7Q9H5P4 517 aa9.29□□□□□ -0.92
ERCC8-201ENST00000265038 LMCD1Q9NZU5 365 aa9.29□□□□□ -0.92
ERCC8-201ENST00000265038 ODF2LQ9ULJ1 636 aa9.29□□□□□ -0.92
ERCC8-201ENST00000265038 PLAGL2Q9UPG8 496 aa9.29□□□□□ -0.92
ERCC8-201ENST00000265038 RBM19Q9Y4C8 960 aaKnown RBP9.29□□□□□ -0.92
ERCC8-201ENST00000265038 GTPBP6O43824 516 aaPredicted RBP9.28□□□□□ -0.92
ERCC8-201ENST00000265038 ITGB1P05556 798 aa9.28□□□□□ -0.92
ERCC8-201ENST00000265038 ITGA4P13612 1032 aa9.28□□□□□ -0.92
ERCC8-201ENST00000265038 ZNF131P52739 623 aa9.28□□□□□ -0.92
ERCC8-201ENST00000265038 CAMK1Q14012 370 aa9.28□□□□□ -0.92
ERCC8-201ENST00000265038 E2F4Q16254 413 aa9.28□□□□□ -0.92
ERCC8-201ENST00000265038 NOMO2Q5JPE7 1267 aa9.28□□□□□ -0.92
ERCC8-201ENST00000265038 SPOUT1Q5T280 376 aaKnown RBP9.28□□□□□ -0.92
ERCC8-201ENST00000265038 GLB1LQ6UWU2 654 aa9.28□□□□□ -0.92
ERCC8-201ENST00000265038 CCDC73Q6ZRK6 1079 aa9.28□□□□□ -0.92
ERCC8-201ENST00000265038 LRRC43Q8N309 656 aa9.28□□□□□ -0.92
ERCC8-201ENST00000265038 PDILTQ8N807 584 aa9.28□□□□□ -0.92
ERCC8-201ENST00000265038 COLGALT1Q8NBJ5 622 aa9.28□□□□□ -0.92
ERCC8-201ENST00000265038 SPPL3Q8TCT6 385 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms