RNA–Protein interactions for RNA: ENST00000264723.8

CSPG5-201, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CSPG5, Length 4,080 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-201ENST00000264723 ERVK-9P63128 1117 aa21.3■■□□□ 1
CSPG5-201ENST00000264723 LACTBP83111 547 aaPredicted RBP21.3■■□□□ 1
CSPG5-201ENST00000264723 RINT1Q6NUQ1 792 aa21.3■■□□□ 1
CSPG5-201ENST00000264723 PACS2Q86VP3 889 aa21.3■■□□□ 1
CSPG5-201ENST00000264723 ARFGEF2Q9Y6D5 1785 aa21.3■■□□□ 1
CSPG5-201ENST00000264723 SPDYE2BA6NHP3 402 aa21.3■■□□□ 1
CSPG5-201ENST00000264723 SPDYE6P0CI01 402 aa21.3■■□□□ 1
CSPG5-201ENST00000264723 MTM1Q13496 603 aa21.3■■□□□ 1
CSPG5-201ENST00000264723 SESTD1Q86VW0 696 aa21.3■■□□□ 1
CSPG5-201ENST00000264723 ANAPC7Q9UJX3 599 aa21.3■■□□□ 1
CSPG5-201ENST00000264723 VAMP7P51809 220 aa21.29■■□□□ 1
CSPG5-201ENST00000264723 CXCL9Q07325 125 aa21.29■■□□□ 1
CSPG5-201ENST00000264723 BRDTQ58F21 947 aaPredicted RBP21.29■■□□□ 1
CSPG5-201ENST00000264723 DACT2Q5SW24 774 aa21.29■■□□□ 1
CSPG5-201ENST00000264723 SCYL2Q6P3W7 929 aa21.29■■□□□ 1
CSPG5-201ENST00000264723 INTS8Q75QN2 995 aaKnown RBP21.29■■□□□ 1
CSPG5-201ENST00000264723 CCDC13Q8IYE1 715 aa21.29■■□□□ 1
CSPG5-201ENST00000264723 RNF169Q8NCN4 708 aa21.29■■□□□ 1
CSPG5-201ENST00000264723 EPN3Q9H201 632 aa21.29■■□□□ 1
CSPG5-201ENST00000264723 FZD1Q9UP38 647 aa21.29■■□□□ 1
CSPG5-201ENST00000264723 AKT3Q9Y243 479 aa21.29■■□□□ 1
CSPG5-201ENST00000264723 RASSF10A6NK89 507 aa21.29■■□□□ 1
CSPG5-201ENST00000264723 PPP1R11O60927 126 aaPredicted RBP21.29■■□□□ 1
CSPG5-201ENST00000264723 PMS2P54278 862 aa21.29■■□□□ 1
CSPG5-201ENST00000264723 RPS6P62753 249 aaKnown RBP21.29■■□□□ 1
CSPG5-201ENST00000264723 MEI1Q5TIA1 1274 aa21.29■■□□□ 1
CSPG5-201ENST00000264723 DPP9Q86TI2 863 aa21.29■■□□□ 1
CSPG5-201ENST00000264723 KIFC3Q9BVG8 833 aa21.29■■□□□ 1
CSPG5-201ENST00000264723 KCNH7Q9NS40 1196 aa21.29■■□□□ 1
CSPG5-201ENST00000264723 HOMER3Q9NSC5 361 aa21.29■■□□□ 1
CSPG5-201ENST00000264723 FAM53CQ9NYF3 392 aa21.29■■□□□ 1
CSPG5-201ENST00000264723 ZNF233A6NK53 670 aa21.29■■□□□ 1
CSPG5-201ENST00000264723 EML1O00423 815 aa21.29■■□□□ 1
CSPG5-201ENST00000264723 MEFVO15553 781 aaPredicted RBP21.29■■□□□ 1
CSPG5-201ENST00000264723 ECEL1O95672 775 aa21.29■■□□□ 1
CSPG5-201ENST00000264723 CCDC137Q6PK04 289 aaKnown RBP21.29■■□□□ 1
CSPG5-201ENST00000264723 SYT2Q8N9I0 419 aaPredicted RBP21.29■■□□□ 1
CSPG5-201ENST00000264723 COL1A1P02452 1464 aaPredicted RBP21.29■■□□□ 1
CSPG5-201ENST00000264723 ALG6Q9Y672 507 aa21.29■■□□□ 1
CSPG5-201ENST00000264723 YWHABP31946 246 aaKnown RBP21.28■■□□□ 1
CSPG5-201ENST00000264723 NUGGCQ68CJ6 796 aa21.28■■□□□ 1
CSPG5-201ENST00000264723 ZNF526Q8TF50 670 aaPredicted RBP21.28■■□□□ 1
CSPG5-201ENST00000264723 ACP6Q9NPH0 428 aa21.28■■□□□ 1
CSPG5-201ENST00000264723 CNOT8Q9UFF9 292 aaKnown RBP21.28■■□□□ 1
CSPG5-201ENST00000264723 TTC7AQ9ULT0 858 aaPredicted RBP21.28■■□□□ 1
CSPG5-201ENST00000264723 TISP43B9A030 160 aa21.28■■□□□ 1
CSPG5-201ENST00000264723 DYNLT1P63172 113 aa21.28■■□□□ 1
CSPG5-201ENST00000264723 GPC5P78333 572 aa21.28■■□□□ 1
CSPG5-201ENST00000264723 FAM160B1Q5W0V3 765 aa21.28■■□□□ 1
CSPG5-201ENST00000264723 AADACL2Q6P093 401 aa21.28■■□□□ 1
CSPG5-201ENST00000264723 TAAR1Q96RJ0 339 aa21.28■■□□□ 1
CSPG5-201ENST00000264723 MSTO1Q9BUK6 570 aa21.28■■□□□ 1
CSPG5-201ENST00000264723 NUP85Q9BW27 656 aa21.28■■□□□ 1
CSPG5-201ENST00000264723 TTYH3Q9C0H2 523 aa21.28■■□□□ 1
CSPG5-201ENST00000264723 ATF2P15336 505 aa21.28■■□□□ 1
CSPG5-201ENST00000264723 PRLRP16471 622 aa21.28■■□□□ 1
CSPG5-201ENST00000264723 FAM47EQ6ZV65 393 aa21.28■■□□□ 1
CSPG5-201ENST00000264723 YARSP54577 528 aaKnown RBP21.27■■□□□ 1
CSPG5-201ENST00000264723 CCDC63Q8NA47 563 aa21.27■■□□□ 1
CSPG5-201ENST00000264723 AKT1S1Q96B36 256 aa21.27■■□□□ 1
CSPG5-201ENST00000264723 GPRC5CQ9NQ84 441 aa21.27■■□□□ 1
CSPG5-201ENST00000264723 TMEM150BA6NC51 233 aa21.27■■□□□ 1
CSPG5-201ENST00000264723 NFIBO00712 420 aa21.27■■□□□ 1
CSPG5-201ENST00000264723 PSMC5P62195 406 aa21.27■■□□□ 1
CSPG5-201ENST00000264723 KRT76Q01546 638 aa21.27■■□□□ 1
CSPG5-201ENST00000264723 STXBP2Q15833 593 aa21.27■■□□□ 1
CSPG5-201ENST00000264723 TMEM119Q4V9L6 283 aa21.27■■□□□ 1
CSPG5-201ENST00000264723 HOXC10Q9NYD6 342 aa21.27■■□□□ 1
CSPG5-201ENST00000264723 GGA3Q9NZ52 723 aa21.27■■□□□ 1
CSPG5-201ENST00000264723 TNNC2P02585 160 aa21.27■■□□□ 1
CSPG5-201ENST00000264723 CLNS1AP54105 237 aaKnown RBP21.27■■□□□ 1
CSPG5-201ENST00000264723 PPP2R5AQ15172 486 aa21.27■■□□□ 1
CSPG5-201ENST00000264723 FAM47CQ5HY64 1035 aa21.27■■□□□ 1
CSPG5-201ENST00000264723 ZNF354CQ86Y25 554 aa21.27■■□□□ 1
CSPG5-201ENST00000264723 SLC20A1Q8WUM9 679 aa21.27■■□□□ 1
CSPG5-201ENST00000264723 AGPAT1Q99943 283 aa21.27■■□□□ 1
CSPG5-201ENST00000264723 IQCGQ9H095 443 aaKnown RBP21.27■■□□□ 1
CSPG5-201ENST00000264723 FAM198AQ9UFP1 575 aa21.27■■□□□ 1
CSPG5-201ENST00000264723 KCNG1Q9UIX4 513 aa21.27■■□□□ 1
CSPG5-201ENST00000264723 ABCC6O95255 1503 aa21.26■□□□□ 0.99
CSPG5-201ENST00000264723 H0YCG3 227 aa21.26■□□□□ 0.99
CSPG5-201ENST00000264723 NR3C2P08235 984 aa21.26■□□□□ 0.99
CSPG5-201ENST00000264723 AARSP49588 968 aaKnown RBP eCLIP21.26■□□□□ 0.99
CSPG5-201ENST00000264723 FBF1Q8TES7 1133 aa21.26■□□□□ 0.99
CSPG5-201ENST00000264723 ISCUQ9H1K1 167 aa21.26■□□□□ 0.99
CSPG5-201ENST00000264723 APEX2Q9UBZ4 518 aa21.26■□□□□ 0.99
CSPG5-201ENST00000264723 PARP2Q9UGN5 583 aa21.26■□□□□ 0.99
CSPG5-201ENST00000264723 PCDHA10Q9Y5I2 948 aa21.26■□□□□ 0.99
CSPG5-201ENST00000264723 CAP2P40123 477 aa21.26■□□□□ 0.99
CSPG5-201ENST00000264723 PTGISQ16647 500 aa21.26■□□□□ 0.99
CSPG5-201ENST00000264723 PI4K2AQ9BTU6 479 aa21.26■□□□□ 0.99
CSPG5-201ENST00000264723 STK33Q9BYT3 514 aa21.26■□□□□ 0.99
CSPG5-201ENST00000264723 PPP1R9AQ9ULJ8 1098 aa21.26■□□□□ 0.99
CSPG5-201ENST00000264723 EIF4E1BA6NMX2 242 aaKnown RBP21.26■□□□□ 0.99
CSPG5-201ENST00000264723 PPP2R5EQ16537 467 aa21.26■□□□□ 0.99
CSPG5-201ENST00000264723 KLHL11Q9NVR0 708 aa21.26■□□□□ 0.99
CSPG5-201ENST00000264723 RNF181Q9P0P0 153 aa21.26■□□□□ 0.99
CSPG5-201ENST00000264723 WDR91A4D1P6 747 aa21.25■□□□□ 0.99
CSPG5-201ENST00000264723 AGPSO00116 658 aa21.25■□□□□ 0.99
CSPG5-201ENST00000264723 JAK3P52333 1124 aa21.25■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms