RNA–Protein interactions for RNA: ENST00000263202.14

UFD1-201, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UFD1, Length 1,814 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-201ENST00000263202 GTF2IRD1Q9UHL9 959 aa24.84■■□□□ 1.57
UFD1-201ENST00000263202 HNRNPDLO14979 420 aaKnown RBP24.83■■□□□ 1.57
UFD1-201ENST00000263202 TEX33O43247 280 aa24.83■■□□□ 1.57
UFD1-201ENST00000263202 PRKCSHP14314 528 aaPredicted RBP24.83■■□□□ 1.57
UFD1-201ENST00000263202 ADSSP30520 456 aa24.83■■□□□ 1.57
UFD1-201ENST00000263202 SLC9C1Q4G0N8 1177 aa24.83■■□□□ 1.57
UFD1-201ENST00000263202 MIIPQ5JXC2 388 aa24.83■■□□□ 1.57
UFD1-201ENST00000263202 IFNLR1Q8IU57 520 aaPredicted RBP24.83■■□□□ 1.57
UFD1-201ENST00000263202 PCIF1Q9H4Z3 704 aa24.83■■□□□ 1.57
UFD1-201ENST00000263202 A0A087WZ62 844 aa24.82■■□□□ 1.56
UFD1-201ENST00000263202 HSPA8P11142 646 aaKnown RBP24.82■■□□□ 1.56
UFD1-201ENST00000263202 GPC3P51654 580 aa24.82■■□□□ 1.56
UFD1-201ENST00000263202 ACLYP53396 1101 aa24.82■■□□□ 1.56
UFD1-201ENST00000263202 FRMD5Q7Z6J6 570 aa24.82■■□□□ 1.56
UFD1-201ENST00000263202 DRC7Q8IY82 874 aa24.82■■□□□ 1.56
UFD1-201ENST00000263202 SPC24Q8NBT2 197 aa24.82■■□□□ 1.56
UFD1-201ENST00000263202 PPP1R16BQ96T49 567 aa24.82■■□□□ 1.56
UFD1-201ENST00000263202 FDXACB1Q9BRP7 624 aaPredicted RBP24.82■■□□□ 1.56
UFD1-201ENST00000263202 MKNK1Q9BUB5 465 aa24.82■■□□□ 1.56
UFD1-201ENST00000263202 NOC4LQ9BVI4 516 aaKnown RBP24.82■■□□□ 1.56
UFD1-201ENST00000263202 FAM49AQ9H0Q0 323 aaPredicted RBP24.82■■□□□ 1.56
UFD1-201ENST00000263202 HSPBP1Q9NZL4 362 aa24.82■■□□□ 1.56
UFD1-201ENST00000263202 USP20Q9Y2K6 914 aa24.82■■□□□ 1.56
UFD1-201ENST00000263202 EPB41P11171 864 aaKnown RBP24.82■■□□□ 1.56
UFD1-201ENST00000263202 PSMC2P35998 433 aaKnown RBP24.82■■□□□ 1.56
UFD1-201ENST00000263202 PHKA2P46019 1235 aa24.82■■□□□ 1.56
UFD1-201ENST00000263202 LIG4P49917 911 aa24.82■■□□□ 1.56
UFD1-201ENST00000263202 MAPK6Q16659 721 aa24.82■■□□□ 1.56
UFD1-201ENST00000263202 MAN2A1Q16706 1144 aa24.82■■□□□ 1.56
UFD1-201ENST00000263202 TRIM59Q8IWR1 403 aa24.82■■□□□ 1.56
UFD1-201ENST00000263202 TSEN34Q9BSV6 310 aaKnown RBP24.82■■□□□ 1.56
UFD1-201ENST00000263202 MINDY3Q9H8M7 445 aa24.82■■□□□ 1.56
UFD1-201ENST00000263202 GRIN2DO15399 1336 aa24.81■■□□□ 1.56
UFD1-201ENST00000263202 LGALS16A8MUM7 142 aa24.81■■□□□ 1.56
UFD1-201ENST00000263202 CABYRO75952 493 aa24.81■■□□□ 1.56
UFD1-201ENST00000263202 PRKCBP05771 671 aa24.81■■□□□ 1.56
UFD1-201ENST00000263202 TPM2P07951 284 aa24.81■■□□□ 1.56
UFD1-201ENST00000263202 NLRP11P59045 1033 aaKnown RBP24.81■■□□□ 1.56
UFD1-201ENST00000263202 MBTD1Q05BQ5 628 aa24.81■■□□□ 1.56
UFD1-201ENST00000263202 PTPN21Q16825 1174 aa24.81■■□□□ 1.56
UFD1-201ENST00000263202 SESTD1Q86VW0 696 aa24.81■■□□□ 1.56
UFD1-201ENST00000263202 TARS2Q9BW92 718 aaKnown RBP24.81■■□□□ 1.56
UFD1-201ENST00000263202 FZD8Q9H461 694 aa24.81■■□□□ 1.56
UFD1-201ENST00000263202 FRMD4BQ9Y2L6 1034 aa24.81■■□□□ 1.56
UFD1-201ENST00000263202 STYXL1Q9Y6J8 313 aa24.81■■□□□ 1.56
UFD1-201ENST00000263202 MOXD2PA6NHM9 499 aa24.8■■□□□ 1.56
UFD1-201ENST00000263202 EXOC3O60645 756 aa24.8■■□□□ 1.56
UFD1-201ENST00000263202 GDF6Q6KF10 455 aaPredicted RBP24.8■■□□□ 1.56
UFD1-201ENST00000263202 ZNF410Q86VK4 478 aa24.8■■□□□ 1.56
UFD1-201ENST00000263202 VSTM4Q8IW00 320 aa24.8■■□□□ 1.56
UFD1-201ENST00000263202 FAM186BQ8IYM0 893 aa24.8■■□□□ 1.56
UFD1-201ENST00000263202 XXYLT1Q8NBI6 393 aa24.8■■□□□ 1.56
UFD1-201ENST00000263202 DNAJB3Q8WWF6 145 aa24.8■■□□□ 1.56
UFD1-201ENST00000263202 NLRP7Q8WX94 980 aa24.8■■□□□ 1.56
UFD1-201ENST00000263202 BORCS6Q96GS4 357 aa24.8■■□□□ 1.56
UFD1-201ENST00000263202 METTL14Q9HCE5 456 aaKnown RBP24.8■■□□□ 1.56
UFD1-201ENST00000263202 PAK6Q9NQU5 681 aaPredicted RBP24.8■■□□□ 1.56
UFD1-201ENST00000263202 ARMCX3Q9UH62 379 aaPredicted RBP24.8■■□□□ 1.56
UFD1-201ENST00000263202 INO80B-WBP1J3KQ70 363 aa24.79■■□□□ 1.56
UFD1-201ENST00000263202 GARTP22102 1010 aa24.79■■□□□ 1.56
UFD1-201ENST00000263202 PBX1P40424 430 aa24.79■■□□□ 1.56
UFD1-201ENST00000263202 VWA3BQ502W6 1294 aa24.79■■□□□ 1.56
UFD1-201ENST00000263202 ZPBP2Q6X784 338 aa24.79■■□□□ 1.56
UFD1-201ENST00000263202 ARRDC4Q8NCT1 418 aa24.79■■□□□ 1.56
UFD1-201ENST00000263202 POMGNT1Q8WZA1 660 aa24.79■■□□□ 1.56
UFD1-201ENST00000263202 MRPL4Q9BYD3 311 aaKnown RBP24.79■■□□□ 1.56
UFD1-201ENST00000263202 INO80BQ9C086 356 aaPredicted RBP24.79■■□□□ 1.56
UFD1-201ENST00000263202 ADAMTS10Q9H324 1103 aa24.79■■□□□ 1.56
UFD1-201ENST00000263202 TTLL13PA6NNM8 815 aa24.79■■□□□ 1.56
UFD1-201ENST00000263202 GPR32O75388 356 aa24.79■■□□□ 1.56
UFD1-201ENST00000263202 IQCF3P0C7M6 154 aa24.79■■□□□ 1.56
UFD1-201ENST00000263202 CDC42EP1Q00587 391 aa24.79■■□□□ 1.56
UFD1-201ENST00000263202 MTFR1Q15390 333 aa24.79■■□□□ 1.56
UFD1-201ENST00000263202 FAM47CQ5HY64 1035 aa24.79■■□□□ 1.56
UFD1-201ENST00000263202 ZSWIM2Q8NEG5 633 aa24.79■■□□□ 1.56
UFD1-201ENST00000263202 NDST4Q9H3R1 872 aa24.79■■□□□ 1.56
UFD1-201ENST00000263202 PES1O00541 588 aaKnown RBP24.78■■□□□ 1.56
UFD1-201ENST00000263202 ACKR2O00590 384 aa24.78■■□□□ 1.56
UFD1-201ENST00000263202 UBXN1Q04323 297 aa24.78■■□□□ 1.56
UFD1-201ENST00000263202 TMEM62Q0P6H9 643 aa24.78■■□□□ 1.56
UFD1-201ENST00000263202 KIZQ2M2Z5 673 aa24.78■■□□□ 1.56
UFD1-201ENST00000263202 TMC6Q7Z403 805 aa24.78■■□□□ 1.56
UFD1-201ENST00000263202 CTU1Q7Z7A3 348 aaKnown RBP24.78■■□□□ 1.56
UFD1-201ENST00000263202 ITGA7Q13683 1181 aa24.77■■□□□ 1.56
UFD1-201ENST00000263202 FAM187BQ17R55 369 aa24.77■■□□□ 1.56
UFD1-201ENST00000263202 RDH13Q8NBN7 331 aa24.77■■□□□ 1.56
UFD1-201ENST00000263202 ZBTB45Q96K62 511 aaPredicted RBP24.77■■□□□ 1.56
UFD1-201ENST00000263202 SCLT1Q96NL6 688 aa24.77■■□□□ 1.56
UFD1-201ENST00000263202 ACO2Q99798 780 aaKnown RBP24.77■■□□□ 1.56
UFD1-201ENST00000263202 HAPLN2Q9GZV7 340 aa24.77■■□□□ 1.56
UFD1-201ENST00000263202 PRMT7Q9NVM4 692 aaPredicted RBP24.77■■□□□ 1.56
UFD1-201ENST00000263202 UTP18Q9Y5J1 556 aaKnown RBP eCLIP24.77■■□□□ 1.56
UFD1-201ENST00000263202 MYCP01106 439 aaPredicted RBP24.77■■□□□ 1.56
UFD1-201ENST00000263202 CCL5P13501 91 aa24.77■■□□□ 1.56
UFD1-201ENST00000263202 SLFN12LQ6IEE8 588 aa24.77■■□□□ 1.56
UFD1-201ENST00000263202 TAF2Q6P1X5 1199 aa24.77■■□□□ 1.56
UFD1-201ENST00000263202 SRGAP1Q7Z6B7 1085 aa24.77■■□□□ 1.56
UFD1-201ENST00000263202 NME8Q8N427 588 aa24.77■■□□□ 1.56
UFD1-201ENST00000263202 VTI1AQ96AJ9 217 aa24.77■■□□□ 1.56
UFD1-201ENST00000263202 SAAL1Q96ER3 474 aa24.77■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms