RNA–Protein interactions for RNA: ENST00000258909.13

TM6SF1-201, Transcript of transmembrane 6 superfamily member 1, humanhuman

TSL 1 (best)

Gene TM6SF1, Length 1,469 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM6SF1-201ENST00000258909 CDH22Q9UJ99 828 aa21.18■□□□□ 0.98
TM6SF1-201ENST00000258909 LOC730098B7Z3J9 87 aa21.17■□□□□ 0.98
TM6SF1-201ENST00000258909 LYPLA2O95372 231 aa21.17■□□□□ 0.98
TM6SF1-201ENST00000258909 PLA2G5P39877 138 aa21.17■□□□□ 0.98
TM6SF1-201ENST00000258909 SLC11A1P49279 550 aa21.17■□□□□ 0.98
TM6SF1-201ENST00000258909 MRPL10Q7Z7H8 261 aaKnown RBP21.17■□□□□ 0.98
TM6SF1-201ENST00000258909 ASAP3Q8TDY4 903 aa21.17■□□□□ 0.98
TM6SF1-201ENST00000258909 SUSD6Q92537 303 aa21.17■□□□□ 0.98
TM6SF1-201ENST00000258909 IGSF21Q96ID5 467 aa21.17■□□□□ 0.98
TM6SF1-201ENST00000258909 CPB2Q96IY4 423 aa21.17■□□□□ 0.98
TM6SF1-201ENST00000258909 PHF7Q9BWX1 381 aaPredicted RBP21.17■□□□□ 0.98
TM6SF1-201ENST00000258909 ANKEF1Q9NU02 776 aa21.17■□□□□ 0.98
TM6SF1-201ENST00000258909 HCFC2Q9Y5Z7 792 aa21.17■□□□□ 0.98
TM6SF1-201ENST00000258909 TSPAN1O60635 241 aa21.16■□□□□ 0.98
TM6SF1-201ENST00000258909 CLASP2O75122 1294 aaKnown RBP21.16■□□□□ 0.98
TM6SF1-201ENST00000258909 DDHD2O94830 711 aa21.16■□□□□ 0.98
TM6SF1-201ENST00000258909 ERLIN2O94905 339 aa21.16■□□□□ 0.98
TM6SF1-201ENST00000258909 POMCP01189 267 aa21.16■□□□□ 0.98
TM6SF1-201ENST00000258909 RARRES1P49788 294 aa21.16■□□□□ 0.98
TM6SF1-201ENST00000258909 PTENP60484 403 aa21.16■□□□□ 0.98
TM6SF1-201ENST00000258909 MXD4Q14582 209 aaPredicted RBP21.16■□□□□ 0.98
TM6SF1-201ENST00000258909 SAFBQ15424 915 aaKnown RBP eCLIP21.16■□□□□ 0.98
TM6SF1-201ENST00000258909 HERC4Q5GLZ8 1057 aaPredicted RBP21.16■□□□□ 0.98
TM6SF1-201ENST00000258909 URGCPQ8TCY9 931 aa21.16■□□□□ 0.98
TM6SF1-201ENST00000258909 C8orf76Q96K31 380 aa21.16■□□□□ 0.98
TM6SF1-201ENST00000258909 CCDC43Q96MW1 224 aaKnown RBP21.16■□□□□ 0.98
TM6SF1-201ENST00000258909 EIF2AQ9BY44 585 aaKnown RBP21.16■□□□□ 0.98
TM6SF1-201ENST00000258909 ZBP1Q9H171 429 aa21.16■□□□□ 0.98
TM6SF1-201ENST00000258909 RSAD1Q9HA92 442 aa21.16■□□□□ 0.98
TM6SF1-201ENST00000258909 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP21.15■□□□□ 0.98
TM6SF1-201ENST00000258909 INO80B-WBP1J3KQ70 363 aa21.15■□□□□ 0.98
TM6SF1-201ENST00000258909 DGAT1O75907 488 aa21.15■□□□□ 0.98
TM6SF1-201ENST00000258909 SP100P23497 879 aaPredicted RBP21.15■□□□□ 0.98
TM6SF1-201ENST00000258909 CAPSQ13938 189 aa21.15■□□□□ 0.98
TM6SF1-201ENST00000258909 CBX2Q14781 532 aaPredicted RBP21.15■□□□□ 0.98
TM6SF1-201ENST00000258909 MAEAQ7L5Y9 396 aa21.15■□□□□ 0.98
TM6SF1-201ENST00000258909 SMG8Q8ND04 991 aaKnown RBP21.15■□□□□ 0.98
TM6SF1-201ENST00000258909 VN1R3Q9BXE9 311 aa21.15■□□□□ 0.98
TM6SF1-201ENST00000258909 RNF39Q9H2S5 420 aa21.15■□□□□ 0.98
TM6SF1-201ENST00000258909 MUC6Q6W4X9 2439 aa21.15■□□□□ 0.98
TM6SF1-201ENST00000258909 TECTAO75443 2155 aa21.15■□□□□ 0.98
TM6SF1-201ENST00000258909 WDFY4Q6ZS81 3184 aa21.15■□□□□ 0.98
TM6SF1-201ENST00000258909 USO1O60763 962 aaKnown RBP21.14■□□□□ 0.98
TM6SF1-201ENST00000258909 SPATA31C1P0DKV0 1188 aa21.14■□□□□ 0.98
TM6SF1-201ENST00000258909 GLRA2P23416 452 aa21.14■□□□□ 0.98
TM6SF1-201ENST00000258909 ARL2P36404 184 aa21.14■□□□□ 0.98
TM6SF1-201ENST00000258909 TFDP1Q14186 410 aa21.14■□□□□ 0.98
TM6SF1-201ENST00000258909 ZNF174Q15697 407 aa21.14■□□□□ 0.98
TM6SF1-201ENST00000258909 DDX53Q86TM3 631 aaKnown RBP21.14■□□□□ 0.98
TM6SF1-201ENST00000258909 RSPH1Q8WYR4 309 aa21.14■□□□□ 0.98
TM6SF1-201ENST00000258909 CASP10Q92851 521 aa21.14■□□□□ 0.98
TM6SF1-201ENST00000258909 HES2Q9Y543 173 aa21.14■□□□□ 0.98
TM6SF1-201ENST00000258909 IPPQ9Y573 584 aa21.14■□□□□ 0.98
TM6SF1-201ENST00000258909 MED24O75448 989 aa21.13■□□□□ 0.97
TM6SF1-201ENST00000258909 ITGA4P13612 1032 aa21.13■□□□□ 0.97
TM6SF1-201ENST00000258909 NCLP19338 710 aaKnown RBP21.13■□□□□ 0.97
TM6SF1-201ENST00000258909 MBTD1Q05BQ5 628 aa21.13■□□□□ 0.97
TM6SF1-201ENST00000258909 HFE2Q6ZVN8 426 aa21.13■□□□□ 0.97
TM6SF1-201ENST00000258909 CATSPER3Q86XQ3 398 aa21.13■□□□□ 0.97
TM6SF1-201ENST00000258909 KIF2CQ99661 725 aa21.13■□□□□ 0.97
TM6SF1-201ENST00000258909 POLR3FQ9H1D9 316 aaPredicted RBP21.13■□□□□ 0.97
TM6SF1-201ENST00000258909 GPRC5CQ9NQ84 441 aa21.13■□□□□ 0.97
TM6SF1-201ENST00000258909 CNTNAP2Q9UHC6 1331 aa21.13■□□□□ 0.97
TM6SF1-201ENST00000258909 SSBP05455 408 aaKnown RBP eCLIP21.13■□□□□ 0.97
TM6SF1-201ENST00000258909 CTSAP10619 480 aa21.13■□□□□ 0.97
TM6SF1-201ENST00000258909 HOXB8P17481 243 aaPredicted RBP21.13■□□□□ 0.97
TM6SF1-201ENST00000258909 BMS1Q14692 1282 aaKnown RBP21.13■□□□□ 0.97
TM6SF1-201ENST00000258909 KANK3Q6NY19 840 aa21.13■□□□□ 0.97
TM6SF1-201ENST00000258909 CDR2LQ86X02 465 aaPredicted RBP21.13■□□□□ 0.97
TM6SF1-201ENST00000258909 C12orf76Q8N812 135 aaPredicted RBP21.13■□□□□ 0.97
TM6SF1-201ENST00000258909 TMEM87AQ8NBN3 555 aa21.13■□□□□ 0.97
TM6SF1-201ENST00000258909 FAM193BQ96PV7 902 aaPredicted RBP21.13■□□□□ 0.97
TM6SF1-201ENST00000258909 APOL6Q9BWW8 343 aa21.13■□□□□ 0.97
TM6SF1-201ENST00000258909 B4GALT5O43286 388 aa21.12■□□□□ 0.97
TM6SF1-201ENST00000258909 WEE2P0C1S8 567 aa21.12■□□□□ 0.97
TM6SF1-201ENST00000258909 EPCAMP16422 314 aa21.12■□□□□ 0.97
TM6SF1-201ENST00000258909 AMHR2Q16671 573 aa21.12■□□□□ 0.97
TM6SF1-201ENST00000258909 NOTUMQ6P988 496 aa21.12■□□□□ 0.97
TM6SF1-201ENST00000258909 IFNLR1Q8IU57 520 aaPredicted RBP21.12■□□□□ 0.97
TM6SF1-201ENST00000258909 EDAQ92838 391 aa21.12■□□□□ 0.97
TM6SF1-201ENST00000258909 GAD1Q99259 594 aa21.12■□□□□ 0.97
TM6SF1-201ENST00000258909 LLPHQ9BRT6 129 aaKnown RBP21.12■□□□□ 0.97
TM6SF1-201ENST00000258909 KANSL3Q9P2N6 904 aa21.12■□□□□ 0.97
TM6SF1-201ENST00000258909 FAN1Q9Y2M0 1017 aa21.12■□□□□ 0.97
TM6SF1-201ENST00000258909 NRP1O14786 923 aa21.11■□□□□ 0.97
TM6SF1-201ENST00000258909 ALDH2P05091 517 aa21.11■□□□□ 0.97
TM6SF1-201ENST00000258909 ARF4P18085 180 aaPredicted RBP21.11■□□□□ 0.97
TM6SF1-201ENST00000258909 AXLP30530 894 aa21.11■□□□□ 0.97
TM6SF1-201ENST00000258909 MLH1P40692 756 aa21.11■□□□□ 0.97
TM6SF1-201ENST00000258909 NCBP1Q09161 790 aaKnown RBP21.11■□□□□ 0.97
TM6SF1-201ENST00000258909 CNNM3Q8NE01 707 aa21.11■□□□□ 0.97
TM6SF1-201ENST00000258909 ZFP42Q96MM3 310 aa21.11■□□□□ 0.97
TM6SF1-201ENST00000258909 CSRNP2Q9H175 543 aa21.11■□□□□ 0.97
TM6SF1-201ENST00000258909 TSHZ2Q9NRE2 1034 aa21.11■□□□□ 0.97
TM6SF1-201ENST00000258909 PRG3Q9Y2Y8 225 aaPredicted RBP21.11■□□□□ 0.97
TM6SF1-201ENST00000258909 ARL5CA6NH57 179 aa21.1■□□□□ 0.97
TM6SF1-201ENST00000258909 OR52Z1P0C646 297 aa21.1■□□□□ 0.97
TM6SF1-201ENST00000258909 XRCC6P12956 609 aaKnown RBP eCLIP21.1■□□□□ 0.97
TM6SF1-201ENST00000258909 POU5F1BQ06416 359 aa21.1■□□□□ 0.97
TM6SF1-201ENST00000258909 GNL2Q13823 731 aaKnown RBP21.1■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms