RNA–Protein interactions for RNA: ENST00000258052.7

SMPD2-201, Transcript of sphingomyelin phosphodiesterase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPD2, Length 1,645 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD2-201ENST00000258052 LMBR1Q8WVP7 490 aa23.18■■□□□ 1.3
SMPD2-201ENST00000258052 POMGNT1Q8WZA1 660 aa23.18■■□□□ 1.3
SMPD2-201ENST00000258052 BORCS6Q96GS4 357 aa23.18■■□□□ 1.3
SMPD2-201ENST00000258052 UPF3AQ9H1J1 476 aaKnown RBP23.18■■□□□ 1.3
SMPD2-201ENST00000258052 EIF2AK3Q9NZJ5 1116 aaKnown RBP23.18■■□□□ 1.3
SMPD2-201ENST00000258052 USP20Q9Y2K6 914 aa23.18■■□□□ 1.3
SMPD2-201ENST00000258052 NRCAMQ92823 1304 aa23.17■■□□□ 1.3
SMPD2-201ENST00000258052 KLK7P49862 253 aa23.17■■□□□ 1.3
SMPD2-201ENST00000258052 ADKP55263 362 aaKnown RBP23.17■■□□□ 1.3
SMPD2-201ENST00000258052 CCDC155Q8N6L0 562 aa23.17■■□□□ 1.3
SMPD2-201ENST00000258052 ZSWIM2Q8NEG5 633 aa23.17■■□□□ 1.3
SMPD2-201ENST00000258052 TSKSQ9UJT2 592 aa23.17■■□□□ 1.3
SMPD2-201ENST00000258052 GOLGA8IPA6NC78 632 aa23.16■■□□□ 1.3
SMPD2-201ENST00000258052 GOLGA8JA6NMD2 632 aa23.16■■□□□ 1.3
SMPD2-201ENST00000258052 AKR1B15C9JRZ8 316 aaPredicted RBP23.16■■□□□ 1.3
SMPD2-201ENST00000258052 KPNA6O60684 536 aa23.16■■□□□ 1.3
SMPD2-201ENST00000258052 AFPP02771 609 aaKnown RBP23.16■■□□□ 1.3
SMPD2-201ENST00000258052 GYPCP04921 128 aa23.16■■□□□ 1.3
SMPD2-201ENST00000258052 CASP14P31944 242 aa23.16■■□□□ 1.3
SMPD2-201ENST00000258052 NFRKBQ6P4R8 1299 aa23.16■■□□□ 1.3
SMPD2-201ENST00000258052 PXYLP1Q8TE99 480 aa23.16■■□□□ 1.3
SMPD2-201ENST00000258052 SAAL1Q96ER3 474 aa23.16■■□□□ 1.3
SMPD2-201ENST00000258052 MAP7D2Q96T17 732 aa23.16■■□□□ 1.3
SMPD2-201ENST00000258052 PPP1R16BQ96T49 567 aa23.16■■□□□ 1.3
SMPD2-201ENST00000258052 CCDC113Q9H0I3 377 aa23.16■■□□□ 1.3
SMPD2-201ENST00000258052 XPNPEP3Q9NQH7 507 aa23.16■■□□□ 1.3
SMPD2-201ENST00000258052 ESPNB1AK53 854 aa23.15■■□□□ 1.3
SMPD2-201ENST00000258052 PIGRP01833 764 aa23.15■■□□□ 1.3
SMPD2-201ENST00000258052 VTNP04004 478 aa23.15■■□□□ 1.3
SMPD2-201ENST00000258052 KRT13P13646 458 aa23.15■■□□□ 1.3
SMPD2-201ENST00000258052 GARTP22102 1010 aa23.15■■□□□ 1.3
SMPD2-201ENST00000258052 TC2NQ8N9U0 490 aa23.15■■□□□ 1.3
SMPD2-201ENST00000258052 SLC35C1Q96A29 364 aa23.15■■□□□ 1.3
SMPD2-201ENST00000258052 TARS2Q9BW92 718 aaKnown RBP23.15■■□□□ 1.3
SMPD2-201ENST00000258052 ZEB2O60315 1214 aa23.15■■□□□ 1.3
SMPD2-201ENST00000258052 EDN1P05305 212 aa23.15■■□□□ 1.3
SMPD2-201ENST00000258052 PRKCBP05771 671 aa23.15■■□□□ 1.3
SMPD2-201ENST00000258052 MSNP26038 577 aaKnown RBP23.15■■□□□ 1.3
SMPD2-201ENST00000258052 MAPK6Q16659 721 aa23.15■■□□□ 1.3
SMPD2-201ENST00000258052 MTG1Q9BT17 334 aaPredicted RBP23.15■■□□□ 1.3
SMPD2-201ENST00000258052 BEGAINQ9BUH8 593 aa23.15■■□□□ 1.3
SMPD2-201ENST00000258052 SIK3Q9Y2K2 1263 aa23.15■■□□□ 1.3
SMPD2-201ENST00000258052 INO80B-WBP1J3KQ70 363 aa23.14■■□□□ 1.29
SMPD2-201ENST00000258052 MFAP3LO75121 409 aa23.14■■□□□ 1.29
SMPD2-201ENST00000258052 MYCNP04198 464 aaPredicted RBP23.14■■□□□ 1.29
SMPD2-201ENST00000258052 TRIM21P19474 475 aaKnown RBP23.14■■□□□ 1.29
SMPD2-201ENST00000258052 MATR3P43243 847 aaKnown RBP eCLIP23.14■■□□□ 1.29
SMPD2-201ENST00000258052 FXR1P51114 621 aaKnown RBP eCLIP23.14■■□□□ 1.29
SMPD2-201ENST00000258052 PTENP60484 403 aa23.14■■□□□ 1.29
SMPD2-201ENST00000258052 BFSP1Q12934 665 aa23.14■■□□□ 1.29
SMPD2-201ENST00000258052 MAP3K21Q5TCX8 1036 aa23.14■■□□□ 1.29
SMPD2-201ENST00000258052 INTS8Q75QN2 995 aaKnown RBP23.14■■□□□ 1.29
SMPD2-201ENST00000258052 NUP58Q9BVL2 599 aa23.14■■□□□ 1.29
SMPD2-201ENST00000258052 MRPL4Q9BYD3 311 aaKnown RBP23.14■■□□□ 1.29
SMPD2-201ENST00000258052 INO80BQ9C086 356 aaPredicted RBP23.14■■□□□ 1.29
SMPD2-201ENST00000258052 MMRN2Q9H8L6 949 aa23.14■■□□□ 1.29
SMPD2-201ENST00000258052 A0A087WZ62 844 aa23.13■■□□□ 1.29
SMPD2-201ENST00000258052 MAPK13O15264 365 aa23.13■■□□□ 1.29
SMPD2-201ENST00000258052 MSCO60682 206 aa23.13■■□□□ 1.29
SMPD2-201ENST00000258052 ADAMTS4O75173 837 aa23.13■■□□□ 1.29
SMPD2-201ENST00000258052 TRIM49P0CI25 452 aa23.13■■□□□ 1.29
SMPD2-201ENST00000258052 TRIM49CP0CI26 452 aa23.13■■□□□ 1.29
SMPD2-201ENST00000258052 SKILP12757 684 aa23.13■■□□□ 1.29
SMPD2-201ENST00000258052 PHKA2P46019 1235 aa23.13■■□□□ 1.29
SMPD2-201ENST00000258052 PRMT2P55345 433 aa23.13■■□□□ 1.29
SMPD2-201ENST00000258052 NKX3-2P78367 333 aa23.13■■□□□ 1.29
SMPD2-201ENST00000258052 CCZ1BP86790 482 aa23.13■■□□□ 1.29
SMPD2-201ENST00000258052 CCZ1P86791 482 aaPredicted RBP23.13■■□□□ 1.29
SMPD2-201ENST00000258052 MAP2K1Q02750 393 aaPredicted RBP23.13■■□□□ 1.29
SMPD2-201ENST00000258052 SNRNP35Q16560 246 aaKnown RBP23.13■■□□□ 1.29
SMPD2-201ENST00000258052 SLFN12LQ6IEE8 588 aa23.13■■□□□ 1.29
SMPD2-201ENST00000258052 CBWD2Q8IUF1 395 aa23.13■■□□□ 1.29
SMPD2-201ENST00000258052 KIAA0319LQ8IZA0 1049 aa23.13■■□□□ 1.29
SMPD2-201ENST00000258052 GPD1LQ8N335 351 aa23.13■■□□□ 1.29
SMPD2-201ENST00000258052 FDXACB1Q9BRP7 624 aaPredicted RBP23.13■■□□□ 1.29
SMPD2-201ENST00000258052 FAM49AQ9H0Q0 323 aaPredicted RBP23.13■■□□□ 1.29
SMPD2-201ENST00000258052 ANKFY1Q9P2R3 1169 aa23.13■■□□□ 1.29
SMPD2-201ENST00000258052 PYCARDQ9ULZ3 195 aa23.13■■□□□ 1.29
SMPD2-201ENST00000258052 STYXL1Q9Y6J8 313 aa23.13■■□□□ 1.29
SMPD2-201ENST00000258052 NRDCO43847 1150 aa23.12■■□□□ 1.29
SMPD2-201ENST00000258052 ADRB2P07550 413 aa23.12■■□□□ 1.29
SMPD2-201ENST00000258052 CYP2C9P11712 490 aa23.12■■□□□ 1.29
SMPD2-201ENST00000258052 POU5F1BQ06416 359 aa23.12■■□□□ 1.29
SMPD2-201ENST00000258052 KCNMA1Q12791 1236 aa23.12■■□□□ 1.29
SMPD2-201ENST00000258052 HIC1Q14526 733 aa23.12■■□□□ 1.29
SMPD2-201ENST00000258052 CXCL17Q6UXB2 119 aa23.12■■□□□ 1.29
SMPD2-201ENST00000258052 CNGA4Q8IV77 575 aa23.12■■□□□ 1.29
SMPD2-201ENST00000258052 C7orf31Q8N865 590 aa23.12■■□□□ 1.29
SMPD2-201ENST00000258052 NLRP7Q8WX94 980 aa23.12■■□□□ 1.29
SMPD2-201ENST00000258052 ZBTB45Q96K62 511 aaPredicted RBP23.12■■□□□ 1.29
SMPD2-201ENST00000258052 SCLT1Q96NL6 688 aa23.12■■□□□ 1.29
SMPD2-201ENST00000258052 CRACR2AQ9BSW2 395 aa23.12■■□□□ 1.29
SMPD2-201ENST00000258052 NFKBIZQ9BYH8 718 aa23.12■■□□□ 1.29
SMPD2-201ENST00000258052 FAM207AQ9NSI2 230 aaPredicted RBP23.12■■□□□ 1.29
SMPD2-201ENST00000258052 HDAC6Q9UBN7 1215 aa23.12■■□□□ 1.29
SMPD2-201ENST00000258052 DDX20Q9UHI6 824 aaKnown RBP23.12■■□□□ 1.29
SMPD2-201ENST00000258052 TTC26A0AVF1 554 aa23.11■■□□□ 1.29
SMPD2-201ENST00000258052 C17orf102A2RUQ5 167 aa23.11■■□□□ 1.29
SMPD2-201ENST00000258052 MBLAC1A4D2B0 266 aaPredicted RBP23.11■■□□□ 1.29
SMPD2-201ENST00000258052 RNF225M0QZC1 329 aaPredicted RBP23.11■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms