RNA–Protein interactions for RNA: ENST00000257765.9

KHDC1-201, Transcript of KH domain containing 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene KHDC1, Length 1,134 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KHDC1-201ENST00000257765 RSAD1Q9HA92 442 aa20.67■□□□□ 0.9
KHDC1-201ENST00000257765 PPME1Q9Y570 386 aa20.67■□□□□ 0.9
KHDC1-201ENST00000257765 CNTNAP2Q9UHC6 1331 aa20.67■□□□□ 0.9
KHDC1-201ENST00000257765 CCDC194A0A1B0GVG4 234 aa20.66■□□□□ 0.9
KHDC1-201ENST00000257765 H0Y858 1186 aa20.66■□□□□ 0.9
KHDC1-201ENST00000257765 EPB41L2O43491 1005 aaKnown RBP20.66■□□□□ 0.9
KHDC1-201ENST00000257765 RFC5P40937 340 aa20.66■□□□□ 0.9
KHDC1-201ENST00000257765 NEK8Q86SG6 692 aa20.66■□□□□ 0.9
KHDC1-201ENST00000257765 FAM193BQ96PV7 902 aaPredicted RBP20.66■□□□□ 0.9
KHDC1-201ENST00000257765 LARP6Q9BRS8 491 aaKnown RBP20.66■□□□□ 0.9
KHDC1-201ENST00000257765 TMEM175Q9BSA9 504 aa20.66■□□□□ 0.9
KHDC1-201ENST00000257765 DHX33Q9H6R0 707 aaKnown RBP20.66■□□□□ 0.9
KHDC1-201ENST00000257765 KCNMB3Q9NPA1 279 aa20.66■□□□□ 0.9
KHDC1-201ENST00000257765 LIMD1Q9UGP4 676 aa20.66■□□□□ 0.9
KHDC1-201ENST00000257765 KCNJ14Q9UNX9 436 aa20.66■□□□□ 0.9
KHDC1-201ENST00000257765 USP34Q70CQ2 3546 aa20.66■□□□□ 0.9
KHDC1-201ENST00000257765 TDRD15B5MCY1 1934 aaKnown RBP20.65■□□□□ 0.9
KHDC1-201ENST00000257765 DDHD2O94830 711 aa20.65■□□□□ 0.9
KHDC1-201ENST00000257765 P4HBP07237 508 aaKnown RBP20.65■□□□□ 0.9
KHDC1-201ENST00000257765 GCFC2P16383 781 aaKnown RBP20.65■□□□□ 0.9
KHDC1-201ENST00000257765 CCDC149Q6ZUS6 474 aa20.65■□□□□ 0.9
KHDC1-201ENST00000257765 MRPL10Q7Z7H8 261 aaKnown RBP20.65■□□□□ 0.9
KHDC1-201ENST00000257765 TMEM105Q8N8V8 129 aa20.65■□□□□ 0.9
KHDC1-201ENST00000257765 ZNF579Q8NAF0 562 aaKnown RBP20.65■□□□□ 0.9
KHDC1-201ENST00000257765 TMEM143Q96AN5 459 aa20.65■□□□□ 0.9
KHDC1-201ENST00000257765 KLHL5Q96PQ7 755 aa20.65■□□□□ 0.9
KHDC1-201ENST00000257765 MINDY3Q9H8M7 445 aa20.65■□□□□ 0.9
KHDC1-201ENST00000257765 BMP2KQ9NSY1 1161 aaPredicted RBP20.65■□□□□ 0.9
KHDC1-201ENST00000257765 KANSL3Q9P2N6 904 aa20.65■□□□□ 0.9
KHDC1-201ENST00000257765 WRAP73Q9P2S5 460 aaPredicted RBP20.65■□□□□ 0.9
KHDC1-201ENST00000257765 GAS2O43903 313 aaKnown RBP20.64■□□□□ 0.89
KHDC1-201ENST00000257765 SSBP05455 408 aaKnown RBP eCLIP20.64■□□□□ 0.89
KHDC1-201ENST00000257765 SRGAP2CP0DJJ0 459 aa20.64■□□□□ 0.89
KHDC1-201ENST00000257765 KLRC2P26717 231 aa20.64■□□□□ 0.89
KHDC1-201ENST00000257765 CLCN4P51793 760 aa20.64■□□□□ 0.89
KHDC1-201ENST00000257765 LAMTOR4Q0VGL1 99 aa20.64■□□□□ 0.89
KHDC1-201ENST00000257765 UBXN11Q5T124 520 aa20.64■□□□□ 0.89
KHDC1-201ENST00000257765 PPP4R3AQ6IN85 833 aa20.64■□□□□ 0.89
KHDC1-201ENST00000257765 GPR149Q86SP6 731 aa20.64■□□□□ 0.89
KHDC1-201ENST00000257765 PRPF31Q8WWY3 499 aaKnown RBP20.64■□□□□ 0.89
KHDC1-201ENST00000257765 ACSF2Q96CM8 615 aaPredicted RBP20.64■□□□□ 0.89
KHDC1-201ENST00000257765 LXNQ9BS40 222 aa20.64■□□□□ 0.89
KHDC1-201ENST00000257765 PHF20Q9BVI0 1012 aa20.64■□□□□ 0.89
KHDC1-201ENST00000257765 TM6SF1Q9BZW5 370 aa20.64■□□□□ 0.89
KHDC1-201ENST00000257765 MFSD1Q9H3U5 465 aa20.64■□□□□ 0.89
KHDC1-201ENST00000257765 FAN1Q9Y2M0 1017 aa20.64■□□□□ 0.89
KHDC1-201ENST00000257765 TBX3O15119 743 aa20.63■□□□□ 0.89
KHDC1-201ENST00000257765 CDKL5O76039 1030 aa20.63■□□□□ 0.89
KHDC1-201ENST00000257765 ALDH2P05091 517 aa20.63■□□□□ 0.89
KHDC1-201ENST00000257765 CNPP09543 421 aaKnown RBP20.63■□□□□ 0.89
KHDC1-201ENST00000257765 HOXA11P31270 313 aaPredicted RBP20.63■□□□□ 0.89
KHDC1-201ENST00000257765 AFF1P51825 1210 aaKnown RBP20.63■□□□□ 0.89
KHDC1-201ENST00000257765 EMC2Q15006 297 aa20.63■□□□□ 0.89
KHDC1-201ENST00000257765 C4orf19Q8IY42 314 aa20.63■□□□□ 0.89
KHDC1-201ENST00000257765 RNF149Q8NC42 400 aa20.63■□□□□ 0.89
KHDC1-201ENST00000257765 FEZF2Q8TBJ5 459 aa20.63■□□□□ 0.89
KHDC1-201ENST00000257765 TCP11Q8WWU5 503 aa20.63■□□□□ 0.89
KHDC1-201ENST00000257765 NAP1L4Q99733 375 aaKnown RBP20.63■□□□□ 0.89
KHDC1-201ENST00000257765 MRPL17Q9NRX2 175 aaKnown RBP20.63■□□□□ 0.89
KHDC1-201ENST00000257765 STK36Q9NRP7 1315 aa20.62■□□□□ 0.89
KHDC1-201ENST00000257765 NRP1O14786 923 aa20.62■□□□□ 0.89
KHDC1-201ENST00000257765 MARCH6O60337 910 aa20.62■□□□□ 0.89
KHDC1-201ENST00000257765 CCNT1O60563 726 aaKnown RBP20.62■□□□□ 0.89
KHDC1-201ENST00000257765 ERLIN2O94905 339 aa20.62■□□□□ 0.89
KHDC1-201ENST00000257765 POMCP01189 267 aa20.62■□□□□ 0.89
KHDC1-201ENST00000257765 URODP06132 367 aa20.62■□□□□ 0.89
KHDC1-201ENST00000257765 XBP1P17861 261 aa20.62■□□□□ 0.89
KHDC1-201ENST00000257765 NCLP19338 710 aaKnown RBP20.62■□□□□ 0.89
KHDC1-201ENST00000257765 YWHABP31946 246 aaKnown RBP20.62■□□□□ 0.89
KHDC1-201ENST00000257765 EPHA7Q15375 998 aa20.62■□□□□ 0.89
KHDC1-201ENST00000257765 ASTLQ6HA08 431 aaPredicted RBP20.62■□□□□ 0.89
KHDC1-201ENST00000257765 OTUD6AQ7L8S5 288 aa20.62■□□□□ 0.89
KHDC1-201ENST00000257765 OTOP3Q7RTS5 596 aa20.62■□□□□ 0.89
KHDC1-201ENST00000257765 FERMT3Q86UX7 667 aa20.62■□□□□ 0.89
KHDC1-201ENST00000257765 CNNM3Q8NE01 707 aa20.62■□□□□ 0.89
KHDC1-201ENST00000257765 PDRG1Q9NUG6 133 aa20.62■□□□□ 0.89
KHDC1-201ENST00000257765 ASAP2O43150 1006 aa20.61■□□□□ 0.89
KHDC1-201ENST00000257765 LILRB3O75022 631 aa20.61■□□□□ 0.89
KHDC1-201ENST00000257765 SOD2P04179 222 aa20.61■□□□□ 0.89
KHDC1-201ENST00000257765 NCAPH2Q6IBW4 605 aa20.61■□□□□ 0.89
KHDC1-201ENST00000257765 C15orf39Q6ZRI6 1047 aa20.61■□□□□ 0.89
KHDC1-201ENST00000257765 PIK3AP1Q6ZUJ8 805 aa20.61■□□□□ 0.89
KHDC1-201ENST00000257765 POTEDQ86YR6 584 aa20.61■□□□□ 0.89
KHDC1-201ENST00000257765 HAS1Q92839 578 aa20.61■□□□□ 0.89
KHDC1-201ENST00000257765 MTRQ99707 1265 aa20.61■□□□□ 0.89
KHDC1-201ENST00000257765 HERC2P3Q9BVR0 1158 aa20.61■□□□□ 0.89
KHDC1-201ENST00000257765 UBN1Q9NPG3 1134 aa20.61■□□□□ 0.89
KHDC1-201ENST00000257765 MARCH5Q9NX47 278 aa20.61■□□□□ 0.89
KHDC1-201ENST00000257765 PROB1E7EW31 1015 aa20.6■□□□□ 0.89
KHDC1-201ENST00000257765 ITGA4P13612 1032 aa20.6■□□□□ 0.89
KHDC1-201ENST00000257765 SCRN1Q12765 414 aa20.6■□□□□ 0.89
KHDC1-201ENST00000257765 XKR9Q5GH70 373 aa20.6■□□□□ 0.89
KHDC1-201ENST00000257765 SMG8Q8ND04 991 aaKnown RBP20.6■□□□□ 0.89
KHDC1-201ENST00000257765 DYDC2Q96IM9 177 aa20.6■□□□□ 0.89
KHDC1-201ENST00000257765 ZSWIM4Q9H7M6 989 aa20.6■□□□□ 0.89
KHDC1-201ENST00000257765 RGL1Q9NZL6 768 aa20.6■□□□□ 0.89
KHDC1-201ENST00000257765 SSX2IPQ9Y2D8 614 aa20.6■□□□□ 0.89
KHDC1-201ENST00000257765 PRG3Q9Y2Y8 225 aaPredicted RBP20.6■□□□□ 0.89
KHDC1-201ENST00000257765 IPPQ9Y573 584 aa20.6■□□□□ 0.89
KHDC1-201ENST00000257765 C2CD2LO14523 706 aa20.59■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms