RNA–Protein interactions for RNA: ENST00000253251.12

UBE4B-201, Transcript of ubiquitination factor E4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE4B, Length 4,772 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-201ENST00000253251 TRIM49P0CI25 452 aa16.06■□□□□ 0.16
UBE4B-201ENST00000253251 TRIM49CP0CI26 452 aa16.06■□□□□ 0.16
UBE4B-201ENST00000253251 ELF1P32519 619 aa16.06■□□□□ 0.16
UBE4B-201ENST00000253251 PPP2R5DQ14738 602 aa16.06■□□□□ 0.16
UBE4B-201ENST00000253251 ARID5BQ14865 1188 aa16.06■□□□□ 0.16
UBE4B-201ENST00000253251 GEN1Q17RS7 908 aa16.06■□□□□ 0.16
UBE4B-201ENST00000253251 SYN2Q92777 582 aaPredicted RBP16.06■□□□□ 0.16
UBE4B-201ENST00000253251 FBXO28Q9NVF7 368 aa16.06■□□□□ 0.16
UBE4B-201ENST00000253251 KBTBD4Q9NVX7 518 aa16.06■□□□□ 0.16
UBE4B-201ENST00000253251 STAP1Q9ULZ2 295 aa16.06■□□□□ 0.16
UBE4B-201ENST00000253251 KRT7P08729 469 aa16.06■□□□□ 0.16
UBE4B-201ENST00000253251 VCAM1P19320 739 aa16.06■□□□□ 0.16
UBE4B-201ENST00000253251 SLC26A2P50443 739 aa16.06■□□□□ 0.16
UBE4B-201ENST00000253251 DARS2Q6PI48 645 aaKnown RBP16.06■□□□□ 0.16
UBE4B-201ENST00000253251 SYNJ2BP-COX16A0A087WUM0 186 aa16.05■□□□□ 0.16
UBE4B-201ENST00000253251 CAV1Q03135 178 aa16.05■□□□□ 0.16
UBE4B-201ENST00000253251 GRB10Q13322 594 aa16.05■□□□□ 0.16
UBE4B-201ENST00000253251 NBPF9Q3BBW0 867 aa16.05■□□□□ 0.16
UBE4B-201ENST00000253251 COX16Q9P0S2 106 aa16.05■□□□□ 0.16
UBE4B-201ENST00000253251 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.05■□□□□ 0.16
UBE4B-201ENST00000253251 TOB1P50616 345 aaPredicted RBP16.05■□□□□ 0.16
UBE4B-201ENST00000253251 RBP5P82980 135 aa16.05■□□□□ 0.16
UBE4B-201ENST00000253251 ARHGEF18Q6ZSZ5 1173 aa16.05■□□□□ 0.16
UBE4B-201ENST00000253251 ZKSCAN4Q969J2 545 aaPredicted RBP16.05■□□□□ 0.16
UBE4B-201ENST00000253251 TNIP3Q96KP6 325 aa16.05■□□□□ 0.16
UBE4B-201ENST00000253251 NALCNQ8IZF0 1738 aa16.05■□□□□ 0.16
UBE4B-201ENST00000253251 NPHP3-ACAD11A0A0J9YXS1 232 aa16.05■□□□□ 0.16
UBE4B-201ENST00000253251 SLC37A4O43826 429 aa16.05■□□□□ 0.16
UBE4B-201ENST00000253251 ERGIC2Q96RQ1 377 aa16.05■□□□□ 0.16
UBE4B-201ENST00000253251 AGPAT1Q99943 283 aa16.05■□□□□ 0.16
UBE4B-201ENST00000253251 DDX56Q9NY93 547 aaKnown RBP16.05■□□□□ 0.16
UBE4B-201ENST00000253251 WDR35Q9P2L0 1181 aa16.05■□□□□ 0.16
UBE4B-201ENST00000253251 KRT10P13645 584 aa16.05■□□□□ 0.16
UBE4B-201ENST00000253251 YWHAGP61981 247 aaKnown RBP eCLIP16.05■□□□□ 0.16
UBE4B-201ENST00000253251 ITKQ08881 620 aa16.05■□□□□ 0.16
UBE4B-201ENST00000253251 SNRNP35Q16560 246 aaKnown RBP16.05■□□□□ 0.16
UBE4B-201ENST00000253251 PRAMEF18Q5VWM3 479 aa16.05■□□□□ 0.16
UBE4B-201ENST00000253251 ZNF564Q8TBZ8 553 aaPredicted RBP16.05■□□□□ 0.16
UBE4B-201ENST00000253251 GDAP1L1Q96MZ0 367 aa16.05■□□□□ 0.16
UBE4B-201ENST00000253251 LRRC4BQ9NT99 713 aa16.05■□□□□ 0.16
UBE4B-201ENST00000253251 PPP1R3GB7ZBB8 358 aa16.04■□□□□ 0.16
UBE4B-201ENST00000253251 WNT10BO00744 389 aa16.04■□□□□ 0.16
UBE4B-201ENST00000253251 CIB2O75838 187 aa16.04■□□□□ 0.16
UBE4B-201ENST00000253251 INHBAP08476 426 aa16.04■□□□□ 0.16
UBE4B-201ENST00000253251 GFPT1Q06210 699 aaPredicted RBP16.04■□□□□ 0.16
UBE4B-201ENST00000253251 DGKDQ16760 1214 aa16.04■□□□□ 0.16
UBE4B-201ENST00000253251 SGSM1Q2NKQ1 1148 aa16.04■□□□□ 0.16
UBE4B-201ENST00000253251 CCDC62Q6P9F0 684 aa16.04■□□□□ 0.16
UBE4B-201ENST00000253251 RAET1EQ8TD07 263 aa16.04■□□□□ 0.16
UBE4B-201ENST00000253251 PGBD4Q96DM1 585 aa16.04■□□□□ 0.16
UBE4B-201ENST00000253251 RTN2O75298 545 aa16.04■□□□□ 0.16
UBE4B-201ENST00000253251 CELF2O95319 508 aaKnown RBP16.04■□□□□ 0.16
UBE4B-201ENST00000253251 MYBPC2Q14324 1141 aa16.04■□□□□ 0.16
UBE4B-201ENST00000253251 KIF12Q96FN5 646 aa16.04■□□□□ 0.16
UBE4B-201ENST00000253251 CCDC68Q9H2F9 335 aa16.04■□□□□ 0.16
UBE4B-201ENST00000253251 PTPN22Q9Y2R2 807 aa16.04■□□□□ 0.16
UBE4B-201ENST00000253251 DYNC1LI2O43237 492 aaPredicted RBP16.04■□□□□ 0.16
UBE4B-201ENST00000253251 FGGP02679 453 aa16.04■□□□□ 0.16
UBE4B-201ENST00000253251 FTLP02792 175 aaPredicted RBP16.04■□□□□ 0.16
UBE4B-201ENST00000253251 DSG3P32926 999 aa16.04■□□□□ 0.16
UBE4B-201ENST00000253251 SLC1A1P43005 524 aa16.04■□□□□ 0.16
UBE4B-201ENST00000253251 RHBDL3P58872 404 aa16.04■□□□□ 0.16
UBE4B-201ENST00000253251 ACTR2P61160 394 aa16.04■□□□□ 0.16
UBE4B-201ENST00000253251 C2orf54Q08AI8 447 aa16.04■□□□□ 0.16
UBE4B-201ENST00000253251 TRIM42Q8IWZ5 723 aa16.04■□□□□ 0.16
UBE4B-201ENST00000253251 PPP4R1Q8TF05 950 aa16.04■□□□□ 0.16
UBE4B-201ENST00000253251 RUBCNQ92622 972 aa16.04■□□□□ 0.16
UBE4B-201ENST00000253251 UNC45AQ9H3U1 944 aa16.04■□□□□ 0.16
UBE4B-201ENST00000253251 PLEKHA4Q9H4M7 779 aa16.04■□□□□ 0.16
UBE4B-201ENST00000253251 GMNNO75496 209 aa16.03■□□□□ 0.16
UBE4B-201ENST00000253251 HOXC6P09630 235 aa16.03■□□□□ 0.16
UBE4B-201ENST00000253251 CPT1AP50416 773 aa16.03■□□□□ 0.16
UBE4B-201ENST00000253251 PLTPP55058 493 aa16.03■□□□□ 0.16
UBE4B-201ENST00000253251 COG7P83436 770 aa16.03■□□□□ 0.16
UBE4B-201ENST00000253251 SLC18A3Q16572 532 aa16.03■□□□□ 0.16
UBE4B-201ENST00000253251 ZNF484Q5JVG2 852 aa16.03■□□□□ 0.16
UBE4B-201ENST00000253251 EFCAB13Q8IY85 973 aa16.03■□□□□ 0.16
UBE4B-201ENST00000253251 CNPY4Q8N129 248 aa16.03■□□□□ 0.16
UBE4B-201ENST00000253251 TMEM8AQ9HCN3 771 aa16.03■□□□□ 0.16
UBE4B-201ENST00000253251 POLD4Q9HCU8 107 aa16.03■□□□□ 0.16
UBE4B-201ENST00000253251 KCNQ5Q9NR82 932 aa16.03■□□□□ 0.16
UBE4B-201ENST00000253251 DISP2A7MBM2 1401 aa16.03■□□□□ 0.16
UBE4B-201ENST00000253251 CHD2O14647 1828 aaKnown RBP16.03■□□□□ 0.16
UBE4B-201ENST00000253251 EXTL3O43909 919 aa16.03■□□□□ 0.16
UBE4B-201ENST00000253251 SDC4P31431 198 aa16.03■□□□□ 0.16
UBE4B-201ENST00000253251 NBPF12Q5TAG4 269 aaPredicted RBP16.03■□□□□ 0.16
UBE4B-201ENST00000253251 VSIG1Q86XK7 387 aa16.03■□□□□ 0.16
UBE4B-201ENST00000253251 C10orf67Q8IYJ2 551 aa16.03■□□□□ 0.16
UBE4B-201ENST00000253251 GCNAQ96QF7 691 aa16.03■□□□□ 0.16
UBE4B-201ENST00000253251 UVRAGQ9P2Y5 699 aa16.03■□□□□ 0.16
UBE4B-201ENST00000253251 MAD1L1Q9Y6D9 718 aa16.03■□□□□ 0.16
UBE4B-201ENST00000253251 TBC1D12O60347 775 aa16.03■□□□□ 0.16
UBE4B-201ENST00000253251 ZBED1O96006 694 aa16.03■□□□□ 0.16
UBE4B-201ENST00000253251 CALRP27797 417 aaKnown RBP16.03■□□□□ 0.16
UBE4B-201ENST00000253251 CXCR5P32302 372 aa16.03■□□□□ 0.16
UBE4B-201ENST00000253251 PCGF5Q86SE9 256 aa16.03■□□□□ 0.16
UBE4B-201ENST00000253251 CCNYQ8ND76 341 aa16.03■□□□□ 0.16
UBE4B-201ENST00000253251 TMEM143Q96AN5 459 aa16.03■□□□□ 0.16
UBE4B-201ENST00000253251 FMO2Q99518 471 aa16.03■□□□□ 0.16
UBE4B-201ENST00000253251 NGRNQ9NPE2 291 aaKnown RBP16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms